RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 GNB3P16520 340 aa10.68□□□□□ -0.7
CCDC42-202ENST00000539522 FUT3P21217 361 aa10.68□□□□□ -0.7
CCDC42-202ENST00000539522 GABRR1P24046 479 aa10.68□□□□□ -0.7
CCDC42-202ENST00000539522 CHATP28329 748 aa10.68□□□□□ -0.7
CCDC42-202ENST00000539522 GLIPR1P48060 266 aa10.68□□□□□ -0.7
CCDC42-202ENST00000539522 PRB3Q04118 309 aaPredicted RBP10.68□□□□□ -0.7
CCDC42-202ENST00000539522 AESQ08117 197 aa10.68□□□□□ -0.7
CCDC42-202ENST00000539522 DYRK1AQ13627 763 aa10.68□□□□□ -0.7
CCDC42-202ENST00000539522 ATXN7L3Q14CW9 347 aaPredicted RBP10.68□□□□□ -0.7
CCDC42-202ENST00000539522 GRK1Q15835 563 aa10.68□□□□□ -0.7
CCDC42-202ENST00000539522 LRRC10Q5BKY1 277 aa10.68□□□□□ -0.7
CCDC42-202ENST00000539522 KLF17Q5JT82 389 aaPredicted RBP10.68□□□□□ -0.7
CCDC42-202ENST00000539522 PLAC9Q5JTB6 97 aa10.68□□□□□ -0.7
CCDC42-202ENST00000539522 UTF1Q5T230 341 aa10.68□□□□□ -0.7
CCDC42-202ENST00000539522 RSBN1Q5VWQ0 802 aaPredicted RBP10.68□□□□□ -0.7
CCDC42-202ENST00000539522 C5orf24Q7Z6I8 188 aa10.68□□□□□ -0.7
CCDC42-202ENST00000539522 GLCCI1Q86VQ1 547 aa10.68□□□□□ -0.7
CCDC42-202ENST00000539522 CHPT1Q8WUD6 406 aa10.68□□□□□ -0.7
CCDC42-202ENST00000539522 DEDD2Q8WXF8 326 aa10.68□□□□□ -0.7
CCDC42-202ENST00000539522 TRIM63Q969Q1 353 aa10.68□□□□□ -0.7
CCDC42-202ENST00000539522 ARHGAP5-AS1Q96IT6 56 aa10.68□□□□□ -0.7
CCDC42-202ENST00000539522 TBX15Q96SF7 602 aa10.68□□□□□ -0.7
CCDC42-202ENST00000539522 SULT4A1Q9BR01 284 aa10.68□□□□□ -0.7
CCDC42-202ENST00000539522 DPCDQ9BVM2 203 aaPredicted RBP10.68□□□□□ -0.7
CCDC42-202ENST00000539522 PECRQ9BY49 303 aa10.68□□□□□ -0.7
CCDC42-202ENST00000539522 YAE1D1Q9NRH1 226 aa10.68□□□□□ -0.7
CCDC42-202ENST00000539522 KLK11Q9UBX7 282 aa10.68□□□□□ -0.7
CCDC42-202ENST00000539522 ZNF107Q9UII5 783 aaPredicted RBP10.68□□□□□ -0.7
CCDC42-202ENST00000539522 KCNK7Q9Y2U2 307 aa10.68□□□□□ -0.7
CCDC42-202ENST00000539522 LINC00854A0A1B0GVQ3 168 aa10.67□□□□□ -0.7
CCDC42-202ENST00000539522 TMEM235A6NFC5 223 aa10.67□□□□□ -0.7
CCDC42-202ENST00000539522 GLAP06280 429 aa10.67□□□□□ -0.7
CCDC42-202ENST00000539522 PTHLHP12272 177 aa10.67□□□□□ -0.7
CCDC42-202ENST00000539522 CCL3L1P16619 93 aa10.67□□□□□ -0.7
CCDC42-202ENST00000539522 GDNFP39905 211 aa10.67□□□□□ -0.7
CCDC42-202ENST00000539522 CBX5P45973 191 aa10.67□□□□□ -0.7
CCDC42-202ENST00000539522 GNG2P59768 71 aa10.67□□□□□ -0.7
CCDC42-202ENST00000539522 PAX5Q02548 391 aa10.67□□□□□ -0.7
CCDC42-202ENST00000539522 CR1LQ2VPA4 569 aa10.67□□□□□ -0.7
CCDC42-202ENST00000539522 OLFML2AQ68BL7 652 aa10.67□□□□□ -0.7
CCDC42-202ENST00000539522 HCP5Q6MZN7 132 aa10.67□□□□□ -0.7
CCDC42-202ENST00000539522 GAPTQ8N292 157 aa10.67□□□□□ -0.7
CCDC42-202ENST00000539522 H1FXQ92522 213 aaKnown RBP10.67□□□□□ -0.7
CCDC42-202ENST00000539522 C7orf50Q9BRJ6 194 aaKnown RBP10.67□□□□□ -0.7
CCDC42-202ENST00000539522 ZMAT3Q9HA38 289 aaKnown RBP10.67□□□□□ -0.7
CCDC42-202ENST00000539522 SPACA1Q9HBV2 294 aa10.67□□□□□ -0.7
CCDC42-202ENST00000539522 TBC1D24Q9ULP9 559 aa10.67□□□□□ -0.7
CCDC42-202ENST00000539522 TRAV39A0A0B4J263 110 aa10.66□□□□□ -0.7
CCDC42-202ENST00000539522 ANKRD20A5PA0PJZ0 165 aa10.66□□□□□ -0.7
CCDC42-202ENST00000539522 VGLL3A8MV65 326 aa10.66□□□□□ -0.7
CCDC42-202ENST00000539522 A8MV72 311 aaPredicted RBP10.66□□□□□ -0.7
CCDC42-202ENST00000539522 MFNGO00587 321 aa10.66□□□□□ -0.7
CCDC42-202ENST00000539522 MGST3O14880 152 aa10.66□□□□□ -0.7
CCDC42-202ENST00000539522 GPR37O15354 613 aa10.66□□□□□ -0.7
CCDC42-202ENST00000539522 PDCD6O75340 191 aa10.66□□□□□ -0.7
CCDC42-202ENST00000539522 MMP23AO75900 390 aa10.66□□□□□ -0.7
CCDC42-202ENST00000539522 PTTG1O95997 202 aa10.66□□□□□ -0.7
CCDC42-202ENST00000539522 CSF1P09603 554 aa10.66□□□□□ -0.7
CCDC42-202ENST00000539522 PPIAL4GP0DN37 164 aa10.66□□□□□ -0.7
CCDC42-202ENST00000539522 ERP29P30040 261 aaKnown RBP10.66□□□□□ -0.7
CCDC42-202ENST00000539522 P2RX3P56373 397 aa10.66□□□□□ -0.7
CCDC42-202ENST00000539522 ACTBP60709 375 aa10.66□□□□□ -0.7
CCDC42-202ENST00000539522 ARF6P62330 175 aa10.66□□□□□ -0.7
CCDC42-202ENST00000539522 ACTG1P63261 375 aa10.66□□□□□ -0.7
CCDC42-202ENST00000539522 ARFRP1Q13795 201 aa10.66□□□□□ -0.7
CCDC42-202ENST00000539522 KLF9Q13886 244 aaPredicted RBP10.66□□□□□ -0.7
CCDC42-202ENST00000539522 EDDM3AQ14507 147 aa10.66□□□□□ -0.7
CCDC42-202ENST00000539522 OXA1LQ15070 435 aa10.66□□□□□ -0.7
CCDC42-202ENST00000539522 TRIM16LQ309B1 348 aa10.66□□□□□ -0.7
CCDC42-202ENST00000539522 C11orf91Q3C1V1 193 aa10.66□□□□□ -0.7
CCDC42-202ENST00000539522 PAN3Q58A45 887 aaKnown RBP10.66□□□□□ -0.7
CCDC42-202ENST00000539522 RNASE12Q5GAN4 147 aaKnown RBP10.66□□□□□ -0.7
CCDC42-202ENST00000539522 FAM120AOSQ5T036 256 aa10.66□□□□□ -0.7
CCDC42-202ENST00000539522 DCAF12L2Q5VW00 463 aa10.66□□□□□ -0.7
CCDC42-202ENST00000539522 FAHD2BQ6P2I3 314 aaPredicted RBP10.66□□□□□ -0.7
CCDC42-202ENST00000539522 GDPD3Q7L5L3 318 aa10.66□□□□□ -0.7
CCDC42-202ENST00000539522 C6orf201Q7Z4U5 140 aa10.66□□□□□ -0.7
CCDC42-202ENST00000539522 TNFRSF14Q92956 283 aa10.66□□□□□ -0.7
CCDC42-202ENST00000539522 FAHD2AQ96GK7 314 aa10.66□□□□□ -0.7
CCDC42-202ENST00000539522 OCSTAMPQ9BR26 566 aa10.66□□□□□ -0.7
CCDC42-202ENST00000539522 FAAP24Q9BTP7 215 aa10.66□□□□□ -0.7
CCDC42-202ENST00000539522 ELF5Q9UKW6 265 aaPredicted RBP10.66□□□□□ -0.7
CCDC42-202ENST00000539522 SOX21Q9Y651 276 aaPredicted RBP10.66□□□□□ -0.7
CCDC42-202ENST00000539522 KIAA2026Q5HYC2 2103 aa10.66□□□□□ -0.7
CCDC42-202ENST00000539522 TRBV23-1A0A0A0MS06 115 aa10.65□□□□□ -0.7
CCDC42-202ENST00000539522 NAP1L6A6NFF2 107 aa10.65□□□□□ -0.7
CCDC42-202ENST00000539522 LYRM1O43325 122 aa10.65□□□□□ -0.7
CCDC42-202ENST00000539522 ENSAO43768 121 aaKnown RBP10.65□□□□□ -0.7
CCDC42-202ENST00000539522 RPL31P62899 125 aaKnown RBP10.65□□□□□ -0.7
CCDC42-202ENST00000539522 GUCA2AQ02747 115 aa10.65□□□□□ -0.7
CCDC42-202ENST00000539522 C17orf58Q2M2W7 97 aa10.65□□□□□ -0.7
CCDC42-202ENST00000539522 TUSC1Q2TAM9 212 aa10.65□□□□□ -0.7
CCDC42-202ENST00000539522 NKAPLQ5M9Q1 402 aa10.65□□□□□ -0.7
CCDC42-202ENST00000539522 ATAD3CQ5T2N8 411 aa10.65□□□□□ -0.7
CCDC42-202ENST00000539522 CD276Q5ZPR3 534 aa10.65□□□□□ -0.7
CCDC42-202ENST00000539522 ZNF497Q6ZNH5 498 aa10.65□□□□□ -0.7
CCDC42-202ENST00000539522 TRAPPC6BQ86SZ2 158 aa10.65□□□□□ -0.7
CCDC42-202ENST00000539522 CENPSQ8N2Z9 138 aa10.65□□□□□ -0.7
CCDC42-202ENST00000539522 TMEM229BQ8NBD8 167 aa10.65□□□□□ -0.7
CCDC42-202ENST00000539522 OR13A1Q8NGR1 328 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms