RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 FXYD6P3P58550 94 aa3.09□□□□□ -1.91
SNHG1-220ENST00000544550 ERVK11-1P61568 191 aa3.09□□□□□ -1.91
SNHG1-220ENST00000544550 TNFRSF9Q07011 255 aa3.09□□□□□ -1.91
SNHG1-220ENST00000544550 ZNF816Q0VGE8 651 aaPredicted RBP3.09□□□□□ -1.91
SNHG1-220ENST00000544550 RAB40BQ12829 278 aa3.09□□□□□ -1.91
SNHG1-220ENST00000544550 IL24Q13007 206 aa3.09□□□□□ -1.91
SNHG1-220ENST00000544550 CYLC2Q14093 348 aaPredicted RBP3.09□□□□□ -1.91
SNHG1-220ENST00000544550 DGCR6Q14129 220 aa3.09□□□□□ -1.91
SNHG1-220ENST00000544550 KIAA0141Q14154 515 aaPredicted RBP3.09□□□□□ -1.91
SNHG1-220ENST00000544550 SMN1Q16637 294 aaKnown RBP3.09□□□□□ -1.91
SNHG1-220ENST00000544550 PIK3CD-AS1Q5SR53 167 aa3.09□□□□□ -1.91
SNHG1-220ENST00000544550 PYHIN1Q6K0P9 492 aa3.09□□□□□ -1.91
SNHG1-220ENST00000544550 CFAP161Q6P656 301 aa3.09□□□□□ -1.91
SNHG1-220ENST00000544550 SHFQ7M4L6 423 aa3.09□□□□□ -1.91
SNHG1-220ENST00000544550 Q8IYB0 196 aa3.09□□□□□ -1.91
SNHG1-220ENST00000544550 TPRX1Q8N7U7 411 aa3.09□□□□□ -1.91
SNHG1-220ENST00000544550 OR8J3Q8NGG0 315 aa3.09□□□□□ -1.91
SNHG1-220ENST00000544550 OR52L1Q8NGH7 329 aa3.09□□□□□ -1.91
SNHG1-220ENST00000544550 OR10X1Q8NGY0 326 aa3.09□□□□□ -1.91
SNHG1-220ENST00000544550 RNF183Q96D59 192 aa3.09□□□□□ -1.91
SNHG1-220ENST00000544550 CEP19Q96LK0 163 aa3.09□□□□□ -1.91
SNHG1-220ENST00000544550 S1PR3Q99500 378 aa3.09□□□□□ -1.91
SNHG1-220ENST00000544550 CCDC28BQ9BUN5 200 aa3.09□□□□□ -1.91
SNHG1-220ENST00000544550 BARHL1Q9BZE3 327 aa3.09□□□□□ -1.91
SNHG1-220ENST00000544550 CHST6Q9GZX3 395 aa3.09□□□□□ -1.91
SNHG1-220ENST00000544550 OR52D1Q9H346 318 aa3.09□□□□□ -1.91
SNHG1-220ENST00000544550 FN3KQ9H479 309 aa3.09□□□□□ -1.91
SNHG1-220ENST00000544550 SLC2A8Q9NY64 477 aa3.09□□□□□ -1.91
SNHG1-220ENST00000544550 ZNF319Q9P2F9 582 aa3.09□□□□□ -1.91
SNHG1-220ENST00000544550 ZNF107Q9UII5 783 aaPredicted RBP3.09□□□□□ -1.91
SNHG1-220ENST00000544550 SLC7A11Q9UPY5 501 aa3.09□□□□□ -1.91
SNHG1-220ENST00000544550 PIGLQ9Y2B2 252 aa3.09□□□□□ -1.91
SNHG1-220ENST00000544550 IGHV4OR15-8A0A075B7B6 117 aa3.08□□□□□ -1.92
SNHG1-220ENST00000544550 A0A087WW49 117 aa3.08□□□□□ -1.92
SNHG1-220ENST00000544550 TRAV41A0A0B4J266 112 aa3.08□□□□□ -1.92
SNHG1-220ENST00000544550 A0A0J9YWU9 116 aa3.08□□□□□ -1.92
SNHG1-220ENST00000544550 A0A0U1RQV5 110 aa3.08□□□□□ -1.92
SNHG1-220ENST00000544550 PQLC2LA1A4F0 135 aa3.08□□□□□ -1.92
SNHG1-220ENST00000544550 FAM90A10PA6NDY2 464 aa3.08□□□□□ -1.92
SNHG1-220ENST00000544550 ACOD1A6NK06 481 aa3.08□□□□□ -1.92
SNHG1-220ENST00000544550 CXCR6O00574 342 aa3.08□□□□□ -1.92
SNHG1-220ENST00000544550 DLGAP1O14490 977 aa3.08□□□□□ -1.92
SNHG1-220ENST00000544550 HSD17B6O14756 317 aa3.08□□□□□ -1.92
SNHG1-220ENST00000544550 RGS16O15492 202 aaPredicted RBP3.08□□□□□ -1.92
SNHG1-220ENST00000544550 CDK2AP2O75956 126 aa3.08□□□□□ -1.92
SNHG1-220ENST00000544550 SCGB1D1O95968 90 aa3.08□□□□□ -1.92
SNHG1-220ENST00000544550 HAND1O96004 215 aa3.08□□□□□ -1.92
SNHG1-220ENST00000544550 GAPDHP04406 335 aaKnown RBP3.08□□□□□ -1.92
SNHG1-220ENST00000544550 H1F0P07305 194 aaKnown RBP3.08□□□□□ -1.92
SNHG1-220ENST00000544550 PSKH1P11801 424 aa3.08□□□□□ -1.92
SNHG1-220ENST00000544550 IL3RAP26951 378 aa3.08□□□□□ -1.92
SNHG1-220ENST00000544550 CD1BP29016 333 aa3.08□□□□□ -1.92
SNHG1-220ENST00000544550 CD40LGP29965 261 aa3.08□□□□□ -1.92
SNHG1-220ENST00000544550 BMI1P35226 326 aa3.08□□□□□ -1.92
SNHG1-220ENST00000544550 IFNGR2P38484 337 aa3.08□□□□□ -1.92
SNHG1-220ENST00000544550 CD81P60033 236 aa3.08□□□□□ -1.92
SNHG1-220ENST00000544550 ZNF91Q05481 1191 aa3.08□□□□□ -1.92
SNHG1-220ENST00000544550 BNIP1Q12981 228 aa3.08□□□□□ -1.92
SNHG1-220ENST00000544550 TATDN3Q17R31 274 aa3.08□□□□□ -1.92
SNHG1-220ENST00000544550 MOGAT2Q3SYC2 334 aa3.08□□□□□ -1.92
SNHG1-220ENST00000544550 IFI44LQ53G44 452 aa3.08□□□□□ -1.92
SNHG1-220ENST00000544550 SPIN3Q5JUX0 258 aa3.08□□□□□ -1.92
SNHG1-220ENST00000544550 CLVS2Q5SYC1 327 aa3.08□□□□□ -1.92
SNHG1-220ENST00000544550 SERTAD4-AS1Q5TG53 156 aa3.08□□□□□ -1.92
SNHG1-220ENST00000544550 RPL13AP3Q6NVV1 102 aa3.08□□□□□ -1.92
SNHG1-220ENST00000544550 EPGNQ6UW88 154 aa3.08□□□□□ -1.92
SNHG1-220ENST00000544550 BAIAP2L2Q6UXY1 529 aa3.08□□□□□ -1.92
SNHG1-220ENST00000544550 SLC16A12Q6ZSM3 486 aa3.08□□□□□ -1.92
SNHG1-220ENST00000544550 ASRGL1Q7L266 308 aa3.08□□□□□ -1.92
SNHG1-220ENST00000544550 MOB3BQ86TA1 216 aa3.08□□□□□ -1.92
SNHG1-220ENST00000544550 HAPLN4Q86UW8 402 aa3.08□□□□□ -1.92
SNHG1-220ENST00000544550 COMMD2Q86X83 199 aa3.08□□□□□ -1.92
SNHG1-220ENST00000544550 ANGPTL5Q86XS5 388 aa3.08□□□□□ -1.92
SNHG1-220ENST00000544550 BATF2Q8N1L9 274 aa3.08□□□□□ -1.92
SNHG1-220ENST00000544550 Q8N6K4 173 aa3.08□□□□□ -1.92
SNHG1-220ENST00000544550 RNF148Q8N7C7 305 aa3.08□□□□□ -1.92
SNHG1-220ENST00000544550 TCTEX1D1Q8N7M0 179 aa3.08□□□□□ -1.92
SNHG1-220ENST00000544550 MAPKAPK5-AS1Q8N8E1 139 aa3.08□□□□□ -1.92
SNHG1-220ENST00000544550 OR51L1Q8NGJ5 315 aa3.08□□□□□ -1.92
SNHG1-220ENST00000544550 OR9G4Q8NGQ1 327 aa3.08□□□□□ -1.92
SNHG1-220ENST00000544550 OR6K6Q8NGW6 343 aa3.08□□□□□ -1.92
SNHG1-220ENST00000544550 PHLDA1Q8WV24 401 aaPredicted RBP3.08□□□□□ -1.92
SNHG1-220ENST00000544550 EMG1Q92979 244 aaKnown RBP3.08□□□□□ -1.92
SNHG1-220ENST00000544550 INTS14Q96SY0 518 aa3.08□□□□□ -1.92
SNHG1-220ENST00000544550 HSPB9Q9BQS6 159 aa3.08□□□□□ -1.92
SNHG1-220ENST00000544550 NEURL2Q9BR09 285 aa3.08□□□□□ -1.92
SNHG1-220ENST00000544550 ABHD6Q9BV23 337 aa3.08□□□□□ -1.92
SNHG1-220ENST00000544550 PARD6BQ9BYG5 372 aa3.08□□□□□ -1.92
SNHG1-220ENST00000544550 ALX4Q9H161 411 aaPredicted RBP3.08□□□□□ -1.92
SNHG1-220ENST00000544550 SRD5A3Q9H8P0 318 aa3.08□□□□□ -1.92
SNHG1-220ENST00000544550 PLEKHA3Q9HB20 300 aa3.08□□□□□ -1.92
SNHG1-220ENST00000544550 RANGRFQ9HD47 186 aaPredicted RBP3.08□□□□□ -1.92
SNHG1-220ENST00000544550 TP53TG1Q9Y2A0 90 aa3.08□□□□□ -1.92
SNHG1-220ENST00000544550 FAM32AQ9Y421 112 aaKnown RBP3.08□□□□□ -1.92
SNHG1-220ENST00000544550 IGHV1-3A0A0C4DH29 117 aa3.07□□□□□ -1.92
SNHG1-220ENST00000544550 KBTBD11-OT1A0A1B0GTJ5 212 aa3.07□□□□□ -1.92
SNHG1-220ENST00000544550 ODAMA1E959 279 aa3.07□□□□□ -1.92
SNHG1-220ENST00000544550 DHRS7CA6NNS2 312 aa3.07□□□□□ -1.92
SNHG1-220ENST00000544550 FAM220BPB1ANY3 271 aa3.07□□□□□ -1.92
SNHG1-220ENST00000544550 OR11H12B2RN74 326 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms