RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 AUNIPQ9H7T9 357 aa17.3■□□□□ 0.36
CACNB3-210ENST00000548874 TRAPPC2LQ9UL33 140 aa17.3■□□□□ 0.36
CACNB3-210ENST00000548874 KBTBD11-OT1A0A1B0GTJ5 212 aa17.29■□□□□ 0.36
CACNB3-210ENST00000548874 TMEM235A6NFC5 223 aa17.29■□□□□ 0.36
CACNB3-210ENST00000548874 FAM25AB3EWG3 89 aa17.29■□□□□ 0.36
CACNB3-210ENST00000548874 FAM25CB3EWG5 89 aa17.29■□□□□ 0.36
CACNB3-210ENST00000548874 FAM25GB3EWG6 89 aa17.29■□□□□ 0.36
CACNB3-210ENST00000548874 TOX4O94842 621 aa17.29■□□□□ 0.36
CACNB3-210ENST00000548874 CD3GP09693 182 aa17.29■□□□□ 0.36
CACNB3-210ENST00000548874 RCC1P18754 421 aaPredicted RBP17.29■□□□□ 0.36
CACNB3-210ENST00000548874 GZMHP20718 246 aa17.29■□□□□ 0.36
CACNB3-210ENST00000548874 PRTN3P24158 256 aa17.29■□□□□ 0.36
CACNB3-210ENST00000548874 TAS2R20P59543 309 aa17.29■□□□□ 0.36
CACNB3-210ENST00000548874 TMEM69Q5SWH9 247 aa17.29■□□□□ 0.36
CACNB3-210ENST00000548874 ZNF554Q86TJ5 538 aa17.29■□□□□ 0.36
CACNB3-210ENST00000548874 DTX3Q8N9I9 347 aa17.29■□□□□ 0.36
CACNB3-210ENST00000548874 METTL8Q9H825 291 aaKnown RBP17.29■□□□□ 0.36
CACNB3-210ENST00000548874 CALYQ9NYX4 217 aa17.29■□□□□ 0.36
CACNB3-210ENST00000548874 ADAM30Q9UKF2 790 aa17.29■□□□□ 0.36
CACNB3-210ENST00000548874 NPIPB11E5RHQ5 1161 aa17.28■□□□□ 0.36
CACNB3-210ENST00000548874 C15orf65H3BRN8 121 aa17.28■□□□□ 0.36
CACNB3-210ENST00000548874 ORC5O43913 435 aa17.28■□□□□ 0.36
CACNB3-210ENST00000548874 CLPXO76031 633 aa17.28■□□□□ 0.36
CACNB3-210ENST00000548874 SSTR5P35346 364 aa17.28■□□□□ 0.36
CACNB3-210ENST00000548874 MNDAP41218 407 aa17.28■□□□□ 0.36
CACNB3-210ENST00000548874 ARFRP1Q13795 201 aa17.28■□□□□ 0.36
CACNB3-210ENST00000548874 KIAA2026Q5HYC2 2103 aa17.28■□□□□ 0.36
CACNB3-210ENST00000548874 C6orf183Q5T699 404 aa17.28■□□□□ 0.36
CACNB3-210ENST00000548874 TRAT1Q6PIZ9 186 aa17.28■□□□□ 0.36
CACNB3-210ENST00000548874 HEPN1Q6WQI6 88 aa17.28■□□□□ 0.36
CACNB3-210ENST00000548874 MOB1BQ7L9L4 216 aa17.28■□□□□ 0.36
CACNB3-210ENST00000548874 VMO1Q7Z5L0 202 aa17.28■□□□□ 0.36
CACNB3-210ENST00000548874 TNFRSF14Q92956 283 aa17.28■□□□□ 0.36
CACNB3-210ENST00000548874 PCGF1Q9BSM1 259 aa17.28■□□□□ 0.36
CACNB3-210ENST00000548874 CHMP1AQ9HD42 196 aaPredicted RBP17.28■□□□□ 0.36
CACNB3-210ENST00000548874 hCG_1809904A0A1W2PP81 198 aa17.27■□□□□ 0.36
CACNB3-210ENST00000548874 A0A1W2PPE2 198 aa17.27■□□□□ 0.36
CACNB3-210ENST00000548874 A0A1W2PR64 198 aa17.27■□□□□ 0.36
CACNB3-210ENST00000548874 A0A1W2PRV1 198 aa17.27■□□□□ 0.36
CACNB3-210ENST00000548874 C12orf77C9JDV5 145 aa17.27■□□□□ 0.36
CACNB3-210ENST00000548874 MMP23AO75900 390 aa17.27■□□□□ 0.36
CACNB3-210ENST00000548874 FSHBP01225 129 aa17.27■□□□□ 0.36
CACNB3-210ENST00000548874 HLA-DQB1P01920 261 aa17.27■□□□□ 0.36
CACNB3-210ENST00000548874 IGHV1-8P0DP01 117 aa17.27■□□□□ 0.36
CACNB3-210ENST00000548874 ERVFRD-1P60508 538 aa17.27■□□□□ 0.36
CACNB3-210ENST00000548874 MRPS15P82914 257 aaKnown RBP17.27■□□□□ 0.36
CACNB3-210ENST00000548874 PITPNAQ00169 270 aa17.27■□□□□ 0.36
CACNB3-210ENST00000548874 CNIH2Q6PI25 160 aa17.27■□□□□ 0.36
CACNB3-210ENST00000548874 NUDCD2Q8WVJ2 157 aa17.27■□□□□ 0.36
CACNB3-210ENST00000548874 Q9N2K0 584 aa17.27■□□□□ 0.36
CACNB3-210ENST00000548874 SIRT7Q9NRC8 400 aa17.27■□□□□ 0.36
CACNB3-210ENST00000548874 EXTL2Q9UBQ6 330 aa17.27■□□□□ 0.36
CACNB3-210ENST00000548874 SSX5O60225 188 aa17.26■□□□□ 0.35
CACNB3-210ENST00000548874 TPPPO94811 219 aa17.26■□□□□ 0.35
CACNB3-210ENST00000548874 FCGR3AP08637 254 aa17.26■□□□□ 0.35
CACNB3-210ENST00000548874 DTYMKP23919 212 aa17.26■□□□□ 0.35
CACNB3-210ENST00000548874 GDNFP39905 211 aa17.26■□□□□ 0.35
CACNB3-210ENST00000548874 GNG2P59768 71 aa17.26■□□□□ 0.35
CACNB3-210ENST00000548874 HMGN3Q15651 99 aa17.26■□□□□ 0.35
CACNB3-210ENST00000548874 CNPY1Q3B7I2 92 aa17.26■□□□□ 0.35
CACNB3-210ENST00000548874 FAM120AOSQ5T036 256 aa17.26■□□□□ 0.35
CACNB3-210ENST00000548874 Q71RC1 249 aaPredicted RBP17.26■□□□□ 0.35
CACNB3-210ENST00000548874 TAF9BQ9HBM6 251 aa17.26■□□□□ 0.35
CACNB3-210ENST00000548874 PTHLHP12272 177 aa17.25■□□□□ 0.35
CACNB3-210ENST00000548874 OMGP23515 440 aa17.25■□□□□ 0.35
CACNB3-210ENST00000548874 TNFSF8P32971 234 aa17.25■□□□□ 0.35
CACNB3-210ENST00000548874 TALDO1P37837 337 aa17.25■□□□□ 0.35
CACNB3-210ENST00000548874 DLX1P56177 255 aa17.25■□□□□ 0.35
CACNB3-210ENST00000548874 SRSF7Q16629 238 aaKnown RBP eCLIP17.25■□□□□ 0.35
CACNB3-210ENST00000548874 KLF17Q5JT82 389 aaPredicted RBP17.25■□□□□ 0.35
CACNB3-210ENST00000548874 PRAMEF5Q5TYX0 476 aa17.25■□□□□ 0.35
CACNB3-210ENST00000548874 HCP5Q6MZN7 132 aa17.25■□□□□ 0.35
CACNB3-210ENST00000548874 OR10A7Q8NGE5 316 aa17.25■□□□□ 0.35
CACNB3-210ENST00000548874 ARL11Q969Q4 196 aa17.25■□□□□ 0.35
CACNB3-210ENST00000548874 KIRREL1Q96J84 757 aa17.25■□□□□ 0.35
CACNB3-210ENST00000548874 KCNIP1Q9NZI2 227 aa17.25■□□□□ 0.35
CACNB3-210ENST00000548874 MGAT4AQ9UM21 535 aa17.25■□□□□ 0.35
CACNB3-210ENST00000548874 SESN1Q9Y6P5 492 aa17.25■□□□□ 0.35
CACNB3-210ENST00000548874 HIVEP2P31629 2446 aa17.25■□□□□ 0.35
CACNB3-210ENST00000548874 F2RL2O00254 374 aa17.24■□□□□ 0.35
CACNB3-210ENST00000548874 HBZP02008 142 aa17.24■□□□□ 0.35
CACNB3-210ENST00000548874 HOXB4P17483 251 aaPredicted RBP17.24■□□□□ 0.35
CACNB3-210ENST00000548874 NCR3LG1Q68D85 454 aa17.24■□□□□ 0.35
CACNB3-210ENST00000548874 ZNF782Q6ZMW2 699 aaPredicted RBP17.24■□□□□ 0.35
CACNB3-210ENST00000548874 Q6ZS49 121 aa17.24■□□□□ 0.35
CACNB3-210ENST00000548874 TEX29Q8N6K0 151 aa17.24■□□□□ 0.35
CACNB3-210ENST00000548874 RFESDQ8TAC1 157 aa17.24■□□□□ 0.35
CACNB3-210ENST00000548874 SETD6Q8TBK2 473 aa17.24■□□□□ 0.35
CACNB3-210ENST00000548874 DIRAS2Q96HU8 199 aa17.24■□□□□ 0.35
CACNB3-210ENST00000548874 RAB9BQ9NP90 201 aa17.24■□□□□ 0.35
CACNB3-210ENST00000548874 IDI2-AS1Q9NZ38 188 aa17.24■□□□□ 0.35
CACNB3-210ENST00000548874 MRPS7Q9Y2R9 242 aaKnown RBP17.24■□□□□ 0.35
CACNB3-210ENST00000548874 RNASEK-C17orf49H0YIS7 233 aa17.23■□□□□ 0.35
CACNB3-210ENST00000548874 HLA-DRB3P79483 266 aa17.23■□□□□ 0.35
CACNB3-210ENST00000548874 BAIAP2L2Q6UXY1 529 aa17.23■□□□□ 0.35
CACNB3-210ENST00000548874 C5orf24Q7Z6I8 188 aa17.23■□□□□ 0.35
CACNB3-210ENST00000548874 OR52M1Q8NGK5 317 aa17.23■□□□□ 0.35
CACNB3-210ENST00000548874 OR1L1Q8NH94 360 aa17.23■□□□□ 0.35
CACNB3-210ENST00000548874 UBALD1Q8TB05 177 aa17.23■□□□□ 0.35
CACNB3-210ENST00000548874 ZNF230Q9UIE0 474 aaPredicted RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms