RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 C6orf183Q5T699 404 aa14.49□□□□□ -0.09
TMEM50B-210ENST00000542230 ALKAL2Q6UX46 152 aa14.49□□□□□ -0.09
TMEM50B-210ENST00000542230 MEX3BQ6ZN04 569 aaKnown RBP14.49□□□□□ -0.09
TMEM50B-210ENST00000542230 ITLN1Q8WWA0 313 aa14.49□□□□□ -0.09
TMEM50B-210ENST00000542230 MSI2Q96DH6 328 aaKnown RBP14.49□□□□□ -0.09
TMEM50B-210ENST00000542230 COQ2Q96H96 371 aa14.49□□□□□ -0.09
TMEM50B-210ENST00000542230 WFIKKN1Q96NZ8 548 aa14.49□□□□□ -0.09
TMEM50B-210ENST00000542230 DMRTA2Q96SC8 542 aa14.49□□□□□ -0.09
TMEM50B-210ENST00000542230 VRK1Q99986 396 aaPredicted RBP14.49□□□□□ -0.09
TMEM50B-210ENST00000542230 DCTN5Q9BTE1 182 aa14.49□□□□□ -0.09
TMEM50B-210ENST00000542230 SLC5A7Q9GZV3 580 aa14.49□□□□□ -0.09
TMEM50B-210ENST00000542230 KIF25Q9UIL4 384 aa14.49□□□□□ -0.09
TMEM50B-210ENST00000542230 ERRFI1Q9UJM3 462 aaPredicted RBP14.49□□□□□ -0.09
TMEM50B-210ENST00000542230 SPEF1Q9Y4P9 236 aa14.49□□□□□ -0.09
TMEM50B-210ENST00000542230 TRBV6-7A0A0A0MS04 114 aa14.49□□□□□ -0.09
TMEM50B-210ENST00000542230 GLAP06280 429 aa14.49□□□□□ -0.09
TMEM50B-210ENST00000542230 ACAA1P09110 424 aaPredicted RBP14.49□□□□□ -0.09
TMEM50B-210ENST00000542230 IAH1Q2TAA2 248 aaPredicted RBP14.49□□□□□ -0.09
TMEM50B-210ENST00000542230 TMEM65Q6PI78 240 aa14.49□□□□□ -0.09
TMEM50B-210ENST00000542230 TBC1D26Q86UD7 250 aa14.49□□□□□ -0.09
TMEM50B-210ENST00000542230 GCSAMQ8N6F7 178 aa14.49□□□□□ -0.09
TMEM50B-210ENST00000542230 RND1Q92730 232 aa14.49□□□□□ -0.09
TMEM50B-210ENST00000542230 TAF9BQ9HBM6 251 aa14.49□□□□□ -0.09
TMEM50B-210ENST00000542230 COL12A1Q99715 3063 aa14.49□□□□□ -0.09
TMEM50B-210ENST00000542230 MSGN1A6NI15 193 aa14.48□□□□□ -0.09
TMEM50B-210ENST00000542230 MPPED1O15442 326 aa14.48□□□□□ -0.09
TMEM50B-210ENST00000542230 SPDEFO95238 335 aa14.48□□□□□ -0.09
TMEM50B-210ENST00000542230 DIRAS3O95661 229 aa14.48□□□□□ -0.09
TMEM50B-210ENST00000542230 SPERTQ8NA61 448 aa14.48□□□□□ -0.09
TMEM50B-210ENST00000542230 OR10J5Q8NHC4 309 aa14.48□□□□□ -0.09
TMEM50B-210ENST00000542230 THAP6Q8TBB0 222 aa14.48□□□□□ -0.09
TMEM50B-210ENST00000542230 GALNT14Q96FL9 552 aa14.48□□□□□ -0.09
TMEM50B-210ENST00000542230 MEGF10Q96KG7 1140 aa14.48□□□□□ -0.09
TMEM50B-210ENST00000542230 C2orf50Q96LR7 162 aa14.48□□□□□ -0.09
TMEM50B-210ENST00000542230 SHARPINQ9H0F6 387 aa14.48□□□□□ -0.09
TMEM50B-210ENST00000542230 ESRP2Q9H6T0 727 aaKnown RBP14.48□□□□□ -0.09
TMEM50B-210ENST00000542230 DCAF16Q9NXF7 216 aa14.48□□□□□ -0.09
TMEM50B-210ENST00000542230 DSCAMO60469 2012 aa14.48□□□□□ -0.09
TMEM50B-210ENST00000542230 CFAP46Q8IYW2 2715 aa14.48□□□□□ -0.09
TMEM50B-210ENST00000542230 OR3A1P47881 315 aa14.48□□□□□ -0.09
TMEM50B-210ENST00000542230 GLIPR1P48060 266 aa14.48□□□□□ -0.09
TMEM50B-210ENST00000542230 CDSNQ15517 529 aa14.48□□□□□ -0.09
TMEM50B-210ENST00000542230 C3orf36Q3SXR2 165 aa14.48□□□□□ -0.09
TMEM50B-210ENST00000542230 ADAM5Q6NVV9 412 aa14.48□□□□□ -0.09
TMEM50B-210ENST00000542230 OR4A4PQ8NGN8 299 aa14.48□□□□□ -0.09
TMEM50B-210ENST00000542230 OR1L1Q8NH94 360 aa14.48□□□□□ -0.09
TMEM50B-210ENST00000542230 DCUN1D4Q92564 292 aa14.48□□□□□ -0.09
TMEM50B-210ENST00000542230 ELOVL5Q9NYP7 299 aa14.48□□□□□ -0.09
TMEM50B-210ENST00000542230 KCNIP3Q9Y2W7 256 aa14.48□□□□□ -0.09
TMEM50B-210ENST00000542230 IGKV1D-17A0A075B6S4 117 aa14.47□□□□□ -0.09
TMEM50B-210ENST00000542230 RPS10-NUDT3A0A1W2PQS6 291 aa14.47□□□□□ -0.09
TMEM50B-210ENST00000542230 POM121CA8CG34 1229 aa14.47□□□□□ -0.09
TMEM50B-210ENST00000542230 PSG2P11465 335 aa14.47□□□□□ -0.09
TMEM50B-210ENST00000542230 LMO1P25800 156 aa14.47□□□□□ -0.09
TMEM50B-210ENST00000542230 GRNP28799 593 aaKnown RBP14.47□□□□□ -0.09
TMEM50B-210ENST00000542230 CD200P41217 278 aa14.47□□□□□ -0.09
TMEM50B-210ENST00000542230 S100A10P60903 97 aa14.47□□□□□ -0.09
TMEM50B-210ENST00000542230 LY6DQ14210 128 aa14.47□□□□□ -0.09
TMEM50B-210ENST00000542230 TESK1Q15569 626 aa14.47□□□□□ -0.09
TMEM50B-210ENST00000542230 C1orf174Q8IYL3 243 aa14.47□□□□□ -0.09
TMEM50B-210ENST00000542230 H1FOOQ8IZA3 346 aaPredicted RBP14.47□□□□□ -0.09
TMEM50B-210ENST00000542230 MEMO1Q9Y316 297 aa14.47□□□□□ -0.09
TMEM50B-210ENST00000542230 USF3Q68DE3 2245 aa14.47□□□□□ -0.09
TMEM50B-210ENST00000542230 C3orf85A0A1B0GTC6 90 aa14.47□□□□□ -0.09
TMEM50B-210ENST00000542230 RP2O75695 350 aa14.47□□□□□ -0.09
TMEM50B-210ENST00000542230 LIAT1Q6ZQX7 453 aa14.47□□□□□ -0.09
TMEM50B-210ENST00000542230 ZNF565Q8N9K5 539 aa14.47□□□□□ -0.09
TMEM50B-210ENST00000542230 MBNL3Q9NUK0 354 aaKnown RBP14.47□□□□□ -0.09
TMEM50B-210ENST00000542230 PCDHB10Q9UN67 800 aa14.47□□□□□ -0.09
TMEM50B-210ENST00000542230 ACACBO00763 2458 aa14.47□□□□□ -0.09
TMEM50B-210ENST00000542230 HIVEP3Q5T1R4 2406 aa14.47□□□□□ -0.09
TMEM50B-210ENST00000542230 HRNRQ86YZ3 2850 aaPredicted RBP14.46□□□□□ -0.09
TMEM50B-210ENST00000542230 IGLV2-14P01704 120 aa14.46□□□□□ -0.09
TMEM50B-210ENST00000542230 RLN2P04090 185 aa14.46□□□□□ -0.09
TMEM50B-210ENST00000542230 MDH2P40926 338 aaKnown RBP14.46□□□□□ -0.09
TMEM50B-210ENST00000542230 RBPJQ06330 500 aa14.46□□□□□ -0.09
TMEM50B-210ENST00000542230 TMEM108Q6UXF1 575 aa14.46□□□□□ -0.09
TMEM50B-210ENST00000542230 KCNRGQ8N5I3 272 aa14.46□□□□□ -0.09
TMEM50B-210ENST00000542230 OR1S1Q8NH92 325 aa14.46□□□□□ -0.09
TMEM50B-210ENST00000542230 NEUROG1Q92886 237 aa14.46□□□□□ -0.09
TMEM50B-210ENST00000542230 C18orf12Q96KH6 178 aa14.46□□□□□ -0.09
TMEM50B-210ENST00000542230 CITED4Q96RK1 184 aa14.46□□□□□ -0.09
TMEM50B-210ENST00000542230 VKORC1Q9BQB6 163 aa14.46□□□□□ -0.09
TMEM50B-210ENST00000542230 CABLES2Q9BTV7 478 aa14.46□□□□□ -0.09
TMEM50B-210ENST00000542230 UBQLN2Q9UHD9 624 aa14.46□□□□□ -0.09
TMEM50B-210ENST00000542230 OR2W1Q9Y3N9 320 aa14.46□□□□□ -0.09
TMEM50B-210ENST00000542230 A0A1B0GW55 424 aa14.46□□□□□ -0.1
TMEM50B-210ENST00000542230 SRRM5B3KS81 715 aa14.46□□□□□ -0.1
TMEM50B-210ENST00000542230 C12orf77C9JDV5 145 aa14.46□□□□□ -0.1
TMEM50B-210ENST00000542230 IGHV1-46P01743 117 aa14.46□□□□□ -0.1
TMEM50B-210ENST00000542230 DUX4L2P0CJ85 424 aa14.46□□□□□ -0.1
TMEM50B-210ENST00000542230 DUX4L3P0CJ86 424 aa14.46□□□□□ -0.1
TMEM50B-210ENST00000542230 DUX4L4P0CJ87 422 aa14.46□□□□□ -0.1
TMEM50B-210ENST00000542230 DUX4L5P0CJ88 424 aa14.46□□□□□ -0.1
TMEM50B-210ENST00000542230 DUX4L6P0CJ89 424 aa14.46□□□□□ -0.1
TMEM50B-210ENST00000542230 DUX4L7P0CJ90 424 aa14.46□□□□□ -0.1
TMEM50B-210ENST00000542230 SELLP14151 372 aa14.46□□□□□ -0.1
TMEM50B-210ENST00000542230 PRDX2P32119 198 aa14.46□□□□□ -0.1
TMEM50B-210ENST00000542230 SMIM21Q3B7S5 101 aa14.46□□□□□ -0.1
TMEM50B-210ENST00000542230 DUX4L9Q6RFH8 374 aaPredicted RBP14.46□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms