RNA–Protein interactions for RNA: ENST00000547247.5

SMARCD1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best)

Gene SMARCD1, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-203ENST00000547247 ERVFRD-1P60508 538 aa18.99■□□□□ 0.63
SMARCD1-203ENST00000547247 DCUN1D5Q9BTE7 237 aa18.99■□□□□ 0.63
SMARCD1-203ENST00000547247 C12orf4Q9NQ89 552 aa18.99■□□□□ 0.63
SMARCD1-203ENST00000547247 CALYQ9NYX4 217 aa18.99■□□□□ 0.63
SMARCD1-203ENST00000547247 TRAV18A0A075B6X5 111 aa18.98■□□□□ 0.63
SMARCD1-203ENST00000547247 CLPXO76031 633 aa18.98■□□□□ 0.63
SMARCD1-203ENST00000547247 EIF4EP06730 217 aaKnown RBP18.98■□□□□ 0.63
SMARCD1-203ENST00000547247 GSTP1P09211 210 aaKnown RBP18.98■□□□□ 0.63
SMARCD1-203ENST00000547247 IGHV1-8P0DP01 117 aa18.98■□□□□ 0.63
SMARCD1-203ENST00000547247 SRP14P37108 136 aaKnown RBP18.98■□□□□ 0.63
SMARCD1-203ENST00000547247 C17orf58Q2M2W7 97 aa18.98■□□□□ 0.63
SMARCD1-203ENST00000547247 C6orf183Q5T699 404 aa18.98■□□□□ 0.63
SMARCD1-203ENST00000547247 FOXB2Q5VYV0 432 aa18.98■□□□□ 0.63
SMARCD1-203ENST00000547247 HEPN1Q6WQI6 88 aa18.98■□□□□ 0.63
SMARCD1-203ENST00000547247 HDHD3Q9BSH5 251 aaPredicted RBP18.98■□□□□ 0.63
SMARCD1-203ENST00000547247 SLIRPQ9GZT3 109 aaKnown RBP18.98■□□□□ 0.63
SMARCD1-203ENST00000547247 MBNL3Q9NUK0 354 aaKnown RBP18.98■□□□□ 0.63
SMARCD1-203ENST00000547247 TRAV40A0A0B4J280 105 aa18.98■□□□□ 0.63
SMARCD1-203ENST00000547247 XRCC3O43542 346 aa18.98■□□□□ 0.63
SMARCD1-203ENST00000547247 RCC1P18754 421 aaPredicted RBP18.98■□□□□ 0.63
SMARCD1-203ENST00000547247 DLX1P56177 255 aa18.98■□□□□ 0.63
SMARCD1-203ENST00000547247 ARFRP1Q13795 201 aa18.98■□□□□ 0.63
SMARCD1-203ENST00000547247 ZNF260Q3ZCT1 412 aa18.98■□□□□ 0.63
SMARCD1-203ENST00000547247 NCR3LG1Q68D85 454 aa18.98■□□□□ 0.63
SMARCD1-203ENST00000547247 TRAT1Q6PIZ9 186 aa18.98■□□□□ 0.63
SMARCD1-203ENST00000547247 ZNF782Q6ZMW2 699 aaPredicted RBP18.98■□□□□ 0.63
SMARCD1-203ENST00000547247 TNFRSF14Q92956 283 aa18.98■□□□□ 0.63
SMARCD1-203ENST00000547247 LHX4Q969G2 390 aa18.98■□□□□ 0.63
SMARCD1-203ENST00000547247 HEXA-AS1Q9H8Q6 139 aa18.98■□□□□ 0.63
SMARCD1-203ENST00000547247 LINC00574Q9H8X3 128 aa18.98■□□□□ 0.63
SMARCD1-203ENST00000547247 FN1P02751 2386 aaKnown RBP18.97■□□□□ 0.63
SMARCD1-203ENST00000547247 NIPBLQ6KC79 2804 aaeCLIP18.97■□□□□ 0.63
SMARCD1-203ENST00000547247 TRBV6-6A0A0A6YYG2 114 aa18.97■□□□□ 0.63
SMARCD1-203ENST00000547247 POM121CA8CG34 1229 aa18.97■□□□□ 0.63
SMARCD1-203ENST00000547247 RGS5O15539 181 aa18.97■□□□□ 0.63
SMARCD1-203ENST00000547247 ORC5O43913 435 aa18.97■□□□□ 0.63
SMARCD1-203ENST00000547247 FSHBP01225 129 aa18.97■□□□□ 0.63
SMARCD1-203ENST00000547247 ELK1P19419 428 aa18.97■□□□□ 0.63
SMARCD1-203ENST00000547247 OMGP23515 440 aa18.97■□□□□ 0.63
SMARCD1-203ENST00000547247 SSTR5P35346 364 aa18.97■□□□□ 0.63
SMARCD1-203ENST00000547247 CHRFAM7AQ494W8 412 aa18.97■□□□□ 0.63
SMARCD1-203ENST00000547247 KLF17Q5JT82 389 aaPredicted RBP18.97■□□□□ 0.63
SMARCD1-203ENST00000547247 GPR157Q5UAW9 335 aa18.97■□□□□ 0.63
SMARCD1-203ENST00000547247 ARL11Q969Q4 196 aa18.97■□□□□ 0.63
SMARCD1-203ENST00000547247 KCNIP1Q9NZI2 227 aa18.97■□□□□ 0.63
SMARCD1-203ENST00000547247 CENPVL3A0A0U1RRI6 287 aa18.96■□□□□ 0.63
SMARCD1-203ENST00000547247 FAM25AB3EWG3 89 aa18.96■□□□□ 0.63
SMARCD1-203ENST00000547247 FAM25CB3EWG5 89 aa18.96■□□□□ 0.63
SMARCD1-203ENST00000547247 FAM25GB3EWG6 89 aa18.96■□□□□ 0.63
SMARCD1-203ENST00000547247 NPIPB11E5RHQ5 1161 aa18.96■□□□□ 0.63
SMARCD1-203ENST00000547247 IGHV4-38-2P0DP08 117 aa18.96■□□□□ 0.63
SMARCD1-203ENST00000547247 HOXB4P17483 251 aaPredicted RBP18.96■□□□□ 0.63
SMARCD1-203ENST00000547247 PRB3Q04118 309 aaPredicted RBP18.96■□□□□ 0.63
SMARCD1-203ENST00000547247 PRAMEF5Q5TYX0 476 aa18.96■□□□□ 0.63
SMARCD1-203ENST00000547247 HACD4Q5VWC8 232 aa18.96■□□□□ 0.63
SMARCD1-203ENST00000547247 ZNF880Q6PDB4 577 aa18.96■□□□□ 0.63
SMARCD1-203ENST00000547247 MOB1BQ7L9L4 216 aa18.96■□□□□ 0.63
SMARCD1-203ENST00000547247 ZNF554Q86TJ5 538 aa18.96■□□□□ 0.63
SMARCD1-203ENST00000547247 RFESDQ8TAC1 157 aa18.96■□□□□ 0.63
SMARCD1-203ENST00000547247 SETD6Q8TBK2 473 aa18.96■□□□□ 0.63
SMARCD1-203ENST00000547247 RAB9BQ9NP90 201 aa18.96■□□□□ 0.63
SMARCD1-203ENST00000547247 ELF5Q9UKW6 265 aaPredicted RBP18.96■□□□□ 0.63
SMARCD1-203ENST00000547247 SESN1Q9Y6P5 492 aa18.96■□□□□ 0.63
SMARCD1-203ENST00000547247 TMEM235A6NFC5 223 aa18.95■□□□□ 0.62
SMARCD1-203ENST00000547247 C12orf77C9JDV5 145 aa18.95■□□□□ 0.62
SMARCD1-203ENST00000547247 RNASEK-C17orf49H0YIS7 233 aa18.95■□□□□ 0.62
SMARCD1-203ENST00000547247 C15orf65H3BRN8 121 aa18.95■□□□□ 0.62
SMARCD1-203ENST00000547247 CTDSP2O14595 271 aa18.95■□□□□ 0.62
SMARCD1-203ENST00000547247 MMP23AO75900 390 aa18.95■□□□□ 0.62
SMARCD1-203ENST00000547247 PNLIPRP3Q17RR3 467 aa18.95■□□□□ 0.62
SMARCD1-203ENST00000547247 TMEM69Q5SWH9 247 aa18.95■□□□□ 0.62
SMARCD1-203ENST00000547247 OR52W1Q6IF63 320 aa18.95■□□□□ 0.62
SMARCD1-203ENST00000547247 MCFD2Q8NI22 146 aa18.95■□□□□ 0.62
SMARCD1-203ENST00000547247 C6orf62Q9GZU0 229 aaPredicted RBP18.95■□□□□ 0.62
SMARCD1-203ENST00000547247 TAF9BQ9HBM6 251 aa18.95■□□□□ 0.62
SMARCD1-203ENST00000547247 IDI2-AS1Q9NZ38 188 aa18.95■□□□□ 0.62
SMARCD1-203ENST00000547247 NUP50Q9UKX7 468 aa18.95■□□□□ 0.62
SMARCD1-203ENST00000547247 IGHV3OR16-10A0A075B7F0 116 aa18.94■□□□□ 0.62
SMARCD1-203ENST00000547247 A6NHS1 94 aa18.94■□□□□ 0.62
SMARCD1-203ENST00000547247 SPINT2O43291 252 aa18.94■□□□□ 0.62
SMARCD1-203ENST00000547247 CRLF1O75462 422 aa18.94■□□□□ 0.62
SMARCD1-203ENST00000547247 TALDO1P37837 337 aa18.94■□□□□ 0.62
SMARCD1-203ENST00000547247 MNDAP41218 407 aa18.94■□□□□ 0.62
SMARCD1-203ENST00000547247 PITPNAQ00169 270 aa18.94■□□□□ 0.62
SMARCD1-203ENST00000547247 GUCA2AQ02747 115 aa18.94■□□□□ 0.62
SMARCD1-203ENST00000547247 KLRD1Q13241 179 aa18.94■□□□□ 0.62
SMARCD1-203ENST00000547247 PDZD9Q8IXQ8 264 aa18.94■□□□□ 0.62
SMARCD1-203ENST00000547247 IZUMO1Q8IYV9 350 aa18.94■□□□□ 0.62
SMARCD1-203ENST00000547247 DTX3Q8N9I9 347 aa18.94■□□□□ 0.62
SMARCD1-203ENST00000547247 OR10A7Q8NGE5 316 aa18.94■□□□□ 0.62
SMARCD1-203ENST00000547247 NXF2Q9GZY0 626 aaKnown RBP18.94■□□□□ 0.62
SMARCD1-203ENST00000547247 AUNIPQ9H7T9 357 aa18.94■□□□□ 0.62
SMARCD1-203ENST00000547247 ADAM30Q9UKF2 790 aa18.94■□□□□ 0.62
SMARCD1-203ENST00000547247 MGAT4AQ9UM21 535 aa18.94■□□□□ 0.62
SMARCD1-203ENST00000547247 SETD2Q9BYW2 2564 aaPredicted RBP18.94■□□□□ 0.62
SMARCD1-203ENST00000547247 GDNFP39905 211 aa18.93■□□□□ 0.62
SMARCD1-203ENST00000547247 GNG2P59768 71 aa18.93■□□□□ 0.62
SMARCD1-203ENST00000547247 Q6ZPA2 131 aa18.93■□□□□ 0.62
SMARCD1-203ENST00000547247 OR13D1Q8NGV5 346 aa18.93■□□□□ 0.62
SMARCD1-203ENST00000547247 UBALD1Q8TB05 177 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms