RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 RPEL1Q2QD12 228 aa5.33□□□□□ -1.56
PTPRD-214ENST00000540109 SNAI3Q3KNW1 292 aa5.33□□□□□ -1.56
PTPRD-214ENST00000540109 ACSF3Q4G176 576 aaPredicted RBP5.33□□□□□ -1.56
PTPRD-214ENST00000540109 ZNF611Q8N823 705 aa5.33□□□□□ -1.56
PTPRD-214ENST00000540109 ZBTB34Q8NCN2 500 aa5.33□□□□□ -1.56
PTPRD-214ENST00000540109 TRIB1Q96RU8 372 aa5.33□□□□□ -1.56
PTPRD-214ENST00000540109 SRSF8Q9BRL6 282 aaKnown RBP5.33□□□□□ -1.56
PTPRD-214ENST00000540109 SS18L2Q9UHA2 77 aa5.33□□□□□ -1.56
PTPRD-214ENST00000540109 P2RY10O00398 339 aa5.32□□□□□ -1.56
PTPRD-214ENST00000540109 CDIPTO14735 213 aa5.32□□□□□ -1.56
PTPRD-214ENST00000540109 FGF16O43320 207 aa5.32□□□□□ -1.56
PTPRD-214ENST00000540109 IGHG1P01857 330 aa5.32□□□□□ -1.56
PTPRD-214ENST00000540109 ZNF117Q03924 483 aa5.32□□□□□ -1.56
PTPRD-214ENST00000540109 LINC00696Q6ZRV3 163 aa5.32□□□□□ -1.56
PTPRD-214ENST00000540109 PFN4Q8NHR9 129 aa5.32□□□□□ -1.56
PTPRD-214ENST00000540109 ABHD3Q8WU67 409 aa5.32□□□□□ -1.56
PTPRD-214ENST00000540109 OR4C12Q96R67 309 aa5.32□□□□□ -1.56
PTPRD-214ENST00000540109 RARRES2Q99969 163 aa5.32□□□□□ -1.56
PTPRD-214ENST00000540109 CHST5Q9GZS9 411 aa5.32□□□□□ -1.56
PTPRD-214ENST00000540109 CHTOPQ9Y3Y2 248 aaKnown RBP5.32□□□□□ -1.56
PTPRD-214ENST00000540109 PRRC2BQ5JSZ5 2229 aaKnown RBP5.32□□□□□ -1.56
PTPRD-214ENST00000540109 OR4C45A6NMZ5 311 aa5.32□□□□□ -1.56
PTPRD-214ENST00000540109 J3QRE1 110 aa5.32□□□□□ -1.56
PTPRD-214ENST00000540109 ACTL6AO96019 429 aa5.32□□□□□ -1.56
PTPRD-214ENST00000540109 TCN2P20062 427 aa5.32□□□□□ -1.56
PTPRD-214ENST00000540109 MPZP25189 248 aa5.32□□□□□ -1.56
PTPRD-214ENST00000540109 MC5RP33032 325 aa5.32□□□□□ -1.56
PTPRD-214ENST00000540109 WNT5AP41221 380 aa5.32□□□□□ -1.56
PTPRD-214ENST00000540109 H2BFSP57053 126 aa5.32□□□□□ -1.56
PTPRD-214ENST00000540109 SEC11AP67812 179 aa5.32□□□□□ -1.56
PTPRD-214ENST00000540109 EXOSC7Q15024 291 aaKnown RBP5.32□□□□□ -1.56
PTPRD-214ENST00000540109 TMEM177Q53S58 311 aa5.32□□□□□ -1.56
PTPRD-214ENST00000540109 TMEM255AQ5JRV8 349 aa5.32□□□□□ -1.56
PTPRD-214ENST00000540109 SLC25A34Q6PIV7 304 aa5.32□□□□□ -1.56
PTPRD-214ENST00000540109 TRAT1Q6PIZ9 186 aa5.32□□□□□ -1.56
PTPRD-214ENST00000540109 OR2C3Q8N628 320 aa5.32□□□□□ -1.56
PTPRD-214ENST00000540109 BCORP1Q8N888 145 aa5.32□□□□□ -1.56
PTPRD-214ENST00000540109 NAT6Q93015 286 aa5.32□□□□□ -1.56
PTPRD-214ENST00000540109 NRTNQ99748 197 aa5.32□□□□□ -1.56
PTPRD-214ENST00000540109 PARLQ9H300 379 aa5.32□□□□□ -1.56
PTPRD-214ENST00000540109 METTL7AQ9H8H3 244 aa5.32□□□□□ -1.56
PTPRD-214ENST00000540109 CNTD2Q9H8S5 307 aa5.32□□□□□ -1.56
PTPRD-214ENST00000540109 A0A1B0GX78 115 aa5.32□□□□□ -1.56
PTPRD-214ENST00000540109 C19orf67A6NJJ6 358 aa5.32□□□□□ -1.56
PTPRD-214ENST00000540109 IFITM10A6NMD0 228 aa5.32□□□□□ -1.56
PTPRD-214ENST00000540109 M0QZ24 198 aa5.32□□□□□ -1.56
PTPRD-214ENST00000540109 CHEK1O14757 476 aa5.32□□□□□ -1.56
PTPRD-214ENST00000540109 ZNF737O75373 536 aa5.32□□□□□ -1.56
PTPRD-214ENST00000540109 C1QL1O75973 258 aa5.32□□□□□ -1.56
PTPRD-214ENST00000540109 IAPPP10997 89 aa5.32□□□□□ -1.56
PTPRD-214ENST00000540109 FGF5P12034 268 aa5.32□□□□□ -1.56
PTPRD-214ENST00000540109 SLC37A1P57057 533 aa5.32□□□□□ -1.56
PTPRD-214ENST00000540109 SP6Q3SY56 376 aa5.32□□□□□ -1.56
PTPRD-214ENST00000540109 OR11G2Q8NGC1 345 aa5.32□□□□□ -1.56
PTPRD-214ENST00000540109 OR10G8Q8NGN5 311 aa5.32□□□□□ -1.56
PTPRD-214ENST00000540109 ADAT3Q96EY9 351 aaPredicted RBP5.32□□□□□ -1.56
PTPRD-214ENST00000540109 REG4Q9BYZ8 158 aa5.32□□□□□ -1.56
PTPRD-214ENST00000540109 VN1R1Q9GZP7 353 aa5.32□□□□□ -1.56
PTPRD-214ENST00000540109 GPR84Q9NQS5 396 aa5.32□□□□□ -1.56
PTPRD-214ENST00000540109 SHISA7A6NL88 538 aa5.32□□□□□ -1.56
PTPRD-214ENST00000540109 BCAT2O15382 392 aaPredicted RBP5.32□□□□□ -1.56
PTPRD-214ENST00000540109 GDF9O60383 454 aa5.32□□□□□ -1.56
PTPRD-214ENST00000540109 ADH4P08319 380 aa5.32□□□□□ -1.56
PTPRD-214ENST00000540109 TMPRSS3P57727 454 aa5.32□□□□□ -1.56
PTPRD-214ENST00000540109 MMDQ15546 238 aa5.32□□□□□ -1.56
PTPRD-214ENST00000540109 ZNF774Q6NX45 483 aa5.32□□□□□ -1.56
PTPRD-214ENST00000540109 ASCL4Q6XD76 172 aa5.32□□□□□ -1.56
PTPRD-214ENST00000540109 TMEM91Q6ZNR0 172 aa5.32□□□□□ -1.56
PTPRD-214ENST00000540109 OR13G1Q8NGZ3 307 aa5.32□□□□□ -1.56
PTPRD-214ENST00000540109 DIRC2Q96SL1 478 aa5.32□□□□□ -1.56
PTPRD-214ENST00000540109 WDR13Q9H1Z4 485 aa5.32□□□□□ -1.56
PTPRD-214ENST00000540109 TMEM131Q92545 1883 aa5.32□□□□□ -1.56
PTPRD-214ENST00000540109 IGKV3D-11A0A0A0MRZ8 115 aa5.32□□□□□ -1.56
PTPRD-214ENST00000540109 CTXND1A0A1B0GTU2 59 aa5.32□□□□□ -1.56
PTPRD-214ENST00000540109 A0A1W2PR80 420 aa5.32□□□□□ -1.56
PTPRD-214ENST00000540109 C9J4A7 227 aa5.32□□□□□ -1.56
PTPRD-214ENST00000540109 ZNF264O43296 627 aa5.32□□□□□ -1.56
PTPRD-214ENST00000540109 TDGF1P3P51864 188 aa5.32□□□□□ -1.56
PTPRD-214ENST00000540109 GLIPR1L1Q6UWM5 242 aa5.32□□□□□ -1.56
PTPRD-214ENST00000540109 NPSR1Q6W5P4 371 aa5.32□□□□□ -1.56
PTPRD-214ENST00000540109 GALNT14Q96FL9 552 aa5.32□□□□□ -1.56
PTPRD-214ENST00000540109 ANAPC13Q9BS18 74 aa5.32□□□□□ -1.56
PTPRD-214ENST00000540109 MAP1LC3CQ9BXW4 147 aa5.32□□□□□ -1.56
PTPRD-214ENST00000540109 LPAR2Q9HBW0 351 aa5.32□□□□□ -1.56
PTPRD-214ENST00000540109 R4GMQ9 66 aa5.32□□□□□ -1.56
PTPRD-214ENST00000540109 COLCA2A8K830 154 aa5.31□□□□□ -1.56
PTPRD-214ENST00000540109 CT45A10P0DMU9 189 aa5.31□□□□□ -1.56
PTPRD-214ENST00000540109 CXCL12P48061 93 aa5.31□□□□□ -1.56
PTPRD-214ENST00000540109 SLAQ13239 276 aa5.31□□□□□ -1.56
PTPRD-214ENST00000540109 Q1RN00 199 aa5.31□□□□□ -1.56
PTPRD-214ENST00000540109 SPANXN5Q5MJ07 72 aa5.31□□□□□ -1.56
PTPRD-214ENST00000540109 OR10J5Q8NHC4 309 aa5.31□□□□□ -1.56
PTPRD-214ENST00000540109 RNF133Q8WVZ7 376 aa5.31□□□□□ -1.56
PTPRD-214ENST00000540109 SAP30LQ9HAJ7 183 aa5.31□□□□□ -1.56
PTPRD-214ENST00000540109 SF3B6Q9Y3B4 125 aaKnown RBP5.31□□□□□ -1.56
PTPRD-214ENST00000540109 EMC9Q9Y3B6 208 aa5.31□□□□□ -1.56
PTPRD-214ENST00000540109 TIMM10BQ9Y5J6 103 aa5.31□□□□□ -1.56
PTPRD-214ENST00000540109 ARID1AO14497 2285 aa5.31□□□□□ -1.56
PTPRD-214ENST00000540109 TRAV30A0A087WSZ9 112 aa5.31□□□□□ -1.56
PTPRD-214ENST00000540109 GRIFINA4D1Z8 144 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms