RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 MRGPRDQ8TDS7 321 aa12.21□□□□□ -0.45
CACNB3-209ENST00000548860 CLDN23Q96B33 292 aa12.21□□□□□ -0.45
CACNB3-209ENST00000548860 AQP10Q96PS8 301 aa12.21□□□□□ -0.45
CACNB3-209ENST00000548860 ARFGEF3Q5TH69 2177 aa12.21□□□□□ -0.45
CACNB3-209ENST00000548860 IGKV1D-13A0A0B4J2D9 117 aa12.21□□□□□ -0.45
CACNB3-209ENST00000548860 KIR2DS1A0A191URI9 304 aa12.21□□□□□ -0.45
CACNB3-209ENST00000548860 IFNA10P01566 189 aa12.21□□□□□ -0.45
CACNB3-209ENST00000548860 IGKV1-13P0DP09 117 aa12.21□□□□□ -0.45
CACNB3-209ENST00000548860 KIR2DS4P43632 304 aa12.21□□□□□ -0.45
CACNB3-209ENST00000548860 KIR2DS1Q14954 304 aa12.21□□□□□ -0.45
CACNB3-209ENST00000548860 TMEM252Q8N6L7 170 aa12.21□□□□□ -0.45
CACNB3-209ENST00000548860 ADGRG7Q96K78 797 aa12.21□□□□□ -0.45
CACNB3-209ENST00000548860 PLEKHF2Q9H8W4 249 aa12.21□□□□□ -0.45
CACNB3-209ENST00000548860 GCM1Q9NP62 436 aa12.21□□□□□ -0.45
CACNB3-209ENST00000548860 IFNA4P05014 189 aa12.21□□□□□ -0.46
CACNB3-209ENST00000548860 OR3A1P47881 315 aa12.21□□□□□ -0.46
CACNB3-209ENST00000548860 TLE4Q04727 773 aa12.21□□□□□ -0.46
CACNB3-209ENST00000548860 C17orf82Q86X59 251 aaPredicted RBP12.21□□□□□ -0.46
CACNB3-209ENST00000548860 FAM58AQ8N1B3 248 aa12.21□□□□□ -0.46
CACNB3-209ENST00000548860 ASB13Q8WXK3 278 aa12.21□□□□□ -0.46
CACNB3-209ENST00000548860 ANGPTL4Q9BY76 406 aa12.21□□□□□ -0.46
CACNB3-209ENST00000548860 OR2J1Q9GZK6 312 aa12.21□□□□□ -0.46
CACNB3-209ENST00000548860 ZNF665Q9H7R5 613 aa12.21□□□□□ -0.46
CACNB3-209ENST00000548860 A0A0U1RQV5 110 aa12.21□□□□□ -0.46
CACNB3-209ENST00000548860 A0A1W2PPQ1 181 aa12.21□□□□□ -0.46
CACNB3-209ENST00000548860 MECP2P51608 486 aaKnown RBP12.21□□□□□ -0.46
CACNB3-209ENST00000548860 ZNF107Q9UII5 783 aaPredicted RBP12.21□□□□□ -0.46
CACNB3-209ENST00000548860 AUP1Q9Y679 476 aa12.21□□□□□ -0.46
CACNB3-209ENST00000548860 CLEC18AA5D8T8 446 aa12.2□□□□□ -0.46
CACNB3-209ENST00000548860 RBFOX3A6NFN3 312 aa12.2□□□□□ -0.46
CACNB3-209ENST00000548860 CLEC18CQ8NCF0 446 aa12.2□□□□□ -0.46
CACNB3-209ENST00000548860 SAT2Q96F10 170 aaPredicted RBP12.2□□□□□ -0.46
CACNB3-209ENST00000548860 C1orf147Q96MC9 270 aaPredicted RBP12.2□□□□□ -0.46
CACNB3-209ENST00000548860 MIOXQ9UGB7 285 aa12.2□□□□□ -0.46
CACNB3-209ENST00000548860 A0A1W2PPE3 182 aa12.2□□□□□ -0.46
CACNB3-209ENST00000548860 KLF7O75840 302 aaPredicted RBP12.2□□□□□ -0.46
CACNB3-209ENST00000548860 SERPINA7P05543 415 aa12.2□□□□□ -0.46
CACNB3-209ENST00000548860 OR8G1Q15617 311 aa12.2□□□□□ -0.46
CACNB3-209ENST00000548860 TIPARPQ7Z3E1 657 aaKnown RBP12.2□□□□□ -0.46
CACNB3-209ENST00000548860 OR4F5Q8NH21 305 aa12.2□□□□□ -0.46
CACNB3-209ENST00000548860 OR4F4Q96R69 305 aa12.2□□□□□ -0.46
CACNB3-209ENST00000548860 TMED3Q9Y3Q3 217 aa12.2□□□□□ -0.46
CACNB3-209ENST00000548860 H3BQ15 152 aa12.2□□□□□ -0.46
CACNB3-209ENST00000548860 FABP4P15090 132 aa12.2□□□□□ -0.46
CACNB3-209ENST00000548860 EGR1P18146 543 aa12.2□□□□□ -0.46
CACNB3-209ENST00000548860 WDR25Q64LD2 544 aaPredicted RBP12.2□□□□□ -0.46
CACNB3-209ENST00000548860 NTNG2Q96CW9 530 aa12.2□□□□□ -0.46
CACNB3-209ENST00000548860 WFIKKN1Q96NZ8 548 aa12.2□□□□□ -0.46
CACNB3-209ENST00000548860 COLQQ9Y215 455 aaPredicted RBP12.2□□□□□ -0.46
CACNB3-209ENST00000548860 NBEAQ8NFP9 2946 aa12.2□□□□□ -0.46
CACNB3-209ENST00000548860 IGSF23A1L1A6 192 aa12.19□□□□□ -0.46
CACNB3-209ENST00000548860 LILRA1O75019 489 aa12.19□□□□□ -0.46
CACNB3-209ENST00000548860 FABP1P07148 127 aa12.19□□□□□ -0.46
CACNB3-209ENST00000548860 TMEM187Q14656 261 aa12.19□□□□□ -0.46
CACNB3-209ENST00000548860 PMS2CLQ68D20 193 aa12.19□□□□□ -0.46
CACNB3-209ENST00000548860 NUFIP2Q7Z417 695 aaKnown RBP12.19□□□□□ -0.46
CACNB3-209ENST00000548860 TMEM37Q8WXS4 190 aa12.19□□□□□ -0.46
CACNB3-209ENST00000548860 OR5B12Q96R08 314 aa12.19□□□□□ -0.46
CACNB3-209ENST00000548860 SPINK4O60575 86 aa12.19□□□□□ -0.46
CACNB3-209ENST00000548860 CD46P15529 392 aa12.19□□□□□ -0.46
CACNB3-209ENST00000548860 RAB5AP20339 215 aa12.19□□□□□ -0.46
CACNB3-209ENST00000548860 PLA2G5P39877 138 aa12.19□□□□□ -0.46
CACNB3-209ENST00000548860 MEOX1P50221 254 aa12.19□□□□□ -0.46
CACNB3-209ENST00000548860 RAB4BP61018 213 aa12.19□□□□□ -0.46
CACNB3-209ENST00000548860 AESQ08117 197 aa12.19□□□□□ -0.46
CACNB3-209ENST00000548860 ZNF561Q8N587 486 aa12.19□□□□□ -0.46
CACNB3-209ENST00000548860 APOBEC3DQ96AK3 386 aaPredicted RBP12.19□□□□□ -0.46
CACNB3-209ENST00000548860 GFOD1Q9NXC2 390 aa12.19□□□□□ -0.46
CACNB3-209ENST00000548860 FKBP2P26885 142 aaKnown RBP12.19□□□□□ -0.46
CACNB3-209ENST00000548860 ECI1P42126 302 aa12.19□□□□□ -0.46
CACNB3-209ENST00000548860 DLK1P80370 383 aa12.19□□□□□ -0.46
CACNB3-209ENST00000548860 SSX3Q99909 188 aa12.19□□□□□ -0.46
CACNB3-209ENST00000548860 K7ESF4 209 aa12.18□□□□□ -0.46
CACNB3-209ENST00000548860 MPLP40238 635 aa12.18□□□□□ -0.46
CACNB3-209ENST00000548860 SSTP61278 116 aa12.18□□□□□ -0.46
CACNB3-209ENST00000548860 RSPO1Q2MKA7 263 aaPredicted RBP12.18□□□□□ -0.46
CACNB3-209ENST00000548860 FAM53AQ6NSI3 398 aaPredicted RBP12.18□□□□□ -0.46
CACNB3-209ENST00000548860 MRPL14Q6P1L8 145 aaKnown RBP12.18□□□□□ -0.46
CACNB3-209ENST00000548860 KCNE4Q8WWG9 221 aa12.18□□□□□ -0.46
CACNB3-209ENST00000548860 TVP23CQ96ET8 276 aa12.18□□□□□ -0.46
CACNB3-209ENST00000548860 CABLES2Q9BTV7 478 aa12.18□□□□□ -0.46
CACNB3-209ENST00000548860 CACFD1Q9UGQ2 172 aa12.18□□□□□ -0.46
CACNB3-209ENST00000548860 HEXAP06865 529 aa12.18□□□□□ -0.46
CACNB3-209ENST00000548860 GCH1P30793 250 aa12.18□□□□□ -0.46
CACNB3-209ENST00000548860 G6PCP35575 357 aa12.18□□□□□ -0.46
CACNB3-209ENST00000548860 LINC00205P59089 165 aa12.18□□□□□ -0.46
CACNB3-209ENST00000548860 HIST1H2BAQ96A08 127 aa12.18□□□□□ -0.46
CACNB3-209ENST00000548860 SMIM7Q9BQ49 75 aa12.18□□□□□ -0.46
CACNB3-209ENST00000548860 IFT22Q9H7X7 185 aa12.18□□□□□ -0.46
CACNB3-209ENST00000548860 UNKLQ9H9P5 680 aaKnown RBP12.18□□□□□ -0.46
CACNB3-209ENST00000548860 HEYLQ9NQ87 328 aaPredicted RBP12.18□□□□□ -0.46
CACNB3-209ENST00000548860 CLN8Q9UBY8 286 aa12.18□□□□□ -0.46
CACNB3-209ENST00000548860 LAMP3Q9UQV4 416 aa12.18□□□□□ -0.46
CACNB3-209ENST00000548860 PPP1R2P9O14990 202 aa12.18□□□□□ -0.46
CACNB3-209ENST00000548860 CST2P09228 141 aa12.18□□□□□ -0.46
CACNB3-209ENST00000548860 P2RY1P47900 373 aa12.18□□□□□ -0.46
CACNB3-209ENST00000548860 PPP1R32Q7Z5V6 425 aa12.18□□□□□ -0.46
CACNB3-209ENST00000548860 RAB39BQ96DA2 213 aa12.18□□□□□ -0.46
CACNB3-209ENST00000548860 CRIM1Q9NZV1 1036 aa12.18□□□□□ -0.46
CACNB3-209ENST00000548860 PILRBQ9UKJ0 227 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms