RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 CDH26Q8IXH8 852 aa13.36□□□□□ -0.27
DDB1-215ENST00000539712 NRG4Q8WWG1 115 aa13.36□□□□□ -0.27
DDB1-215ENST00000539712 SGCDQ92629 289 aa13.36□□□□□ -0.27
DDB1-215ENST00000539712 CKLFQ9UBR5 152 aa13.36□□□□□ -0.27
DDB1-215ENST00000539712 TMEM30CPA0ZSE6 113 aa13.35□□□□□ -0.27
DDB1-215ENST00000539712 G3V4G9 280 aa13.35□□□□□ -0.27
DDB1-215ENST00000539712 GZMHP20718 246 aa13.35□□□□□ -0.27
DDB1-215ENST00000539712 LOXL3P58215 753 aa13.35□□□□□ -0.27
DDB1-215ENST00000539712 CD83Q01151 205 aa13.35□□□□□ -0.27
DDB1-215ENST00000539712 ABCA11PQ4W5N1 156 aa13.35□□□□□ -0.27
DDB1-215ENST00000539712 RNLSQ5VYX0 342 aa13.35□□□□□ -0.27
DDB1-215ENST00000539712 CCDC144NLQ6NUI1 221 aa13.35□□□□□ -0.27
DDB1-215ENST00000539712 GLIPR1L1Q6UWM5 242 aa13.35□□□□□ -0.27
DDB1-215ENST00000539712 UNQ9370/PRO34162Q6UXP9 181 aa13.35□□□□□ -0.27
DDB1-215ENST00000539712 NDUFA11Q86Y39 141 aa13.35□□□□□ -0.27
DDB1-215ENST00000539712 THNSL2Q86YJ6 484 aa13.35□□□□□ -0.27
DDB1-215ENST00000539712 STX19Q8N4C7 294 aa13.35□□□□□ -0.27
DDB1-215ENST00000539712 TMEM104Q8NE00 496 aa13.35□□□□□ -0.27
DDB1-215ENST00000539712 MRPS28Q9Y2Q9 187 aaKnown RBP13.35□□□□□ -0.27
DDB1-215ENST00000539712 A0A1W2PPE3 182 aa13.34□□□□□ -0.27
DDB1-215ENST00000539712 MAS1P04201 325 aa13.34□□□□□ -0.27
DDB1-215ENST00000539712 CDK1P06493 297 aa13.34□□□□□ -0.27
DDB1-215ENST00000539712 LPLP06858 475 aa13.34□□□□□ -0.27
DDB1-215ENST00000539712 MNDAP41218 407 aa13.34□□□□□ -0.27
DDB1-215ENST00000539712 EMX1Q04741 257 aaPredicted RBP13.34□□□□□ -0.27
DDB1-215ENST00000539712 MADCAM1Q13477 382 aa13.34□□□□□ -0.27
DDB1-215ENST00000539712 BEAN1Q3B7T3 259 aa13.34□□□□□ -0.27
DDB1-215ENST00000539712 C6orf141Q5SZD1 244 aa13.34□□□□□ -0.27
DDB1-215ENST00000539712 ATAD3CQ5T2N8 411 aa13.34□□□□□ -0.27
DDB1-215ENST00000539712 KPRPQ5T749 579 aaPredicted RBP13.34□□□□□ -0.27
DDB1-215ENST00000539712 SAMD5Q5TGI4 173 aa13.34□□□□□ -0.27
DDB1-215ENST00000539712 SIGIRRQ6IA17 410 aa13.34□□□□□ -0.27
DDB1-215ENST00000539712 GAPTQ8N292 157 aa13.34□□□□□ -0.27
DDB1-215ENST00000539712 JAGN1Q8N5M9 183 aa13.34□□□□□ -0.27
DDB1-215ENST00000539712 DRAM1Q8N682 238 aa13.34□□□□□ -0.27
DDB1-215ENST00000539712 OR5AU1Q8NGC0 362 aa13.34□□□□□ -0.27
DDB1-215ENST00000539712 OR56B4Q8NH76 319 aa13.34□□□□□ -0.27
DDB1-215ENST00000539712 UBALD1Q8TB05 177 aa13.34□□□□□ -0.27
DDB1-215ENST00000539712 CCDC107Q8WV48 283 aa13.34□□□□□ -0.27
DDB1-215ENST00000539712 TOMM40LQ969M1 308 aa13.34□□□□□ -0.27
DDB1-215ENST00000539712 RPEQ96AT9 228 aa13.34□□□□□ -0.27
DDB1-215ENST00000539712 MRPS24Q96EL2 167 aaKnown RBP13.34□□□□□ -0.27
DDB1-215ENST00000539712 AKR1E2Q96JD6 320 aa13.34□□□□□ -0.27
DDB1-215ENST00000539712 S100A13Q99584 98 aa13.34□□□□□ -0.27
DDB1-215ENST00000539712 DCLRE1BQ9H816 532 aa13.34□□□□□ -0.27
DDB1-215ENST00000539712 LSM2Q9Y333 95 aaKnown RBP13.34□□□□□ -0.27
DDB1-215ENST00000539712 H3BUI4 141 aa13.33□□□□□ -0.28
DDB1-215ENST00000539712 MYL12BO14950 172 aa13.33□□□□□ -0.28
DDB1-215ENST00000539712 SNRNP70P08621 437 aaKnown RBP13.33□□□□□ -0.28
DDB1-215ENST00000539712 FAM106CPP0CH98 169 aa13.33□□□□□ -0.28
DDB1-215ENST00000539712 VHLP40337 213 aa13.33□□□□□ -0.28
DDB1-215ENST00000539712 GNG10P50151 68 aa13.33□□□□□ -0.28
DDB1-215ENST00000539712 ARHGDIBP52566 201 aa13.33□□□□□ -0.28
DDB1-215ENST00000539712 GPR176Q14439 515 aa13.33□□□□□ -0.28
DDB1-215ENST00000539712 FAM27D1Q5T7N8 215 aa13.33□□□□□ -0.28
DDB1-215ENST00000539712 C10orf99Q6UWK7 81 aa13.33□□□□□ -0.28
DDB1-215ENST00000539712 OR52M1Q8NGK5 317 aa13.33□□□□□ -0.28
DDB1-215ENST00000539712 CAPSLQ8WWF8 208 aa13.33□□□□□ -0.28
DDB1-215ENST00000539712 ARL11Q969Q4 196 aa13.33□□□□□ -0.28
DDB1-215ENST00000539712 BANF2Q9H503 90 aa13.33□□□□□ -0.28
DDB1-215ENST00000539712 PCDHB16Q9NRJ7 776 aa13.33□□□□□ -0.28
DDB1-215ENST00000539712 AMMECR1Q9Y4X0 333 aaPredicted RBP13.33□□□□□ -0.28
DDB1-215ENST00000539712 ORC5O43913 435 aa13.32□□□□□ -0.28
DDB1-215ENST00000539712 PEX14O75381 377 aa13.32□□□□□ -0.28
DDB1-215ENST00000539712 IRF3Q14653 427 aa13.32□□□□□ -0.28
DDB1-215ENST00000539712 RAB12Q6IQ22 244 aa13.32□□□□□ -0.28
DDB1-215ENST00000539712 LINC00311Q8N616 119 aa13.32□□□□□ -0.28
DDB1-215ENST00000539712 C8orf31Q8N9H6 132 aa13.32□□□□□ -0.28
DDB1-215ENST00000539712 ST6GALNAC6Q969X2 333 aa13.32□□□□□ -0.28
DDB1-215ENST00000539712 Q96M66 194 aa13.32□□□□□ -0.28
DDB1-215ENST00000539712 GFOD1Q9NXC2 390 aa13.32□□□□□ -0.28
DDB1-215ENST00000539712 ERGIC3Q9Y282 383 aa13.32□□□□□ -0.28
DDB1-215ENST00000539712 C12orf77C9JDV5 145 aa13.31□□□□□ -0.28
DDB1-215ENST00000539712 PTGES3LE9PB15 166 aa13.31□□□□□ -0.28
DDB1-215ENST00000539712 SC5DO75845 299 aa13.31□□□□□ -0.28
DDB1-215ENST00000539712 CD37P11049 281 aa13.31□□□□□ -0.28
DDB1-215ENST00000539712 MGMTP16455 207 aa13.31□□□□□ -0.28
DDB1-215ENST00000539712 RAB7AP51149 207 aa13.31□□□□□ -0.28
DDB1-215ENST00000539712 AQP4P55087 323 aa13.31□□□□□ -0.28
DDB1-215ENST00000539712 EBI3Q14213 229 aa13.31□□□□□ -0.28
DDB1-215ENST00000539712 ACSM3Q53FZ2 586 aa13.31□□□□□ -0.28
DDB1-215ENST00000539712 ARSJQ5FYB0 599 aaPredicted RBP13.31□□□□□ -0.28
DDB1-215ENST00000539712 AWAT2Q6E213 333 aa13.31□□□□□ -0.28
DDB1-215ENST00000539712 LRRTM1Q86UE6 522 aa13.31□□□□□ -0.28
DDB1-215ENST00000539712 OR8H3Q8N146 312 aa13.31□□□□□ -0.28
DDB1-215ENST00000539712 ZNF439Q8NDP4 499 aa13.31□□□□□ -0.28
DDB1-215ENST00000539712 OR10X1Q8NGY0 326 aa13.31□□□□□ -0.28
DDB1-215ENST00000539712 R3HDM4Q96D70 268 aa13.31□□□□□ -0.28
DDB1-215ENST00000539712 UQCC2Q9BRT2 126 aa13.31□□□□□ -0.28
DDB1-215ENST00000539712 SELENOIQ9C0D9 397 aa13.31□□□□□ -0.28
DDB1-215ENST00000539712 SPACA1Q9HBV2 294 aa13.31□□□□□ -0.28
DDB1-215ENST00000539712 IGHV3-43A0A0B4J1X8 118 aa13.3□□□□□ -0.28
DDB1-215ENST00000539712 FAM90A10PA6NDY2 464 aa13.3□□□□□ -0.28
DDB1-215ENST00000539712 FAM90A7PA6NKC0 464 aa13.3□□□□□ -0.28
DDB1-215ENST00000539712 FAM90A23PA8MXZ1 464 aa13.3□□□□□ -0.28
DDB1-215ENST00000539712 MCRIP1C9JLW8 97 aa13.3□□□□□ -0.28
DDB1-215ENST00000539712 M0QZK8 103 aa13.3□□□□□ -0.28
DDB1-215ENST00000539712 AIPO00170 330 aa13.3□□□□□ -0.28
DDB1-215ENST00000539712 SDCBPO00560 298 aaPredicted RBP13.3□□□□□ -0.28
DDB1-215ENST00000539712 SLC31A2O15432 143 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms