RNA–Protein interactions for RNA: ENST00000549578.5

VPS29-206, Transcript of VPS29, retromer complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS29, Length 1,523 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-206ENST00000549578 M0R1W7 72 aa17.39■□□□□ 0.37
VPS29-206ENST00000549578 TOX4O94842 621 aa17.39■□□□□ 0.37
VPS29-206ENST00000549578 CGB3P0DN86 165 aa17.39■□□□□ 0.37
VPS29-206ENST00000549578 CGB7P0DN87 165 aa17.39■□□□□ 0.37
VPS29-206ENST00000549578 MRPS15P82914 257 aaKnown RBP17.39■□□□□ 0.37
VPS29-206ENST00000549578 C17orf58Q2M2W7 97 aa17.39■□□□□ 0.37
VPS29-206ENST00000549578 CNPY1Q3B7I2 92 aa17.39■□□□□ 0.37
VPS29-206ENST00000549578 HACD4Q5VWC8 232 aa17.39■□□□□ 0.37
VPS29-206ENST00000549578 C1orf229Q6ZS94 237 aaPredicted RBP17.39■□□□□ 0.37
VPS29-206ENST00000549578 UBALD1Q8TB05 177 aa17.39■□□□□ 0.37
VPS29-206ENST00000549578 TBX15Q96SF7 602 aa17.39■□□□□ 0.37
VPS29-206ENST00000549578 MMP27Q9H306 513 aa17.39■□□□□ 0.37
VPS29-206ENST00000549578 GAL3ST2Q9H3Q3 398 aa17.39■□□□□ 0.37
VPS29-206ENST00000549578 SIRT7Q9NRC8 400 aa17.39■□□□□ 0.37
VPS29-206ENST00000549578 TAS2R3Q9NYW6 316 aa17.39■□□□□ 0.37
VPS29-206ENST00000549578 CALYQ9NYX4 217 aa17.39■□□□□ 0.37
VPS29-206ENST00000549578 MRPS7Q9Y2R9 242 aaKnown RBP17.39■□□□□ 0.37
VPS29-206ENST00000549578 ZNF729A6NN14 1252 aaPredicted RBP17.38■□□□□ 0.37
VPS29-206ENST00000549578 C17orf98A8MV24 154 aa17.38■□□□□ 0.37
VPS29-206ENST00000549578 MMP23AO75900 390 aa17.38■□□□□ 0.37
VPS29-206ENST00000549578 OMGP23515 440 aa17.38■□□□□ 0.37
VPS29-206ENST00000549578 CNIH2Q6PI25 160 aa17.38■□□□□ 0.37
VPS29-206ENST00000549578 VMO1Q7Z5L0 202 aa17.38■□□□□ 0.37
VPS29-206ENST00000549578 C5orf24Q7Z6I8 188 aa17.38■□□□□ 0.37
VPS29-206ENST00000549578 GCDHQ92947 438 aaPredicted RBP17.38■□□□□ 0.37
VPS29-206ENST00000549578 RIMS4Q9H426 269 aaPredicted RBP17.38■□□□□ 0.37
VPS29-206ENST00000549578 MBNL3Q9NUK0 354 aaKnown RBP17.38■□□□□ 0.37
VPS29-206ENST00000549578 ADAM30Q9UKF2 790 aa17.38■□□□□ 0.37
VPS29-206ENST00000549578 A3GALT2U3KPV4 340 aa17.38■□□□□ 0.37
VPS29-206ENST00000549578 KBTBD11-OT1A0A1B0GTJ5 212 aa17.37■□□□□ 0.37
VPS29-206ENST00000549578 MNDAP41218 407 aa17.37■□□□□ 0.37
VPS29-206ENST00000549578 GNG2P59768 71 aa17.37■□□□□ 0.37
VPS29-206ENST00000549578 PNLIPRP3Q17RR3 467 aa17.37■□□□□ 0.37
VPS29-206ENST00000549578 PRAMEF5Q5TYX0 476 aa17.37■□□□□ 0.37
VPS29-206ENST00000549578 ZNF880Q6PDB4 577 aa17.37■□□□□ 0.37
VPS29-206ENST00000549578 ZNF782Q6ZMW2 699 aaPredicted RBP17.37■□□□□ 0.37
VPS29-206ENST00000549578 C1orf122Q6ZSJ8 110 aa17.37■□□□□ 0.37
VPS29-206ENST00000549578 RFESDQ8TAC1 157 aa17.37■□□□□ 0.37
VPS29-206ENST00000549578 METTL8Q9H825 291 aaKnown RBP17.37■□□□□ 0.37
VPS29-206ENST00000549578 TRBV6-6A0A0A6YYG2 114 aa17.37■□□□□ 0.37
VPS29-206ENST00000549578 C12orf77C9JDV5 145 aa17.37■□□□□ 0.37
VPS29-206ENST00000549578 C15orf65H3BRN8 121 aa17.37■□□□□ 0.37
VPS29-206ENST00000549578 SSX5O60225 188 aa17.37■□□□□ 0.37
VPS29-206ENST00000549578 CLPXO76031 633 aa17.37■□□□□ 0.37
VPS29-206ENST00000549578 HLA-DQB1P01920 261 aa17.37■□□□□ 0.37
VPS29-206ENST00000549578 MELTFP08582 738 aa17.37■□□□□ 0.37
VPS29-206ENST00000549578 FCGR3AP08637 254 aa17.37■□□□□ 0.37
VPS29-206ENST00000549578 GZMHP20718 246 aa17.37■□□□□ 0.37
VPS29-206ENST00000549578 TALDO1P37837 337 aa17.37■□□□□ 0.37
VPS29-206ENST00000549578 GDNFP39905 211 aa17.37■□□□□ 0.37
VPS29-206ENST00000549578 C6orf183Q5T699 404 aa17.37■□□□□ 0.37
VPS29-206ENST00000549578 IL17RELQ6ZVW7 336 aa17.37■□□□□ 0.37
VPS29-206ENST00000549578 PRR18Q8N4B5 295 aa17.37■□□□□ 0.37
VPS29-206ENST00000549578 MAFIPQ8WZ33 124 aa17.37■□□□□ 0.37
VPS29-206ENST00000549578 ARL11Q969Q4 196 aa17.37■□□□□ 0.37
VPS29-206ENST00000549578 DIRAS2Q96HU8 199 aa17.37■□□□□ 0.37
VPS29-206ENST00000549578 TAF9BQ9HBM6 251 aa17.37■□□□□ 0.37
VPS29-206ENST00000549578 ZNF230Q9UIE0 474 aaPredicted RBP17.37■□□□□ 0.37
VPS29-206ENST00000549578 HIVEP2P31629 2446 aa17.36■□□□□ 0.37
VPS29-206ENST00000549578 hCG_1809904A0A1W2PP81 198 aa17.36■□□□□ 0.37
VPS29-206ENST00000549578 A0A1W2PPE2 198 aa17.36■□□□□ 0.37
VPS29-206ENST00000549578 A0A1W2PR64 198 aa17.36■□□□□ 0.37
VPS29-206ENST00000549578 A0A1W2PRV1 198 aa17.36■□□□□ 0.37
VPS29-206ENST00000549578 IGHV1-8P0DP01 117 aa17.36■□□□□ 0.37
VPS29-206ENST00000549578 TNFSF8P32971 234 aa17.36■□□□□ 0.37
VPS29-206ENST00000549578 LTC4SQ16873 150 aa17.36■□□□□ 0.37
VPS29-206ENST00000549578 FAM120AOSQ5T036 256 aa17.36■□□□□ 0.37
VPS29-206ENST00000549578 BAIAP2L2Q6UXY1 529 aa17.36■□□□□ 0.37
VPS29-206ENST00000549578 MOB1BQ7L9L4 216 aa17.36■□□□□ 0.37
VPS29-206ENST00000549578 SNX29P2Q8IUI4 249 aa17.36■□□□□ 0.37
VPS29-206ENST00000549578 UPRTQ96BW1 309 aa17.36■□□□□ 0.37
VPS29-206ENST00000549578 Q9N2K0 584 aa17.36■□□□□ 0.37
VPS29-206ENST00000549578 KCNIP1Q9NZI2 227 aa17.36■□□□□ 0.37
VPS29-206ENST00000549578 ANK3Q12955 4377 aaKnown RBP17.35■□□□□ 0.37
VPS29-206ENST00000549578 NPIPB11E5RHQ5 1161 aa17.35■□□□□ 0.37
VPS29-206ENST00000549578 ORC5O43913 435 aa17.35■□□□□ 0.37
VPS29-206ENST00000549578 RBP4P02753 201 aa17.35■□□□□ 0.37
VPS29-206ENST00000549578 PRTN3P24158 256 aa17.35■□□□□ 0.37
VPS29-206ENST00000549578 PITPNAQ00169 270 aa17.35■□□□□ 0.37
VPS29-206ENST00000549578 GUCA2AQ02747 115 aa17.35■□□□□ 0.37
VPS29-206ENST00000549578 KLRD1Q13241 179 aa17.35■□□□□ 0.37
VPS29-206ENST00000549578 HEPN1Q6WQI6 88 aa17.35■□□□□ 0.37
VPS29-206ENST00000549578 PDZD9Q8IXQ8 264 aa17.35■□□□□ 0.37
VPS29-206ENST00000549578 OR1L1Q8NH94 360 aa17.35■□□□□ 0.37
VPS29-206ENST00000549578 TEP1Q99973 2627 aaKnown RBP17.34■□□□□ 0.37
VPS29-206ENST00000549578 IGHV3OR16-10A0A075B7F0 116 aa17.34■□□□□ 0.37
VPS29-206ENST00000549578 HBZP02008 142 aa17.34■□□□□ 0.37
VPS29-206ENST00000549578 S100A5P33763 92 aa17.34■□□□□ 0.37
VPS29-206ENST00000549578 HMGN3Q15651 99 aa17.34■□□□□ 0.37
VPS29-206ENST00000549578 TRAT1Q6PIZ9 186 aa17.34■□□□□ 0.37
VPS29-206ENST00000549578 TNFRSF14Q92956 283 aa17.34■□□□□ 0.37
VPS29-206ENST00000549578 LHX4Q969G2 390 aa17.34■□□□□ 0.37
VPS29-206ENST00000549578 KIRREL1Q96J84 757 aa17.34■□□□□ 0.37
VPS29-206ENST00000549578 LINC00574Q9H8X3 128 aa17.34■□□□□ 0.37
VPS29-206ENST00000549578 UNKLQ9H9P5 680 aaKnown RBP17.34■□□□□ 0.37
VPS29-206ENST00000549578 IDI2-AS1Q9NZ38 188 aa17.34■□□□□ 0.37
VPS29-206ENST00000549578 MTORP42345 2549 aa17.33■□□□□ 0.37
VPS29-206ENST00000549578 TRAV40A0A0B4J280 105 aa17.33■□□□□ 0.37
VPS29-206ENST00000549578 MEIOCA2RUB1 952 aa17.33■□□□□ 0.37
VPS29-206ENST00000549578 FAM172BPA6NC97 362 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms