RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 IGSF11Q5DX21 431 aa8.61□□□□□ -1.03
SPARC-209ENST00000539687 GGNBP1Q5YKI7 109 aa8.61□□□□□ -1.03
SPARC-209ENST00000539687 THOC7Q6I9Y2 204 aaKnown RBP8.61□□□□□ -1.03
SPARC-209ENST00000539687 ACP7Q6ZNF0 438 aa8.61□□□□□ -1.03
SPARC-209ENST00000539687 LDLRAD3Q86YD5 345 aa8.61□□□□□ -1.03
SPARC-209ENST00000539687 ZNF695Q8IW36 515 aa8.61□□□□□ -1.03
SPARC-209ENST00000539687 H1FOOQ8IZA3 346 aaPredicted RBP8.61□□□□□ -1.03
SPARC-209ENST00000539687 BATF2Q8N1L9 274 aa8.61□□□□□ -1.03
SPARC-209ENST00000539687 BVESQ8NE79 360 aa8.61□□□□□ -1.03
SPARC-209ENST00000539687 ST8SIA2Q92186 375 aa8.61□□□□□ -1.03
SPARC-209ENST00000539687 C18orf12Q96KH6 178 aa8.61□□□□□ -1.03
SPARC-209ENST00000539687 ZNF488Q96MN9 340 aa8.61□□□□□ -1.03
SPARC-209ENST00000539687 DOCK7Q96N67 2140 aa8.61□□□□□ -1.03
SPARC-209ENST00000539687 DNTTIP1Q9H147 329 aa8.61□□□□□ -1.03
SPARC-209ENST00000539687 LIME1Q9H400 295 aa8.61□□□□□ -1.03
SPARC-209ENST00000539687 PFDN2Q9UHV9 154 aa8.61□□□□□ -1.03
SPARC-209ENST00000539687 ZDHHC8Q9ULC8 765 aa8.61□□□□□ -1.03
SPARC-209ENST00000539687 UBE2J1Q9Y385 318 aaPredicted RBP8.61□□□□□ -1.03
SPARC-209ENST00000539687 FREM1Q5H8C1 2179 aa8.61□□□□□ -1.03
SPARC-209ENST00000539687 ZFYVE26Q68DK2 2539 aa8.6□□□□□ -1.03
SPARC-209ENST00000539687 RPS10-NUDT3A0A1W2PQS6 291 aa8.6□□□□□ -1.03
SPARC-209ENST00000539687 hCG_1807616A0A1W2PRN6 198 aa8.6□□□□□ -1.03
SPARC-209ENST00000539687 ANKRD34BA5PLL1 514 aa8.6□□□□□ -1.03
SPARC-209ENST00000539687 RNF222A6NCQ9 220 aa8.6□□□□□ -1.03
SPARC-209ENST00000539687 E5RGE8 158 aa8.6□□□□□ -1.03
SPARC-209ENST00000539687 F5H0A9 414 aaPredicted RBP8.6□□□□□ -1.03
SPARC-209ENST00000539687 SIRPB1O00241 398 aa8.6□□□□□ -1.03
SPARC-209ENST00000539687 ZNHIT1O43257 154 aa8.6□□□□□ -1.03
SPARC-209ENST00000539687 HSPA12AO43301 675 aa8.6□□□□□ -1.03
SPARC-209ENST00000539687 PVALBP20472 110 aaPredicted RBP8.6□□□□□ -1.03
SPARC-209ENST00000539687 BMP5P22003 454 aa8.6□□□□□ -1.03
SPARC-209ENST00000539687 GNRHRP30968 328 aa8.6□□□□□ -1.03
SPARC-209ENST00000539687 GATA4P43694 442 aa8.6□□□□□ -1.03
SPARC-209ENST00000539687 LUMP51884 338 aaPredicted RBP8.6□□□□□ -1.03
SPARC-209ENST00000539687 S100A10P60903 97 aa8.6□□□□□ -1.03
SPARC-209ENST00000539687 WDR82Q6UXN9 313 aa8.6□□□□□ -1.03
SPARC-209ENST00000539687 PDZD9Q8IXQ8 264 aa8.6□□□□□ -1.03
SPARC-209ENST00000539687 CISD2Q8N5K1 135 aaKnown RBP8.6□□□□□ -1.03
SPARC-209ENST00000539687 Q8NA96 180 aa8.6□□□□□ -1.03
SPARC-209ENST00000539687 OR10V1Q8NGI7 309 aa8.6□□□□□ -1.03
SPARC-209ENST00000539687 OR5D13Q8NGL4 314 aa8.6□□□□□ -1.03
SPARC-209ENST00000539687 SECTM1Q8WVN6 248 aa8.6□□□□□ -1.03
SPARC-209ENST00000539687 MSI2Q96DH6 328 aaKnown RBP8.6□□□□□ -1.03
SPARC-209ENST00000539687 TMEM56Q96MV1 263 aa8.6□□□□□ -1.03
SPARC-209ENST00000539687 VKORC1Q9BQB6 163 aa8.6□□□□□ -1.03
SPARC-209ENST00000539687 ZNF471Q9BX82 626 aaPredicted RBP8.6□□□□□ -1.03
SPARC-209ENST00000539687 SHARPINQ9H0F6 387 aa8.6□□□□□ -1.03
SPARC-209ENST00000539687 TMEM222Q9H0R3 208 aa8.6□□□□□ -1.03
SPARC-209ENST00000539687 JKAMPQ9P055 326 aa8.6□□□□□ -1.03
SPARC-209ENST00000539687 GSKIPQ9P0R6 139 aa8.6□□□□□ -1.03
SPARC-209ENST00000539687 LUZP4Q9P127 313 aa8.6□□□□□ -1.03
SPARC-209ENST00000539687 IL36RNQ9UBH0 155 aa8.6□□□□□ -1.03
SPARC-209ENST00000539687 NSG2Q9Y328 171 aa8.6□□□□□ -1.03
SPARC-209ENST00000539687 TMEM56-RWDD3S4R434 201 aa8.6□□□□□ -1.03
SPARC-209ENST00000539687 CEP295Q9C0D2 2601 aa8.6□□□□□ -1.03
SPARC-209ENST00000539687 SETXQ7Z333 2677 aaKnown RBP8.59□□□□□ -1.03
SPARC-209ENST00000539687 H0YL77 283 aa8.59□□□□□ -1.03
SPARC-209ENST00000539687 K7EPK0 472 aa8.59□□□□□ -1.03
SPARC-209ENST00000539687 ERVH48-1M5A8F1 160 aa8.59□□□□□ -1.03
SPARC-209ENST00000539687 ST8SIA3O43173 380 aa8.59□□□□□ -1.03
SPARC-209ENST00000539687 DEDDO75618 318 aa8.59□□□□□ -1.03
SPARC-209ENST00000539687 ATG12O94817 140 aa8.59□□□□□ -1.03
SPARC-209ENST00000539687 RRASP10301 218 aa8.59□□□□□ -1.03
SPARC-209ENST00000539687 SFTPCP11686 197 aa8.59□□□□□ -1.03
SPARC-209ENST00000539687 SLC25A6P12236 298 aa8.59□□□□□ -1.03
SPARC-209ENST00000539687 MMP9P14780 707 aa8.59□□□□□ -1.03
SPARC-209ENST00000539687 UCP1P25874 307 aa8.59□□□□□ -1.03
SPARC-209ENST00000539687 CD40P25942 277 aa8.59□□□□□ -1.03
SPARC-209ENST00000539687 GNMTQ14749 295 aa8.59□□□□□ -1.03
SPARC-209ENST00000539687 HERPUD1Q15011 391 aa8.59□□□□□ -1.03
SPARC-209ENST00000539687 ALKBH6Q3KRA9 238 aa8.59□□□□□ -1.03
SPARC-209ENST00000539687 GPR157Q5UAW9 335 aa8.59□□□□□ -1.03
SPARC-209ENST00000539687 PCSK4Q6UW60 755 aa8.59□□□□□ -1.03
SPARC-209ENST00000539687 Q6ZPA2 131 aa8.59□□□□□ -1.03
SPARC-209ENST00000539687 TBC1D26Q86UD7 250 aa8.59□□□□□ -1.03
SPARC-209ENST00000539687 C11orf53Q8IXP5 236 aa8.59□□□□□ -1.03
SPARC-209ENST00000539687 FAM71E2Q8N5Q1 922 aa8.59□□□□□ -1.03
SPARC-209ENST00000539687 TCTEX1D1Q8N7M0 179 aa8.59□□□□□ -1.03
SPARC-209ENST00000539687 OR2Z1Q8NG97 314 aa8.59□□□□□ -1.03
SPARC-209ENST00000539687 OR11L1Q8NGX0 322 aa8.59□□□□□ -1.03
SPARC-209ENST00000539687 LRRC29Q8WV35 223 aa8.59□□□□□ -1.03
SPARC-209ENST00000539687 RND1Q92730 232 aa8.59□□□□□ -1.03
SPARC-209ENST00000539687 NINJ1Q92982 152 aa8.59□□□□□ -1.03
SPARC-209ENST00000539687 GALMQ96C23 342 aa8.59□□□□□ -1.03
SPARC-209ENST00000539687 LRRC46Q96FV0 321 aa8.59□□□□□ -1.03
SPARC-209ENST00000539687 OR10C1Q96KK4 312 aa8.59□□□□□ -1.03
SPARC-209ENST00000539687 LURAP1Q96LR2 239 aa8.59□□□□□ -1.03
SPARC-209ENST00000539687 TOLLIPQ9H0E2 274 aa8.59□□□□□ -1.03
SPARC-209ENST00000539687 NCOR1P1Q9H4R4 102 aa8.59□□□□□ -1.03
SPARC-209ENST00000539687 ZC4H2Q9NQZ6 224 aa8.59□□□□□ -1.03
SPARC-209ENST00000539687 LIN7CQ9NUP9 197 aaKnown RBP8.59□□□□□ -1.03
SPARC-209ENST00000539687 DUSP13Q9UII6 198 aa8.59□□□□□ -1.03
SPARC-209ENST00000539687 AKAP13Q12802 2813 aa8.59□□□□□ -1.03
SPARC-209ENST00000539687 GCN1Q92616 2671 aaKnown RBP8.58□□□□□ -1.04
SPARC-209ENST00000539687 A0A0G2JNJ9 132 aa8.58□□□□□ -1.04
SPARC-209ENST00000539687 NUDT19A8MXV4 375 aa8.58□□□□□ -1.04
SPARC-209ENST00000539687 SRRM5B3KS81 715 aa8.58□□□□□ -1.04
SPARC-209ENST00000539687 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.58□□□□□ -1.04
SPARC-209ENST00000539687 SPDEFO95238 335 aa8.58□□□□□ -1.04
SPARC-209ENST00000539687 CFDP00746 253 aaPredicted RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms