RNA–Protein interactions for RNA: ENST00000542772.1

ABCF1-207, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 223 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-207ENST00000542772 SSBP1Q04837 148 aaKnown RBP4.82□□□□□ -1.64
ABCF1-207ENST00000542772 ARFRP1Q13795 201 aa4.82□□□□□ -1.64
ABCF1-207ENST00000542772 ZNF273Q14593 569 aa4.82□□□□□ -1.64
ABCF1-207ENST00000542772 ATXN7L3Q14CW9 347 aaPredicted RBP4.82□□□□□ -1.64
ABCF1-207ENST00000542772 HMGN3Q15651 99 aa4.82□□□□□ -1.64
ABCF1-207ENST00000542772 ZNF79Q15937 498 aa4.82□□□□□ -1.64
ABCF1-207ENST00000542772 NKAPLQ5M9Q1 402 aa4.82□□□□□ -1.64
ABCF1-207ENST00000542772 TMEM69Q5SWH9 247 aa4.82□□□□□ -1.64
ABCF1-207ENST00000542772 TRAT1Q6PIZ9 186 aa4.82□□□□□ -1.64
ABCF1-207ENST00000542772 HEPN1Q6WQI6 88 aa4.82□□□□□ -1.64
ABCF1-207ENST00000542772 HOGA1Q86XE5 327 aa4.82□□□□□ -1.64
ABCF1-207ENST00000542772 LYSMD2Q8IV50 215 aa4.82□□□□□ -1.64
ABCF1-207ENST00000542772 TPRX1Q8N7U7 411 aa4.82□□□□□ -1.64
ABCF1-207ENST00000542772 DTX3Q8N9I9 347 aa4.82□□□□□ -1.64
ABCF1-207ENST00000542772 MAPK1IP1LQ8NDC0 245 aa4.82□□□□□ -1.64
ABCF1-207ENST00000542772 OR52M1Q8NGK5 317 aa4.82□□□□□ -1.64
ABCF1-207ENST00000542772 OR13A1Q8NGR1 328 aa4.82□□□□□ -1.64
ABCF1-207ENST00000542772 OR4K15Q8NH41 348 aa4.82□□□□□ -1.64
ABCF1-207ENST00000542772 TNFRSF14Q92956 283 aa4.82□□□□□ -1.64
ABCF1-207ENST00000542772 TMEM186Q96B77 213 aa4.82□□□□□ -1.64
ABCF1-207ENST00000542772 TMPRSS13Q9BYE2 586 aa4.82□□□□□ -1.64
ABCF1-207ENST00000542772 SIRPDQ9H106 197 aa4.82□□□□□ -1.64
ABCF1-207ENST00000542772 SCPEP1Q9HB40 452 aa4.82□□□□□ -1.64
ABCF1-207ENST00000542772 MTFP1Q9UDX5 166 aa4.82□□□□□ -1.64
ABCF1-207ENST00000542772 TRAPPC2LQ9UL33 140 aa4.82□□□□□ -1.64
ABCF1-207ENST00000542772 MRPS7Q9Y2R9 242 aaKnown RBP4.82□□□□□ -1.64
ABCF1-207ENST00000542772 RBMX2Q9Y388 322 aaKnown RBP4.82□□□□□ -1.64
ABCF1-207ENST00000542772 KPTNQ9Y664 436 aa4.82□□□□□ -1.64
ABCF1-207ENST00000542772 SVEP1Q4LDE5 3571 aa4.82□□□□□ -1.64
ABCF1-207ENST00000542772 CREBBPQ92793 2442 aa4.82□□□□□ -1.64
ABCF1-207ENST00000542772 ABCA2Q9BZC7 2435 aa4.82□□□□□ -1.64
ABCF1-207ENST00000542772 ZANQ9Y493 2812 aa4.82□□□□□ -1.64
ABCF1-207ENST00000542772 CCDC168Q8NDH2 2452 aa4.81□□□□□ -1.64
ABCF1-207ENST00000542772 A0A0G2JMP0 313 aa4.81□□□□□ -1.64
ABCF1-207ENST00000542772 A0A0X1KG70 313 aa4.81□□□□□ -1.64
ABCF1-207ENST00000542772 TMEM235A6NFC5 223 aa4.81□□□□□ -1.64
ABCF1-207ENST00000542772 TRDCB7Z8K6 153 aa4.81□□□□□ -1.64
ABCF1-207ENST00000542772 C12orf77C9JDV5 145 aa4.81□□□□□ -1.64
ABCF1-207ENST00000542772 HSPB6O14558 160 aa4.81□□□□□ -1.64
ABCF1-207ENST00000542772 YPEL1O60688 119 aa4.81□□□□□ -1.64
ABCF1-207ENST00000542772 RBBP9O75884 186 aa4.81□□□□□ -1.64
ABCF1-207ENST00000542772 AVPP01185 164 aa4.81□□□□□ -1.64
ABCF1-207ENST00000542772 SCTP09683 121 aa4.81□□□□□ -1.64
ABCF1-207ENST00000542772 IGHV1-8P0DP01 117 aa4.81□□□□□ -1.64
ABCF1-207ENST00000542772 CCL3L1P16619 93 aa4.81□□□□□ -1.64
ABCF1-207ENST00000542772 CD34P28906 385 aa4.81□□□□□ -1.64
ABCF1-207ENST00000542772 KIR2DS4P43632 304 aa4.81□□□□□ -1.64
ABCF1-207ENST00000542772 LOXL3P58215 753 aa4.81□□□□□ -1.64
ABCF1-207ENST00000542772 ERVFRD-1P60508 538 aa4.81□□□□□ -1.64
ABCF1-207ENST00000542772 ARF6P62330 175 aa4.81□□□□□ -1.64
ABCF1-207ENST00000542772 LSAMPQ13449 338 aa4.81□□□□□ -1.64
ABCF1-207ENST00000542772 IL18Q14116 193 aa4.81□□□□□ -1.64
ABCF1-207ENST00000542772 EDDM3AQ14507 147 aa4.81□□□□□ -1.64
ABCF1-207ENST00000542772 KIR2DS1Q14954 304 aa4.81□□□□□ -1.64
ABCF1-207ENST00000542772 TUSC1Q2TAM9 212 aa4.81□□□□□ -1.64
ABCF1-207ENST00000542772 TMEM30BQ3MIR4 351 aa4.81□□□□□ -1.64
ABCF1-207ENST00000542772 Q3ZCU0 254 aa4.81□□□□□ -1.64
ABCF1-207ENST00000542772 C6orf183Q5T699 404 aa4.81□□□□□ -1.64
ABCF1-207ENST00000542772 STEAP3Q658P3 488 aa4.81□□□□□ -1.64
ABCF1-207ENST00000542772 OR52W1Q6IF63 320 aa4.81□□□□□ -1.64
ABCF1-207ENST00000542772 DHRS11Q6UWP2 260 aa4.81□□□□□ -1.64
ABCF1-207ENST00000542772 BTNL3Q6UXE8 466 aa4.81□□□□□ -1.64
ABCF1-207ENST00000542772 C1orf229Q6ZS94 237 aaPredicted RBP4.81□□□□□ -1.64
ABCF1-207ENST00000542772 MOB1BQ7L9L4 216 aa4.81□□□□□ -1.64
ABCF1-207ENST00000542772 C5orf24Q7Z6I8 188 aa4.81□□□□□ -1.64
ABCF1-207ENST00000542772 GLCCI1Q86VQ1 547 aa4.81□□□□□ -1.64
ABCF1-207ENST00000542772 IZUMO1Q8IYV9 350 aa4.81□□□□□ -1.64
ABCF1-207ENST00000542772 C8orf31Q8N9H6 132 aa4.81□□□□□ -1.64
ABCF1-207ENST00000542772 OR4M2Q8NGB6 313 aa4.81□□□□□ -1.64
ABCF1-207ENST00000542772 OR4A4PQ8NGN8 299 aa4.81□□□□□ -1.64
ABCF1-207ENST00000542772 OR52I2Q8NH67 350 aa4.81□□□□□ -1.64
ABCF1-207ENST00000542772 ZNF596Q8TC21 504 aa4.81□□□□□ -1.64
ABCF1-207ENST00000542772 MRGPRDQ8TDS7 321 aa4.81□□□□□ -1.64
ABCF1-207ENST00000542772 NEK7Q8TDX7 302 aa4.81□□□□□ -1.64
ABCF1-207ENST00000542772 CCDC107Q8WV48 283 aa4.81□□□□□ -1.64
ABCF1-207ENST00000542772 S100ZQ8WXG8 99 aa4.81□□□□□ -1.64
ABCF1-207ENST00000542772 H1FXQ92522 213 aaKnown RBP4.81□□□□□ -1.64
ABCF1-207ENST00000542772 ARL11Q969Q4 196 aa4.81□□□□□ -1.64
ABCF1-207ENST00000542772 UPRTQ96BW1 309 aa4.81□□□□□ -1.64
ABCF1-207ENST00000542772 ZNF714Q96N38 554 aa4.81□□□□□ -1.64
ABCF1-207ENST00000542772 YPEL2Q96QA6 119 aa4.81□□□□□ -1.64
ABCF1-207ENST00000542772 SDHCQ99643 169 aaPredicted RBP4.81□□□□□ -1.64
ABCF1-207ENST00000542772 HDHD3Q9BSH5 251 aaPredicted RBP4.81□□□□□ -1.64
ABCF1-207ENST00000542772 GAL3ST2Q9H3Q3 398 aa4.81□□□□□ -1.64
ABCF1-207ENST00000542772 TAF9BQ9HBM6 251 aa4.81□□□□□ -1.64
ABCF1-207ENST00000542772 RAB9BQ9NP90 201 aa4.81□□□□□ -1.64
ABCF1-207ENST00000542772 AKIP1Q9NQ31 210 aa4.81□□□□□ -1.64
ABCF1-207ENST00000542772 C12orf4Q9NQ89 552 aa4.81□□□□□ -1.64
ABCF1-207ENST00000542772 HIF1ANQ9NWT6 349 aa4.81□□□□□ -1.64
ABCF1-207ENST00000542772 TMEM160Q9NX00 188 aa4.81□□□□□ -1.64
ABCF1-207ENST00000542772 CALYQ9NYX4 217 aa4.81□□□□□ -1.64
ABCF1-207ENST00000542772 KLK11Q9UBX7 282 aa4.81□□□□□ -1.64
ABCF1-207ENST00000542772 ZNF107Q9UII5 783 aaPredicted RBP4.81□□□□□ -1.64
ABCF1-207ENST00000542772 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.8□□□□□ -1.649e-8■■■□□ 17.6
ABCF1-207ENST00000542772 IGKV1D-8A0A087WSZ0 117 aa4.8□□□□□ -1.64
ABCF1-207ENST00000542772 TRBV6-7A0A0A0MS04 114 aa4.8□□□□□ -1.64
ABCF1-207ENST00000542772 TRAV39A0A0B4J263 110 aa4.8□□□□□ -1.64
ABCF1-207ENST00000542772 IGKV1-6A0A0C4DH72 117 aa4.8□□□□□ -1.64
ABCF1-207ENST00000542772 hCG_1809904A0A1W2PP81 198 aa4.8□□□□□ -1.64
ABCF1-207ENST00000542772 A0A1W2PPE2 198 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms