RNA–Protein interactions for RNA: ENST00000543545.5

CPSF7-221, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-221	ENST00000543545	ZNF729	A6NN14	1252 aa	Predicted RBP	8.35	□□□□□ -1.07
CPSF7-221	ENST00000543545		M0R1W7	72 aa		8.35	□□□□□ -1.07
CPSF7-221	ENST00000543545	ORC5	O43913	435 aa		8.35	□□□□□ -1.07
CPSF7-221	ENST00000543545	NAPSA	O96009	420 aa		8.35	□□□□□ -1.07
CPSF7-221	ENST00000543545	HLA-DQB1	P01920	261 aa		8.35	□□□□□ -1.07
CPSF7-221	ENST00000543545	FCER2	P06734	321 aa		8.35	□□□□□ -1.07
CPSF7-221	ENST00000543545	OMG	P23515	440 aa		8.35	□□□□□ -1.07
CPSF7-221	ENST00000543545	NFYB	P25208	207 aa		8.35	□□□□□ -1.07
CPSF7-221	ENST00000543545	SSTR5	P35346	364 aa		8.35	□□□□□ -1.07
CPSF7-221	ENST00000543545	ERVFRD-1	P60508	538 aa		8.35	□□□□□ -1.07
CPSF7-221	ENST00000543545	PRB3	Q04118	309 aa	Predicted RBP	8.35	□□□□□ -1.07
CPSF7-221	ENST00000543545	CR1L	Q2VPA4	569 aa		8.35	□□□□□ -1.07
CPSF7-221	ENST00000543545	RNASE12	Q5GAN4	147 aa	Known RBP	8.35	□□□□□ -1.07
CPSF7-221	ENST00000543545	PRAMEF5	Q5TYX0	476 aa		8.35	□□□□□ -1.07
CPSF7-221	ENST00000543545	TRAT1	Q6PIZ9	186 aa		8.35	□□□□□ -1.07
CPSF7-221	ENST00000543545	FAM131A	Q6UXB0	335 aa		8.35	□□□□□ -1.07
CPSF7-221	ENST00000543545	BAIAP2L2	Q6UXY1	529 aa		8.35	□□□□□ -1.07
CPSF7-221	ENST00000543545	ZNF782	Q6ZMW2	699 aa	Predicted RBP	8.35	□□□□□ -1.07
CPSF7-221	ENST00000543545		Q71RC1	249 aa	Predicted RBP	8.35	□□□□□ -1.07
CPSF7-221	ENST00000543545	MOB1B	Q7L9L4	216 aa		8.35	□□□□□ -1.07
CPSF7-221	ENST00000543545	KIR3DL3	Q8N743	410 aa		8.35	□□□□□ -1.07
CPSF7-221	ENST00000543545	OR6Q1	Q8NGQ2	317 aa		8.35	□□□□□ -1.07
CPSF7-221	ENST00000543545	MAFIP	Q8WZ33	124 aa		8.35	□□□□□ -1.07
CPSF7-221	ENST00000543545	GCDH	Q92947	438 aa	Predicted RBP	8.35	□□□□□ -1.07
CPSF7-221	ENST00000543545	GSX1	Q9H4S2	264 aa	Predicted RBP	8.35	□□□□□ -1.07
CPSF7-221	ENST00000543545	METTL8	Q9H825	291 aa	Known RBP	8.35	□□□□□ -1.07
CPSF7-221	ENST00000543545		Q9N2K0	584 aa		8.35	□□□□□ -1.07
CPSF7-221	ENST00000543545	IFT46	Q9NQC8	304 aa		8.35	□□□□□ -1.07
CPSF7-221	ENST00000543545	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	8.35	□□□□□ -1.07
CPSF7-221	ENST00000543545	MGAT4A	Q9UM21	535 aa		8.35	□□□□□ -1.07
CPSF7-221	ENST00000543545	TRBV6-6	A0A0A6YYG2	114 aa		8.34	□□□□□ -1.07
CPSF7-221	ENST00000543545	MEIS3P1	A6NDR6	274 aa		8.34	□□□□□ -1.07
CPSF7-221	ENST00000543545	C17orf98	A8MV24	154 aa		8.34	□□□□□ -1.07
CPSF7-221	ENST00000543545	TRDC	B7Z8K6	153 aa		8.34	□□□□□ -1.07
CPSF7-221	ENST00000543545	C12orf77	C9JDV5	145 aa		8.34	□□□□□ -1.07
CPSF7-221	ENST00000543545	HBZ	P02008	142 aa		8.34	□□□□□ -1.07
CPSF7-221	ENST00000543545	MELTF	P08582	738 aa		8.34	□□□□□ -1.07
CPSF7-221	ENST00000543545	FCGR3A	P08637	254 aa		8.34	□□□□□ -1.07
CPSF7-221	ENST00000543545	DTYMK	P23919	212 aa		8.34	□□□□□ -1.07
CPSF7-221	ENST00000543545	PRTN3	P24158	256 aa		8.34	□□□□□ -1.07
CPSF7-221	ENST00000543545	COX7A1	P24310	79 aa		8.34	□□□□□ -1.07
CPSF7-221	ENST00000543545	SRP14	P37108	136 aa	Known RBP	8.34	□□□□□ -1.07
CPSF7-221	ENST00000543545	CBX5	P45973	191 aa		8.34	□□□□□ -1.07
CPSF7-221	ENST00000543545	DLX6	P56179	175 aa		8.34	□□□□□ -1.07
CPSF7-221	ENST00000543545	GUCA2A	Q02747	115 aa		8.34	□□□□□ -1.07
CPSF7-221	ENST00000543545	KRTAP1-1	Q07627	177 aa		8.34	□□□□□ -1.07
CPSF7-221	ENST00000543545	C17orf58	Q2M2W7	97 aa		8.34	□□□□□ -1.07
CPSF7-221	ENST00000543545	PYDC2	Q56P42	97 aa		8.34	□□□□□ -1.07
CPSF7-221	ENST00000543545	SPANXN2	Q5MJ10	180 aa		8.34	□□□□□ -1.07
CPSF7-221	ENST00000543545	PYHIN1	Q6K0P9	492 aa		8.34	□□□□□ -1.07
CPSF7-221	ENST00000543545	C1orf122	Q6ZSJ8	110 aa		8.34	□□□□□ -1.07
CPSF7-221	ENST00000543545	TCF23	Q7RTU1	214 aa		8.34	□□□□□ -1.07
CPSF7-221	ENST00000543545	VMO1	Q7Z5L0	202 aa		8.34	□□□□□ -1.07
CPSF7-221	ENST00000543545	PDZD9	Q8IXQ8	264 aa		8.34	□□□□□ -1.07
CPSF7-221	ENST00000543545	GAPT	Q8N292	157 aa		8.34	□□□□□ -1.07
CPSF7-221	ENST00000543545	OR1L1	Q8NH94	360 aa		8.34	□□□□□ -1.07
CPSF7-221	ENST00000543545	IL1F10	Q8WWZ1	152 aa		8.34	□□□□□ -1.07
CPSF7-221	ENST00000543545	LHX4	Q969G2	390 aa		8.34	□□□□□ -1.07
CPSF7-221	ENST00000543545	DACT3	Q96B18	629 aa	Predicted RBP	8.34	□□□□□ -1.07
CPSF7-221	ENST00000543545	GALM	Q96C23	342 aa		8.34	□□□□□ -1.07
CPSF7-221	ENST00000543545	SUCNR1	Q9BXA5	334 aa		8.34	□□□□□ -1.07
CPSF7-221	ENST00000543545	TMPRSS13	Q9BYE2	586 aa		8.34	□□□□□ -1.07
CPSF7-221	ENST00000543545	SIRPD	Q9H106	197 aa		8.34	□□□□□ -1.07
CPSF7-221	ENST00000543545	HEXA-AS1	Q9H8Q6	139 aa		8.34	□□□□□ -1.07
CPSF7-221	ENST00000543545	ZNF286A	Q9HBT8	521 aa		8.34	□□□□□ -1.07
CPSF7-221	ENST00000543545	IDI2-AS1	Q9NZ38	188 aa		8.34	□□□□□ -1.07
CPSF7-221	ENST00000543545	PTTG2	Q9NZH5	202 aa		8.34	□□□□□ -1.07
CPSF7-221	ENST00000543545	GNG12	Q9UBI6	72 aa		8.34	□□□□□ -1.07
CPSF7-221	ENST00000543545	RABL2A	Q9UBK7	228 aa	Predicted RBP	8.34	□□□□□ -1.07
CPSF7-221	ENST00000543545	OPN4	Q9UHM6	478 aa		8.34	□□□□□ -1.07
CPSF7-221	ENST00000543545	RABL2B	Q9UNT1	228 aa		8.34	□□□□□ -1.07
CPSF7-221	ENST00000543545	SESN1	Q9Y6P5	492 aa		8.34	□□□□□ -1.07
CPSF7-221	ENST00000543545	TEX15	Q9BXT5	2789 aa		8.33	□□□□□ -1.08
CPSF7-221	ENST00000543545	IGHV3OR16-10	A0A075B7F0	116 aa		8.33	□□□□□ -1.08
CPSF7-221	ENST00000543545		A0A1W2PRD5	423 aa		8.33	□□□□□ -1.08
CPSF7-221	ENST00000543545		A0A1W2PRF3	423 aa		8.33	□□□□□ -1.08
CPSF7-221	ENST00000543545		A0A1W2PRM7	423 aa		8.33	□□□□□ -1.08
CPSF7-221	ENST00000543545	FAM172BP	A6NC97	362 aa		8.33	□□□□□ -1.08
CPSF7-221	ENST00000543545	POM121C	A8CG34	1229 aa		8.33	□□□□□ -1.08
CPSF7-221	ENST00000543545	SDCBP	O00560	298 aa	Predicted RBP	8.33	□□□□□ -1.08
CPSF7-221	ENST00000543545	FABP7	O15540	132 aa		8.33	□□□□□ -1.08
CPSF7-221	ENST00000543545	SSX5	O60225	188 aa		8.33	□□□□□ -1.08
CPSF7-221	ENST00000543545	MMP23A	O75900	390 aa		8.33	□□□□□ -1.08
CPSF7-221	ENST00000543545	TPPP	O94811	219 aa		8.33	□□□□□ -1.08
CPSF7-221	ENST00000543545	LPL	P06858	475 aa		8.33	□□□□□ -1.08
CPSF7-221	ENST00000543545	SCT	P09683	121 aa		8.33	□□□□□ -1.08
CPSF7-221	ENST00000543545	CGB3	P0DN86	165 aa		8.33	□□□□□ -1.08
CPSF7-221	ENST00000543545	CGB7	P0DN87	165 aa		8.33	□□□□□ -1.08
CPSF7-221	ENST00000543545	IGHV1-8	P0DP01	117 aa		8.33	□□□□□ -1.08
CPSF7-221	ENST00000543545	HNF1A	P20823	631 aa		8.33	□□□□□ -1.08
CPSF7-221	ENST00000543545	FPR2	P25090	351 aa		8.33	□□□□□ -1.08
CPSF7-221	ENST00000543545	KIR2DS4	P43632	304 aa		8.33	□□□□□ -1.08
CPSF7-221	ENST00000543545	DLX1	P56177	255 aa		8.33	□□□□□ -1.08
CPSF7-221	ENST00000543545	HLA-DRB3	P79483	266 aa		8.33	□□□□□ -1.08
CPSF7-221	ENST00000543545	KIR2DS1	Q14954	304 aa		8.33	□□□□□ -1.08
CPSF7-221	ENST00000543545	NCR3LG1	Q68D85	454 aa		8.33	□□□□□ -1.08
CPSF7-221	ENST00000543545	OR52W1	Q6IF63	320 aa		8.33	□□□□□ -1.08
CPSF7-221	ENST00000543545	ZNF880	Q6PDB4	577 aa		8.33	□□□□□ -1.08
CPSF7-221	ENST00000543545	HEPN1	Q6WQI6	88 aa		8.33	□□□□□ -1.08
CPSF7-221	ENST00000543545	C5orf24	Q7Z6I8	188 aa		8.33	□□□□□ -1.08

Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms