RNA–Protein interactions for RNA: ENST00000540021.5

MSH6-210, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 3,930 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-210ENST00000540021 NXPH2O95156 264 aa11.2□□□□□ -0.62
MSH6-210ENST00000540021 RBM11P57052 281 aaKnown RBP11.2□□□□□ -0.62
MSH6-210ENST00000540021 NXPH1P58417 271 aa11.2□□□□□ -0.62
MSH6-210ENST00000540021 ENDOGQ14249 297 aaKnown RBP11.2□□□□□ -0.62
MSH6-210ENST00000540021 ELOBQ15370 118 aa11.2□□□□□ -0.62
MSH6-210ENST00000540021 FAM89BQ8N5H3 189 aa11.2□□□□□ -0.62
MSH6-210ENST00000540021 MUCL1Q96DR8 90 aa11.2□□□□□ -0.62
MSH6-210ENST00000540021 MSL2Q9HCI7 577 aa11.2□□□□□ -0.62
MSH6-210ENST00000540021 GCM1Q9NP62 436 aa11.2□□□□□ -0.62
MSH6-210ENST00000540021 RPRMQ9NS64 109 aa11.2□□□□□ -0.62
MSH6-210ENST00000540021 PRSS50Q9UI38 385 aa11.2□□□□□ -0.62
MSH6-210ENST00000540021 TIMM8BQ9Y5J9 83 aaPredicted RBP11.2□□□□□ -0.62
MSH6-210ENST00000540021 DOCK11Q5JSL3 2073 aa11.2□□□□□ -0.62
MSH6-210ENST00000540021 SOD3P08294 240 aa11.2□□□□□ -0.62
MSH6-210ENST00000540021 ZNF17P17021 662 aa11.2□□□□□ -0.62
MSH6-210ENST00000540021 TAS2R30P59541 319 aa11.2□□□□□ -0.62
MSH6-210ENST00000540021 Q3ZCU0 254 aa11.2□□□□□ -0.62
MSH6-210ENST00000540021 ABHD3Q8WU67 409 aa11.2□□□□□ -0.62
MSH6-210ENST00000540021 TAAR9Q96RI9 348 aa11.2□□□□□ -0.62
MSH6-210ENST00000540021 SIRT7Q9NRC8 400 aa11.2□□□□□ -0.62
MSH6-210ENST00000540021 LYRM2Q9NU23 88 aaPredicted RBP11.2□□□□□ -0.62
MSH6-210ENST00000540021 SYNGR2O43760 224 aa11.2□□□□□ -0.62
MSH6-210ENST00000540021 OPN1MWP04001 364 aa11.2□□□□□ -0.62
MSH6-210ENST00000540021 OPN1MW2P0DN77 364 aa11.2□□□□□ -0.62
MSH6-210ENST00000540021 OPN1MW3P0DN78 364 aa11.2□□□□□ -0.62
MSH6-210ENST00000540021 BCL2P10415 239 aa11.2□□□□□ -0.62
MSH6-210ENST00000540021 DSCR4P56555 118 aaPredicted RBP11.2□□□□□ -0.62
MSH6-210ENST00000540021 SLC38A11Q08AI6 406 aa11.2□□□□□ -0.62
MSH6-210ENST00000540021 CALHM1Q8IU99 346 aa11.2□□□□□ -0.62
MSH6-210ENST00000540021 IL22RA2Q969J5 263 aa11.2□□□□□ -0.62
MSH6-210ENST00000540021 ATG101Q9BSB4 218 aa11.2□□□□□ -0.62
MSH6-210ENST00000540021 LIME1Q9H400 295 aa11.2□□□□□ -0.62
MSH6-210ENST00000540021 NCOA6Q14686 2063 aaPredicted RBP11.2□□□□□ -0.62
MSH6-210ENST00000540021 C3orf80F5H4A9 247 aa11.19□□□□□ -0.62
MSH6-210ENST00000540021 K7N7A8 449 aa11.19□□□□□ -0.62
MSH6-210ENST00000540021 HSPB1P04792 205 aaKnown RBP11.19□□□□□ -0.62
MSH6-210ENST00000540021 GLIPR1P48060 266 aa11.19□□□□□ -0.62
MSH6-210ENST00000540021 PSG4Q00888 419 aa11.19□□□□□ -0.62
MSH6-210ENST00000540021 PDLIM3Q53GG5 364 aaPredicted RBP11.19□□□□□ -0.62
MSH6-210ENST00000540021 C16orf82Q7Z2V1 217 aa11.19□□□□□ -0.62
MSH6-210ENST00000540021 SMOC1Q9H4F8 434 aa11.19□□□□□ -0.62
MSH6-210ENST00000540021 Q9N2K0 584 aa11.19□□□□□ -0.62
MSH6-210ENST00000540021 HS3ST3B1Q9Y662 390 aa11.19□□□□□ -0.62
MSH6-210ENST00000540021 GPX4P36969 197 aaPredicted RBP11.19□□□□□ -0.62
MSH6-210ENST00000540021 C21orf62-AS1Q17RA5 79 aa11.19□□□□□ -0.62
MSH6-210ENST00000540021 FAM78BQ5VT40 261 aa11.19□□□□□ -0.62
MSH6-210ENST00000540021 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.19□□□□□ -0.62
MSH6-210ENST00000540021 SELENOHQ8IZQ5 122 aaKnown RBP11.19□□□□□ -0.62
MSH6-210ENST00000540021 PCGF1Q9BSM1 259 aa11.19□□□□□ -0.62
MSH6-210ENST00000540021 OCIAD1Q9NX40 245 aa11.19□□□□□ -0.62
MSH6-210ENST00000540021 IL36RNQ9UBH0 155 aa11.19□□□□□ -0.62
MSH6-210ENST00000540021 DVL1O14640 695 aa11.19□□□□□ -0.62
MSH6-210ENST00000540021 CRYAAP02489 173 aa11.19□□□□□ -0.62
MSH6-210ENST00000540021 CTXN2P0C2S0 81 aa11.19□□□□□ -0.62
MSH6-210ENST00000540021 FKBP2P26885 142 aaKnown RBP11.19□□□□□ -0.62
MSH6-210ENST00000540021 SUCLG1P53597 346 aaKnown RBP11.19□□□□□ -0.62
MSH6-210ENST00000540021 SSTP61278 116 aa11.19□□□□□ -0.62
MSH6-210ENST00000540021 FIP1L1Q6UN15 594 aaKnown RBP11.19□□□□□ -0.62
MSH6-210ENST00000540021 BAGE3Q86Y29 109 aa11.19□□□□□ -0.62
MSH6-210ENST00000540021 BAGE2Q86Y30 109 aa11.19□□□□□ -0.62
MSH6-210ENST00000540021 RHBDD1Q8TEB9 315 aa11.19□□□□□ -0.62
MSH6-210ENST00000540021 GALNT14Q96FL9 552 aa11.19□□□□□ -0.62
MSH6-210ENST00000540021 FAM103A1Q9BTL3 118 aaKnown RBP11.19□□□□□ -0.62
MSH6-210ENST00000540021 PITPNC1Q9UKF7 332 aa11.19□□□□□ -0.62
MSH6-210ENST00000540021 SPINK4O60575 86 aa11.18□□□□□ -0.62
MSH6-210ENST00000540021 RTP5Q14D33 572 aa11.18□□□□□ -0.62
MSH6-210ENST00000540021 MSMO1Q15800 293 aa11.18□□□□□ -0.62
MSH6-210ENST00000540021 OR10D3Q8NH80 312 aa11.18□□□□□ -0.62
MSH6-210ENST00000540021 TM2D1Q9BX74 207 aa11.18□□□□□ -0.62
MSH6-210ENST00000540021 GLRX2Q9NS18 164 aa11.18□□□□□ -0.62
MSH6-210ENST00000540021 ROS1P08922 2347 aa11.18□□□□□ -0.62
MSH6-210ENST00000540021 MDFIC2A0A1B0GVS7 189 aa11.18□□□□□ -0.62
MSH6-210ENST00000540021 CBR3O75828 277 aa11.18□□□□□ -0.62
MSH6-210ENST00000540021 ICAM4Q14773 271 aa11.18□□□□□ -0.62
MSH6-210ENST00000540021 TMEM211Q6ICI0 200 aa11.18□□□□□ -0.62
MSH6-210ENST00000540021 MSI2Q96DH6 328 aaKnown RBP11.18□□□□□ -0.62
MSH6-210ENST00000540021 RAB40CQ96S21 281 aa11.18□□□□□ -0.62
MSH6-210ENST00000540021 RBKSQ9H477 322 aa11.18□□□□□ -0.62
MSH6-210ENST00000540021 SERTAD4Q9NUC0 356 aa11.18□□□□□ -0.62
MSH6-210ENST00000540021 PLA2G3Q9NZ20 509 aa11.18□□□□□ -0.62
MSH6-210ENST00000540021 LYL1P12980 280 aa11.18□□□□□ -0.62
MSH6-210ENST00000540021 NDUFB7P17568 137 aa11.18□□□□□ -0.62
MSH6-210ENST00000540021 MDH2P40926 338 aaKnown RBP11.18□□□□□ -0.62
MSH6-210ENST00000540021 FAM3BP58499 235 aaPredicted RBP11.18□□□□□ -0.62
MSH6-210ENST00000540021 CFHR1Q03591 330 aa11.18□□□□□ -0.62
MSH6-210ENST00000540021 FFAR4Q5NUL3 377 aa11.18□□□□□ -0.62
MSH6-210ENST00000540021 LINC00696Q6ZRV3 163 aa11.18□□□□□ -0.62
MSH6-210ENST00000540021 CXorf67Q86X51 503 aaPredicted RBP11.18□□□□□ -0.62
MSH6-210ENST00000540021 TGIF2LXQ8IUE1 241 aa11.18□□□□□ -0.62
MSH6-210ENST00000540021 TMEM171Q8WVE6 324 aa11.18□□□□□ -0.62
MSH6-210ENST00000540021 TMEM204Q9BSN7 226 aa11.18□□□□□ -0.62
MSH6-210ENST00000540021 VAX2Q9UIW0 290 aa11.18□□□□□ -0.62
MSH6-210ENST00000540021 IGHV2-70P01814 119 aa11.17□□□□□ -0.62
MSH6-210ENST00000540021 EGR1P18146 543 aa11.17□□□□□ -0.62
MSH6-210ENST00000540021 CA6P23280 308 aa11.17□□□□□ -0.62
MSH6-210ENST00000540021 PNRC1Q12796 327 aaPredicted RBP11.17□□□□□ -0.62
MSH6-210ENST00000540021 OR8G1Q15617 311 aa11.17□□□□□ -0.62
MSH6-210ENST00000540021 TOMM20LQ6UXN7 152 aa11.17□□□□□ -0.62
MSH6-210ENST00000540021 SLC35E3Q7Z769 313 aa11.17□□□□□ -0.62
MSH6-210ENST00000540021 SLC25A45Q8N413 288 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms