RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 IL13RA2Q14627 380 aa11.98□□□□□ -0.49
UBE3B-210ENST00000539599 FAM180AQ6UWF9 173 aa11.98□□□□□ -0.49
UBE3B-210ENST00000539599 Q6ZRM9 215 aa11.98□□□□□ -0.49
UBE3B-210ENST00000539599 GCNT2Q8N0V5 402 aa11.98□□□□□ -0.49
UBE3B-210ENST00000539599 DEFB123Q8N688 67 aa11.98□□□□□ -0.49
UBE3B-210ENST00000539599 TMEM45BQ96B21 275 aa11.98□□□□□ -0.49
UBE3B-210ENST00000539599 CACNA1HO95180 2353 aa11.98□□□□□ -0.49
UBE3B-210ENST00000539599 DOCK11Q5JSL3 2073 aa11.98□□□□□ -0.49
UBE3B-210ENST00000539599 C19orf67A6NJJ6 358 aa11.98□□□□□ -0.49
UBE3B-210ENST00000539599 K7N7A8 449 aa11.98□□□□□ -0.49
UBE3B-210ENST00000539599 WRBO00258 174 aa11.98□□□□□ -0.49
UBE3B-210ENST00000539599 ZNF16P17020 682 aaPredicted RBP11.98□□□□□ -0.49
UBE3B-210ENST00000539599 OR2B8PP59922 312 aa11.98□□□□□ -0.49
UBE3B-210ENST00000539599 CXorf67Q86X51 503 aaPredicted RBP11.98□□□□□ -0.49
UBE3B-210ENST00000539599 MKXQ8IYA7 352 aa11.98□□□□□ -0.49
UBE3B-210ENST00000539599 APOBEC3DQ96AK3 386 aaPredicted RBP11.98□□□□□ -0.49
UBE3B-210ENST00000539599 SPRY4Q9C004 299 aa11.98□□□□□ -0.49
UBE3B-210ENST00000539599 TAAR3PQ9P1P4 343 aa11.98□□□□□ -0.49
UBE3B-210ENST00000539599 ZNF391Q9UJN7 358 aa11.98□□□□□ -0.49
UBE3B-210ENST00000539599 PPP1R3CQ9UQK1 317 aa11.98□□□□□ -0.49
UBE3B-210ENST00000539599 CACNA1GO43497 2377 aa11.98□□□□□ -0.49
UBE3B-210ENST00000539599 ZNF727A8MUV8 499 aa11.97□□□□□ -0.49
UBE3B-210ENST00000539599 PGLYRP1O75594 196 aaPredicted RBP11.97□□□□□ -0.49
UBE3B-210ENST00000539599 IAPPP10997 89 aa11.97□□□□□ -0.49
UBE3B-210ENST00000539599 SRSF6Q13247 344 aaKnown RBP11.97□□□□□ -0.49
UBE3B-210ENST00000539599 SHEQ5VZ18 495 aa11.97□□□□□ -0.49
UBE3B-210ENST00000539599 WDR86Q86TI4 376 aa11.97□□□□□ -0.49
UBE3B-210ENST00000539599 MDP1Q86V88 176 aa11.97□□□□□ -0.49
UBE3B-210ENST00000539599 IQCF2Q8IXL9 164 aa11.97□□□□□ -0.49
UBE3B-210ENST00000539599 OR1K1Q8NGR3 316 aa11.97□□□□□ -0.49
UBE3B-210ENST00000539599 DMXL2Q8TDJ6 3036 aa11.97□□□□□ -0.49
UBE3B-210ENST00000539599 GPR157Q5UAW9 335 aa11.97□□□□□ -0.49
UBE3B-210ENST00000539599 BCL2L14Q9BZR8 327 aa11.97□□□□□ -0.49
UBE3B-210ENST00000539599 CNOT4O95628 575 aaKnown RBP11.96□□□□□ -0.49
UBE3B-210ENST00000539599 CDS2O95674 445 aa11.96□□□□□ -0.49
UBE3B-210ENST00000539599 VAMP2P63027 116 aa11.96□□□□□ -0.49
UBE3B-210ENST00000539599 NMSQ5H8A3 153 aa11.96□□□□□ -0.49
UBE3B-210ENST00000539599 ZNF295-AS1Q8N0V1 137 aa11.96□□□□□ -0.49
UBE3B-210ENST00000539599 OR5P3Q8WZ94 311 aa11.96□□□□□ -0.49
UBE3B-210ENST00000539599 SMCO4Q9NRQ5 59 aa11.96□□□□□ -0.49
UBE3B-210ENST00000539599 USF3Q68DE3 2245 aa11.96□□□□□ -0.49
UBE3B-210ENST00000539599 PCNX2A6NKB5 2137 aa11.96□□□□□ -0.49
UBE3B-210ENST00000539599 LINC01387J3KSC0 135 aa11.96□□□□□ -0.49
UBE3B-210ENST00000539599 TXNL1O43396 289 aa11.96□□□□□ -0.49
UBE3B-210ENST00000539599 PAX9P55771 341 aa11.96□□□□□ -0.49
UBE3B-210ENST00000539599 RPS16P62249 146 aaKnown RBP11.96□□□□□ -0.49
UBE3B-210ENST00000539599 OR2B11Q5JQS5 317 aa11.96□□□□□ -0.49
UBE3B-210ENST00000539599 SLC16A13Q7RTY0 426 aa11.96□□□□□ -0.49
UBE3B-210ENST00000539599 MCEMP1Q8IX19 187 aa11.96□□□□□ -0.49
UBE3B-210ENST00000539599 SFT2D1Q8WV19 159 aa11.96□□□□□ -0.49
UBE3B-210ENST00000539599 TMEM56Q96MV1 263 aa11.96□□□□□ -0.49
UBE3B-210ENST00000539599 HIST1H2AAQ96QV6 131 aa11.96□□□□□ -0.49
UBE3B-210ENST00000539599 COA4Q9NYJ1 87 aa11.96□□□□□ -0.49
UBE3B-210ENST00000539599 KLF2Q9Y5W3 355 aaPredicted RBP11.96□□□□□ -0.49
UBE3B-210ENST00000539599 KPTNQ9Y664 436 aa11.96□□□□□ -0.49
UBE3B-210ENST00000539599 ATP23Q9Y6H3 246 aa11.96□□□□□ -0.49
UBE3B-210ENST00000539599 TMEM56-RWDD3S4R434 201 aa11.96□□□□□ -0.49
UBE3B-210ENST00000539599 CHD3Q12873 2000 aaKnown RBP11.96□□□□□ -0.49
UBE3B-210ENST00000539599 KMT2EQ8IZD2 1858 aa11.96□□□□□ -0.5
UBE3B-210ENST00000539599 ICE1Q9Y2F5 2266 aa11.96□□□□□ -0.5
UBE3B-210ENST00000539599 ADAM5Q6NVV9 412 aa11.96□□□□□ -0.5
UBE3B-210ENST00000539599 SPSB3Q6PJ21 355 aa11.96□□□□□ -0.5
UBE3B-210ENST00000539599 STRADBQ9C0K7 418 aa11.96□□□□□ -0.5
UBE3B-210ENST00000539599 VSIRQ9H7M9 311 aa11.96□□□□□ -0.5
UBE3B-210ENST00000539599 FAM86C1Q9NVL1 165 aa11.96□□□□□ -0.5
UBE3B-210ENST00000539599 DLL3Q9NYJ7 618 aa11.96□□□□□ -0.5
UBE3B-210ENST00000539599 B4GALT7Q9UBV7 327 aa11.96□□□□□ -0.5
UBE3B-210ENST00000539599 H0YL77 283 aa11.95□□□□□ -0.5
UBE3B-210ENST00000539599 TUSC2O75896 110 aa11.95□□□□□ -0.5
UBE3B-210ENST00000539599 IGKV1-39P01597 117 aa11.95□□□□□ -0.5
UBE3B-210ENST00000539599 IGKV1D-39P04432 117 aa11.95□□□□□ -0.5
UBE3B-210ENST00000539599 GPR146Q96CH1 333 aa11.95□□□□□ -0.5
UBE3B-210ENST00000539599 RSG1Q9BU20 258 aa11.95□□□□□ -0.5
UBE3B-210ENST00000539599 LYRM2Q9NU23 88 aaPredicted RBP11.95□□□□□ -0.5
UBE3B-210ENST00000539599 SPRR3Q9UBC9 169 aa11.95□□□□□ -0.5
UBE3B-210ENST00000539599 SLC34A2O95436 690 aa11.95□□□□□ -0.5
UBE3B-210ENST00000539599 HEXAP06865 529 aa11.95□□□□□ -0.5
UBE3B-210ENST00000539599 SULT1A1P50225 295 aa11.95□□□□□ -0.5
UBE3B-210ENST00000539599 ZNF343Q6P1L6 599 aa11.95□□□□□ -0.5
UBE3B-210ENST00000539599 FAM58AQ8N1B3 248 aa11.95□□□□□ -0.5
UBE3B-210ENST00000539599 Q8NFD4 153 aa11.95□□□□□ -0.5
UBE3B-210ENST00000539599 RBMXL1Q96E39 390 aaKnown RBP11.95□□□□□ -0.5
UBE3B-210ENST00000539599 OR2J1Q9GZK6 312 aa11.95□□□□□ -0.5
UBE3B-210ENST00000539599 KCNJ16Q9NPI9 418 aa11.95□□□□□ -0.5
UBE3B-210ENST00000539599 BIN3Q9NQY0 253 aa11.95□□□□□ -0.5
UBE3B-210ENST00000539599 PLSCR2Q9NRY7 297 aa11.95□□□□□ -0.5
UBE3B-210ENST00000539599 FZR1Q9UM11 496 aa11.95□□□□□ -0.5
UBE3B-210ENST00000539599 ATMQ13315 3056 aa11.94□□□□□ -0.5
UBE3B-210ENST00000539599 CEP250Q9BV73 2442 aa11.94□□□□□ -0.5
UBE3B-210ENST00000539599 TNRC6AQ8NDV7 1962 aaKnown RBP11.94□□□□□ -0.5
UBE3B-210ENST00000539599 ANKRD30BLA7E2S9 258 aa11.94□□□□□ -0.5
UBE3B-210ENST00000539599 CDIPTO14735 213 aa11.94□□□□□ -0.5
UBE3B-210ENST00000539599 LYZL6O75951 148 aa11.94□□□□□ -0.5
UBE3B-210ENST00000539599 IGLV2-14P01704 120 aa11.94□□□□□ -0.5
UBE3B-210ENST00000539599 ACAA1P09110 424 aaPredicted RBP11.94□□□□□ -0.5
UBE3B-210ENST00000539599 APLNRP35414 380 aa11.94□□□□□ -0.5
UBE3B-210ENST00000539599 IDH3GP51553 393 aaPredicted RBP11.94□□□□□ -0.5
UBE3B-210ENST00000539599 LINC00205P59089 165 aa11.94□□□□□ -0.5
UBE3B-210ENST00000539599 PLP2Q04941 152 aa11.94□□□□□ -0.5
UBE3B-210ENST00000539599 CLN3Q13286 438 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms