RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 TMEM30CPA0ZSE6 113 aa13.66□□□□□ -0.22
UBC-208ENST00000540700 METTL21EPA6NDL7 271 aa13.66□□□□□ -0.22
UBC-208ENST00000540700 NAPSAO96009 420 aa13.66□□□□□ -0.22
UBC-208ENST00000540700 MADCAM1Q13477 382 aa13.66□□□□□ -0.22
UBC-208ENST00000540700 RBM39Q14498 530 aaKnown RBP13.66□□□□□ -0.22
UBC-208ENST00000540700 ZNF260Q3ZCT1 412 aa13.66□□□□□ -0.22
UBC-208ENST00000540700 KLF17Q5JT82 389 aaPredicted RBP13.66□□□□□ -0.22
UBC-208ENST00000540700 HCP5Q6MZN7 132 aa13.66□□□□□ -0.22
UBC-208ENST00000540700 FAM53AQ6NSI3 398 aaPredicted RBP13.66□□□□□ -0.22
UBC-208ENST00000540700 KIR3DL3Q8N743 410 aa13.66□□□□□ -0.22
UBC-208ENST00000540700 UBALD1Q8TB05 177 aa13.66□□□□□ -0.22
UBC-208ENST00000540700 TNFRSF14Q92956 283 aa13.66□□□□□ -0.22
UBC-208ENST00000540700 WDFY2Q96P53 400 aa13.66□□□□□ -0.22
UBC-208ENST00000540700 NCOR1P1Q9H4R4 102 aa13.66□□□□□ -0.22
UBC-208ENST00000540700 SIRT7Q9NRC8 400 aa13.66□□□□□ -0.22
UBC-208ENST00000540700 NDUFA13Q9P0J0 144 aa13.66□□□□□ -0.22
UBC-208ENST00000540700 DOCK11Q5JSL3 2073 aa13.65□□□□□ -0.22
UBC-208ENST00000540700 DSCAML1Q8TD84 2053 aa13.65□□□□□ -0.22
UBC-208ENST00000540700 hADV38S2A0JD32 116 aa13.65□□□□□ -0.22
UBC-208ENST00000540700 C17orf98A8MV24 154 aa13.65□□□□□ -0.22
UBC-208ENST00000540700 C15orf65H3BRN8 121 aa13.65□□□□□ -0.22
UBC-208ENST00000540700 ZNF728P0DKX0 622 aa13.65□□□□□ -0.22
UBC-208ENST00000540700 RCC1P18754 421 aaPredicted RBP13.65□□□□□ -0.22
UBC-208ENST00000540700 GATA3P23771 443 aa13.65□□□□□ -0.22
UBC-208ENST00000540700 SSTR5P35346 364 aa13.65□□□□□ -0.22
UBC-208ENST00000540700 SOX6P35712 828 aa13.65□□□□□ -0.22
UBC-208ENST00000540700 GLP1RP43220 463 aa13.65□□□□□ -0.22
UBC-208ENST00000540700 KLRD1Q13241 179 aa13.65□□□□□ -0.22
UBC-208ENST00000540700 CDNFQ49AH0 187 aa13.65□□□□□ -0.22
UBC-208ENST00000540700 ZNF880Q6PDB4 577 aa13.65□□□□□ -0.22
UBC-208ENST00000540700 VMO1Q7Z5L0 202 aa13.65□□□□□ -0.22
UBC-208ENST00000540700 LAX1Q8IWV1 398 aa13.65□□□□□ -0.22
UBC-208ENST00000540700 ZFAND2BQ8WV99 257 aa13.65□□□□□ -0.22
UBC-208ENST00000540700 AP3S1Q92572 193 aa13.65□□□□□ -0.22
UBC-208ENST00000540700 KPTNQ9Y664 436 aa13.65□□□□□ -0.22
UBC-208ENST00000540700 AUP1Q9Y679 476 aa13.65□□□□□ -0.22
UBC-208ENST00000540700 TRAV18A0A075B6X5 111 aa13.64□□□□□ -0.23
UBC-208ENST00000540700 TRGV10A0A0A0MS01 117 aa13.64□□□□□ -0.23
UBC-208ENST00000540700 A0A0A6YYJ9 748 aa13.64□□□□□ -0.23
UBC-208ENST00000540700 TMEM235A6NFC5 223 aa13.64□□□□□ -0.23
UBC-208ENST00000540700 J3QLI3 93 aa13.64□□□□□ -0.23
UBC-208ENST00000540700 SSX5O60225 188 aa13.64□□□□□ -0.23
UBC-208ENST00000540700 FSHBP01225 129 aa13.64□□□□□ -0.23
UBC-208ENST00000540700 OMGP23515 440 aa13.64□□□□□ -0.23
UBC-208ENST00000540700 PRAMEF5Q5TYX0 476 aa13.64□□□□□ -0.23
UBC-208ENST00000540700 TRAPPC6BQ86SZ2 158 aa13.64□□□□□ -0.23
UBC-208ENST00000540700 UPRTQ96BW1 309 aa13.64□□□□□ -0.23
UBC-208ENST00000540700 DMRTB1Q96MA1 342 aa13.64□□□□□ -0.23
UBC-208ENST00000540700 ZNF714Q96N38 554 aa13.64□□□□□ -0.23
UBC-208ENST00000540700 PCGF1Q9BSM1 259 aa13.64□□□□□ -0.23
UBC-208ENST00000540700 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.64□□□□□ -0.238e-7■□□□□ 8.6
UBC-208ENST00000540700 MBNL3Q9NUK0 354 aaKnown RBP13.64□□□□□ -0.23
UBC-208ENST00000540700 CALYQ9NYX4 217 aa13.64□□□□□ -0.23
UBC-208ENST00000540700 UBE2J1Q9Y385 318 aaPredicted RBP13.64□□□□□ -0.23
UBC-208ENST00000540700 IGHV3OR16-10A0A075B7F0 116 aa13.63□□□□□ -0.23
UBC-208ENST00000540700 FUOMA2VDF0 154 aa13.63□□□□□ -0.23
UBC-208ENST00000540700 C12orf77C9JDV5 145 aa13.63□□□□□ -0.23
UBC-208ENST00000540700 RNASEK-C17orf49H0YIS7 233 aa13.63□□□□□ -0.23
UBC-208ENST00000540700 M0R1W7 72 aa13.63□□□□□ -0.23
UBC-208ENST00000540700 TOX4O94842 621 aa13.63□□□□□ -0.23
UBC-208ENST00000540700 APOA1P02647 267 aa13.63□□□□□ -0.23
UBC-208ENST00000540700 IGHV4-38-2P0DP08 117 aa13.63□□□□□ -0.23
UBC-208ENST00000540700 COMPP49747 757 aaPredicted RBP13.63□□□□□ -0.23
UBC-208ENST00000540700 TAS2R20P59543 309 aa13.63□□□□□ -0.23
UBC-208ENST00000540700 METTL11BQ5VVY1 283 aa13.63□□□□□ -0.23
UBC-208ENST00000540700 MZT2AQ6P582 158 aa13.63□□□□□ -0.23
UBC-208ENST00000540700 ZNF782Q6ZMW2 699 aaPredicted RBP13.63□□□□□ -0.23
UBC-208ENST00000540700 NUDCD2Q8WVJ2 157 aa13.63□□□□□ -0.23
UBC-208ENST00000540700 CMTM3Q96MX0 182 aa13.63□□□□□ -0.23
UBC-208ENST00000540700 AUNIPQ9H7T9 357 aa13.63□□□□□ -0.23
UBC-208ENST00000540700 LINC00574Q9H8X3 128 aa13.63□□□□□ -0.23
UBC-208ENST00000540700 TAS2R3Q9NYW6 316 aa13.63□□□□□ -0.23
UBC-208ENST00000540700 OR6C3Q9NZP0 311 aa13.63□□□□□ -0.23
UBC-208ENST00000540700 SOX21Q9Y651 276 aaPredicted RBP13.63□□□□□ -0.23
UBC-208ENST00000540700 TRBV6-6A0A0A6YYG2 114 aa13.62□□□□□ -0.23
UBC-208ENST00000540700 A0A0A6YYH2 397 aa13.62□□□□□ -0.23
UBC-208ENST00000540700 KBTBD11-OT1A0A1B0GTJ5 212 aa13.62□□□□□ -0.23
UBC-208ENST00000540700 TMEM89A2RUT3 159 aa13.62□□□□□ -0.23
UBC-208ENST00000540700 A6NJ64 397 aa13.62□□□□□ -0.23
UBC-208ENST00000540700 NPIPB11E5RHQ5 1161 aa13.62□□□□□ -0.23
UBC-208ENST00000540700 H3BUI4 141 aa13.62□□□□□ -0.23
UBC-208ENST00000540700 XRCC3O43542 346 aa13.62□□□□□ -0.23
UBC-208ENST00000540700 CA11O75493 328 aa13.62□□□□□ -0.23
UBC-208ENST00000540700 HLA-DQB1P01920 261 aa13.62□□□□□ -0.23
UBC-208ENST00000540700 IGHV1-8P0DP01 117 aa13.62□□□□□ -0.23
UBC-208ENST00000540700 PRTN3P24158 256 aa13.62□□□□□ -0.23
UBC-208ENST00000540700 FAM189A2Q15884 450 aa13.62□□□□□ -0.23
UBC-208ENST00000540700 PDZD9Q8IXQ8 264 aa13.62□□□□□ -0.23
UBC-208ENST00000540700 PNKDQ8N490 385 aa13.62□□□□□ -0.23
UBC-208ENST00000540700 MCFD2Q8NI22 146 aa13.62□□□□□ -0.23
UBC-208ENST00000540700 RFESDQ8TAC1 157 aa13.62□□□□□ -0.23
UBC-208ENST00000540700 MAFIPQ8WZ33 124 aa13.62□□□□□ -0.23
UBC-208ENST00000540700 CMSS1Q9BQ75 279 aaKnown RBP13.62□□□□□ -0.23
UBC-208ENST00000540700 ZNF230Q9UIE0 474 aaPredicted RBP13.62□□□□□ -0.23
UBC-208ENST00000540700 TRAPPC2LQ9UL33 140 aa13.62□□□□□ -0.23
UBC-208ENST00000540700 IGKV1D-8A0A087WSZ0 117 aa13.61□□□□□ -0.23
UBC-208ENST00000540700 TRAV40A0A0B4J280 105 aa13.61□□□□□ -0.23
UBC-208ENST00000540700 CENPVL3A0A0U1RRI6 287 aa13.61□□□□□ -0.23
UBC-208ENST00000540700 FAM172BPA6NC97 362 aa13.61□□□□□ -0.23
UBC-208ENST00000540700 ZNF729A6NN14 1252 aaPredicted RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms