RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 SGPP2Q8IWX5 399 aa10.07□□□□□ -0.8
CCDC38-202ENST00000546386 CD177Q8N6Q3 437 aa10.07□□□□□ -0.8
CCDC38-202ENST00000546386 OR52M1Q8NGK5 317 aa10.07□□□□□ -0.8
CCDC38-202ENST00000546386 VRK1Q99986 396 aaPredicted RBP10.07□□□□□ -0.8
CCDC38-202ENST00000546386 TAF9BQ9HBM6 251 aa10.07□□□□□ -0.8
CCDC38-202ENST00000546386 A0A0B4J2A0 478 aa10.06□□□□□ -0.8
CCDC38-202ENST00000546386 MED19A0JLT2 244 aaPredicted RBP10.06□□□□□ -0.8
CCDC38-202ENST00000546386 LYNX1G3V0Z9 82 aa10.06□□□□□ -0.8
CCDC38-202ENST00000546386 RLN2P04090 185 aa10.06□□□□□ -0.8
CCDC38-202ENST00000546386 TK1P04183 234 aa10.06□□□□□ -0.8
CCDC38-202ENST00000546386 LYNX1P0DP58 116 aa10.06□□□□□ -0.8
CCDC38-202ENST00000546386 EPHA1P21709 976 aa10.06□□□□□ -0.8
CCDC38-202ENST00000546386 CEACAM6P40199 344 aa10.06□□□□□ -0.8
CCDC38-202ENST00000546386 GLP1RP43220 463 aa10.06□□□□□ -0.8
CCDC38-202ENST00000546386 OR3A1P47881 315 aa10.06□□□□□ -0.8
CCDC38-202ENST00000546386 KLF3P57682 345 aaPredicted RBP10.06□□□□□ -0.8
CCDC38-202ENST00000546386 TAGLNQ01995 201 aaKnown RBP10.06□□□□□ -0.8
CCDC38-202ENST00000546386 ELP2Q6IA86 826 aa10.06□□□□□ -0.8
CCDC38-202ENST00000546386 PEG10Q86TG7 708 aaKnown RBP10.06□□□□□ -0.8
CCDC38-202ENST00000546386 GLYATL2Q8WU03 294 aa10.06□□□□□ -0.8
CCDC38-202ENST00000546386 SFXN3Q9BWM7 321 aa10.06□□□□□ -0.8
CCDC38-202ENST00000546386 BCL2L14Q9BZR8 327 aa10.06□□□□□ -0.8
CCDC38-202ENST00000546386 SLC5A7Q9GZV3 580 aa10.06□□□□□ -0.8
CCDC38-202ENST00000546386 SHPKQ9UHJ6 478 aa10.06□□□□□ -0.8
CCDC38-202ENST00000546386 MEMO1Q9Y316 297 aa10.06□□□□□ -0.8
CCDC38-202ENST00000546386 ATP23Q9Y6H3 246 aa10.06□□□□□ -0.8
CCDC38-202ENST00000546386 ZANQ9Y493 2812 aa10.06□□□□□ -0.8
CCDC38-202ENST00000546386 TUSC2O75896 110 aa10.06□□□□□ -0.8
CCDC38-202ENST00000546386 TBPP20226 339 aa10.06□□□□□ -0.8
CCDC38-202ENST00000546386 LUMP51884 338 aaPredicted RBP10.06□□□□□ -0.8
CCDC38-202ENST00000546386 RBM39Q14498 530 aaKnown RBP10.06□□□□□ -0.8
CCDC38-202ENST00000546386 HNF4GQ14541 408 aa10.06□□□□□ -0.8
CCDC38-202ENST00000546386 TMEM211Q6ICI0 200 aa10.06□□□□□ -0.8
CCDC38-202ENST00000546386 PCSK4Q6UW60 755 aa10.06□□□□□ -0.8
CCDC38-202ENST00000546386 DHRS11Q6UWP2 260 aa10.06□□□□□ -0.8
CCDC38-202ENST00000546386 GSG1LQ6UXU4 331 aa10.06□□□□□ -0.8
CCDC38-202ENST00000546386 TBC1D26Q86UD7 250 aa10.06□□□□□ -0.8
CCDC38-202ENST00000546386 SLA2Q9H6Q3 261 aa10.06□□□□□ -0.8
CCDC38-202ENST00000546386 PCDHB16Q9NRJ7 776 aa10.06□□□□□ -0.8
CCDC38-202ENST00000546386 ZNF107Q9UII5 783 aaPredicted RBP10.06□□□□□ -0.8
CCDC38-202ENST00000546386 CHD6Q8TD26 2715 aa10.05□□□□□ -0.8
CCDC38-202ENST00000546386 RGS13O14921 159 aa10.05□□□□□ -0.8
CCDC38-202ENST00000546386 DTYMKP23919 212 aa10.05□□□□□ -0.8
CCDC38-202ENST00000546386 PPP1CCP36873 323 aaKnown RBP10.05□□□□□ -0.8
CCDC38-202ENST00000546386 ERVK11-1P61568 191 aa10.05□□□□□ -0.8
CCDC38-202ENST00000546386 ACTBL2Q562R1 376 aa10.05□□□□□ -0.8
CCDC38-202ENST00000546386 GGNBP1Q5YKI7 109 aa10.05□□□□□ -0.8
CCDC38-202ENST00000546386 CCDC36Q8IYA8 594 aa10.05□□□□□ -0.8
CCDC38-202ENST00000546386 C1orf162Q8NEQ5 155 aaPredicted RBP10.05□□□□□ -0.8
CCDC38-202ENST00000546386 OR10J5Q8NHC4 309 aa10.05□□□□□ -0.8
CCDC38-202ENST00000546386 RND1Q92730 232 aa10.05□□□□□ -0.8
CCDC38-202ENST00000546386 RNF126Q9BV68 326 aa10.05□□□□□ -0.8
CCDC38-202ENST00000546386 GON7Q9BXV9 100 aa10.05□□□□□ -0.8
CCDC38-202ENST00000546386 RASL12Q9NYN1 266 aa10.05□□□□□ -0.8
CCDC38-202ENST00000546386 ZNRD1Q9P1U0 126 aa10.05□□□□□ -0.8
CCDC38-202ENST00000546386 TRDCB7Z8K6 153 aa10.05□□□□□ -0.8
CCDC38-202ENST00000546386 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.05□□□□□ -0.8
CCDC38-202ENST00000546386 SH2D1BO14796 132 aa10.05□□□□□ -0.8
CCDC38-202ENST00000546386 OR4A8P0C604 315 aa10.05□□□□□ -0.8
CCDC38-202ENST00000546386 MPZP25189 248 aa10.05□□□□□ -0.8
CCDC38-202ENST00000546386 S100A11P31949 105 aa10.05□□□□□ -0.8
CCDC38-202ENST00000546386 DLX1P56177 255 aa10.05□□□□□ -0.8
CCDC38-202ENST00000546386 ZMYND11Q15326 602 aa10.05□□□□□ -0.8
CCDC38-202ENST00000546386 TMEM268Q5VZI3 342 aa10.05□□□□□ -0.8
CCDC38-202ENST00000546386 DPPA2Q7Z7J5 298 aa10.05□□□□□ -0.8
CCDC38-202ENST00000546386 SLC35G3Q8N808 338 aa10.05□□□□□ -0.8
CCDC38-202ENST00000546386 ZNF565Q8N9K5 539 aa10.05□□□□□ -0.8
CCDC38-202ENST00000546386 TMEM185AQ8NFB2 350 aa10.05□□□□□ -0.8
CCDC38-202ENST00000546386 ZNF471Q9BX82 626 aaPredicted RBP10.05□□□□□ -0.8
CCDC38-202ENST00000546386 POLDIP2Q9Y2S7 368 aa10.05□□□□□ -0.8
CCDC38-202ENST00000546386 RFNGQ9Y644 331 aa10.05□□□□□ -0.8
CCDC38-202ENST00000546386 MALRD1Q5VYJ5 2156 aa10.04□□□□□ -0.8
CCDC38-202ENST00000546386 UQCRFS1P47985 274 aa10.04□□□□□ -0.8
CCDC38-202ENST00000546386 ACP7Q6ZNF0 438 aa10.04□□□□□ -0.8
CCDC38-202ENST00000546386 GCSAMQ8N6F7 178 aa10.04□□□□□ -0.8
CCDC38-202ENST00000546386 OR13A1Q8NGR1 328 aa10.04□□□□□ -0.8
CCDC38-202ENST00000546386 CCL17Q92583 94 aa10.04□□□□□ -0.8
CCDC38-202ENST00000546386 BSCL2Q96G97 398 aaPredicted RBP10.04□□□□□ -0.8
CCDC38-202ENST00000546386 COQ2Q96H96 371 aa10.04□□□□□ -0.8
CCDC38-202ENST00000546386 ABHD14BQ96IU4 210 aa10.04□□□□□ -0.8
CCDC38-202ENST00000546386 CXorf58Q96LI9 332 aa10.04□□□□□ -0.8
CCDC38-202ENST00000546386 CXXC4Q9H2H0 198 aa10.04□□□□□ -0.8
CCDC38-202ENST00000546386 OPA3Q9H6K4 179 aa10.04□□□□□ -0.8
CCDC38-202ENST00000546386 ZC4H2Q9NQZ6 224 aa10.04□□□□□ -0.8
CCDC38-202ENST00000546386 RCC2Q9P258 522 aaKnown RBP10.04□□□□□ -0.8
CCDC38-202ENST00000546386 EDARQ9UNE0 448 aa10.04□□□□□ -0.8
CCDC38-202ENST00000546386 DYSFO75923 2080 aa10.04□□□□□ -0.8
CCDC38-202ENST00000546386 ABCA1O95477 2261 aa10.04□□□□□ -0.8
CCDC38-202ENST00000546386 IGKV1D-17A0A075B6S4 117 aa10.04□□□□□ -0.8
CCDC38-202ENST00000546386 RNF222A6NCQ9 220 aa10.04□□□□□ -0.8
CCDC38-202ENST00000546386 CRYM-AS1A6NIL9 109 aa10.04□□□□□ -0.8
CCDC38-202ENST00000546386 DBX1A6NMT0 343 aa10.04□□□□□ -0.8
CCDC38-202ENST00000546386 CDK2AP1O14519 115 aa10.04□□□□□ -0.8
CCDC38-202ENST00000546386 CRHP06850 196 aa10.04□□□□□ -0.8
CCDC38-202ENST00000546386 PSMB6P28072 239 aa10.04□□□□□ -0.8
CCDC38-202ENST00000546386 ID4P47928 161 aa10.04□□□□□ -0.8
CCDC38-202ENST00000546386 MPV17LQ2QL34 196 aa10.04□□□□□ -0.8
CCDC38-202ENST00000546386 LILRB4Q8NHJ6 448 aa10.04□□□□□ -0.8
CCDC38-202ENST00000546386 THAP6Q8TBB0 222 aa10.04□□□□□ -0.8
CCDC38-202ENST00000546386 USP9YO00507 2555 aaPredicted RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms