RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 TMEM237Q96Q45 408 aa1.32□□□□□ -2.2
TRAV1-1-201ENST00000542354 RBP7Q96R05 134 aa1.32□□□□□ -2.2
TRAV1-1-201ENST00000542354 OR7D2Q96RA2 312 aa1.32□□□□□ -2.2
TRAV1-1-201ENST00000542354 CPNE1Q99829 537 aa1.32□□□□□ -2.2
TRAV1-1-201ENST00000542354 DERL2Q9GZP9 239 aa1.32□□□□□ -2.2
TRAV1-1-201ENST00000542354 PBOV1Q9GZY1 135 aa1.32□□□□□ -2.2
TRAV1-1-201ENST00000542354 PARP12Q9H0J9 701 aaKnown RBP1.32□□□□□ -2.2
TRAV1-1-201ENST00000542354 NUP62CLQ9H1M0 184 aa1.32□□□□□ -2.2
TRAV1-1-201ENST00000542354 KRT84Q9NSB2 600 aa1.32□□□□□ -2.2
TRAV1-1-201ENST00000542354 CLEC5AQ9NY25 188 aa1.32□□□□□ -2.2
TRAV1-1-201ENST00000542354 MRPL27Q9P0M9 148 aaKnown RBP1.32□□□□□ -2.2
TRAV1-1-201ENST00000542354 STX18Q9P2W9 335 aaKnown RBP1.32□□□□□ -2.2
TRAV1-1-201ENST00000542354 BAIAP2L1Q9UHR4 511 aa1.32□□□□□ -2.2
TRAV1-1-201ENST00000542354 ATPIF1Q9UII2 106 aa1.32□□□□□ -2.2
TRAV1-1-201ENST00000542354 ZNF180Q9UJW8 692 aa1.32□□□□□ -2.2
TRAV1-1-201ENST00000542354 DHDHQ9UQ10 334 aa1.32□□□□□ -2.2
TRAV1-1-201ENST00000542354 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.32□□□□□ -2.2
TRAV1-1-201ENST00000542354 RFNGQ9Y644 331 aa1.32□□□□□ -2.2
TRAV1-1-201ENST00000542354 V9GYQ6 96 aa1.32□□□□□ -2.2
TRAV1-1-201ENST00000542354 EXOC1LA0A1B0GW35 172 aa1.31□□□□□ -2.2
TRAV1-1-201ENST00000542354 TMEM213A2RRL7 107 aa1.31□□□□□ -2.2
TRAV1-1-201ENST00000542354 OR2T8A6NH00 312 aa1.31□□□□□ -2.2
TRAV1-1-201ENST00000542354 TMEM210A6NLX4 147 aa1.31□□□□□ -2.2
TRAV1-1-201ENST00000542354 ANXA2P2A6NMY6 339 aa1.31□□□□□ -2.2
TRAV1-1-201ENST00000542354 HNRNPCL2B2RXH8 293 aa1.31□□□□□ -2.2
TRAV1-1-201ENST00000542354 HSD17B6O14756 317 aa1.31□□□□□ -2.2
TRAV1-1-201ENST00000542354 TRMUO75648 421 aaKnown RBP1.31□□□□□ -2.2
TRAV1-1-201ENST00000542354 OR2C1O95371 312 aa1.31□□□□□ -2.2
TRAV1-1-201ENST00000542354 IPO7O95373 1038 aaKnown RBP1.31□□□□□ -2.2
TRAV1-1-201ENST00000542354 AGR2O95994 175 aa1.31□□□□□ -2.2
TRAV1-1-201ENST00000542354 IFNB1P01574 187 aa1.31□□□□□ -2.2
TRAV1-1-201ENST00000542354 CSTBP04080 98 aaKnown RBP1.31□□□□□ -2.2
TRAV1-1-201ENST00000542354 PTMAP06454 111 aaKnown RBP1.31□□□□□ -2.2
TRAV1-1-201ENST00000542354 ACSM4P0C7M7 580 aa1.31□□□□□ -2.2
TRAV1-1-201ENST00000542354 GKN3PP0CG01 181 aa1.31□□□□□ -2.2
TRAV1-1-201ENST00000542354 C8orf88P0DMB2 117 aa1.31□□□□□ -2.2
TRAV1-1-201ENST00000542354 MYOD1P15172 320 aa1.31□□□□□ -2.2
TRAV1-1-201ENST00000542354 IL7RP16871 459 aa1.31□□□□□ -2.2
TRAV1-1-201ENST00000542354 EVI2AP22794 236 aa1.31□□□□□ -2.2
TRAV1-1-201ENST00000542354 SSTR1P30872 391 aa1.31□□□□□ -2.2
TRAV1-1-201ENST00000542354 MAS1LP35410 378 aa1.31□□□□□ -2.2
TRAV1-1-201ENST00000542354 RPL13AP40429 203 aaKnown RBP1.31□□□□□ -2.2
TRAV1-1-201ENST00000542354 PCP4P48539 62 aa1.31□□□□□ -2.2
TRAV1-1-201ENST00000542354 CX3CL1P78423 397 aa1.31□□□□□ -2.2
TRAV1-1-201ENST00000542354 CDK16Q00536 496 aa1.31□□□□□ -2.2
TRAV1-1-201ENST00000542354 CD47Q08722 323 aa1.31□□□□□ -2.2
TRAV1-1-201ENST00000542354 ZNF816Q0VGE8 651 aaPredicted RBP1.31□□□□□ -2.2
TRAV1-1-201ENST00000542354 EDDM3AQ14507 147 aa1.31□□□□□ -2.2
TRAV1-1-201ENST00000542354 RGNQ15493 299 aa1.31□□□□□ -2.2
TRAV1-1-201ENST00000542354 OR4D1Q15615 310 aa1.31□□□□□ -2.2
TRAV1-1-201ENST00000542354 C5orf64Q2M2E5 130 aa1.31□□□□□ -2.2
TRAV1-1-201ENST00000542354 KRTAP19-2Q3LHN2 52 aa1.31□□□□□ -2.2
TRAV1-1-201ENST00000542354 GTDC1Q4AE62 458 aa1.31□□□□□ -2.2
TRAV1-1-201ENST00000542354 PAN3Q58A45 887 aaKnown RBP1.31□□□□□ -2.2
TRAV1-1-201ENST00000542354 LCE1FQ5T754 118 aa1.31□□□□□ -2.2
TRAV1-1-201ENST00000542354 LCE3AQ5TA76 89 aa1.31□□□□□ -2.2
TRAV1-1-201ENST00000542354 UBE2UQ5VVX9 321 aa1.31□□□□□ -2.2
TRAV1-1-201ENST00000542354 TMEM268Q5VZI3 342 aa1.31□□□□□ -2.2
TRAV1-1-201ENST00000542354 METTL21CQ5VZV1 264 aa1.31□□□□□ -2.2
TRAV1-1-201ENST00000542354 FAM71E1Q6IPT2 247 aa1.31□□□□□ -2.2
TRAV1-1-201ENST00000542354 AADACL2Q6P093 401 aa1.31□□□□□ -2.2
TRAV1-1-201ENST00000542354 OLIG3Q7RTU3 272 aa1.31□□□□□ -2.2
TRAV1-1-201ENST00000542354 H2BFWTQ7Z2G1 175 aa1.31□□□□□ -2.2
TRAV1-1-201ENST00000542354 LRRTM1Q86UE6 522 aa1.31□□□□□ -2.2
TRAV1-1-201ENST00000542354 KIRREL3Q8IZU9 778 aa1.31□□□□□ -2.2
TRAV1-1-201ENST00000542354 ASCC1Q8N9N2 400 aaKnown RBP1.31□□□□□ -2.2
TRAV1-1-201ENST00000542354 DNAAF1Q8NEP3 725 aa1.31□□□□□ -2.2
TRAV1-1-201ENST00000542354 OR5T1Q8NG75 326 aa1.31□□□□□ -2.2
TRAV1-1-201ENST00000542354 OR5D16Q8NGK9 328 aa1.31□□□□□ -2.2
TRAV1-1-201ENST00000542354 OR10X1Q8NGY0 326 aa1.31□□□□□ -2.2
TRAV1-1-201ENST00000542354 OR5J2Q8NH18 312 aa1.31□□□□□ -2.2
TRAV1-1-201ENST00000542354 FNDC8Q8TC99 324 aa1.31□□□□□ -2.2
TRAV1-1-201ENST00000542354 TRIM63Q969Q1 353 aa1.31□□□□□ -2.2
TRAV1-1-201ENST00000542354 GNPNAT1Q96EK6 184 aaPredicted RBP1.31□□□□□ -2.2
TRAV1-1-201ENST00000542354 OR8B4Q96RC9 309 aa1.31□□□□□ -2.2
TRAV1-1-201ENST00000542354 RTL8AQ9BWD3 113 aa1.31□□□□□ -2.2
TRAV1-1-201ENST00000542354 ANKRD60Q9BZ19 345 aa1.31□□□□□ -2.2
TRAV1-1-201ENST00000542354 C12orf10Q9HB07 376 aa1.31□□□□□ -2.2
TRAV1-1-201ENST00000542354 FARSBQ9NSD9 589 aaKnown RBP1.31□□□□□ -2.2
TRAV1-1-201ENST00000542354 TAS2R3Q9NYW6 316 aa1.31□□□□□ -2.2
TRAV1-1-201ENST00000542354 NUDT4Q9NZJ9 180 aa1.31□□□□□ -2.2
TRAV1-1-201ENST00000542354 RPS6KB2Q9UBS0 482 aa1.31□□□□□ -2.2
TRAV1-1-201ENST00000542354 KLK11Q9UBX7 282 aa1.31□□□□□ -2.2
TRAV1-1-201ENST00000542354 SLC22A13Q9Y226 551 aa1.31□□□□□ -2.2
TRAV1-1-201ENST00000542354 SNX13Q9Y5W8 968 aa1.31□□□□□ -2.2
TRAV1-1-201ENST00000542354 LY96Q9Y6Y9 160 aa1.31□□□□□ -2.2
TRAV1-1-201ENST00000542354 KIF25-AS1Q9Y6Z4 181 aa1.31□□□□□ -2.2
TRAV1-1-201ENST00000542354 TRGV10A0A0A0MS01 117 aa1.3□□□□□ -2.2
TRAV1-1-201ENST00000542354 A8MWP6 167 aa1.3□□□□□ -2.2
TRAV1-1-201ENST00000542354 ZNF736B4DX44 427 aaPredicted RBP1.3□□□□□ -2.2
TRAV1-1-201ENST00000542354 SUPT3HB4E1H0 165 aa1.3□□□□□ -2.2
TRAV1-1-201ENST00000542354 F5H5K5 113 aa1.3□□□□□ -2.2
TRAV1-1-201ENST00000542354 PITX3O75364 302 aa1.3□□□□□ -2.2
TRAV1-1-201ENST00000542354 SUPT3HO75486 399 aa1.3□□□□□ -2.2
TRAV1-1-201ENST00000542354 NXPH4O95158 308 aa1.3□□□□□ -2.2
TRAV1-1-201ENST00000542354 MT-ATP6P00846 226 aa1.3□□□□□ -2.2
TRAV1-1-201ENST00000542354 IGKV1D-12P01611 117 aa1.3□□□□□ -2.2
TRAV1-1-201ENST00000542354 BGLAPP02818 100 aa1.3□□□□□ -2.2
TRAV1-1-201ENST00000542354 HIST1H2ABP04908 130 aa1.3□□□□□ -2.2
TRAV1-1-201ENST00000542354 ATP5G1P05496 136 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 176.8 ms