RNA–Protein interactions for RNA: ENST00000538933.1

CLSTN3-208, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-208ENST00000538933 KIR2DS1A0A191URI9 304 aa10.23□□□□□ -0.77
CLSTN3-208ENST00000538933 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.23□□□□□ -0.77
CLSTN3-208ENST00000538933 GPR137BO60478 399 aa10.23□□□□□ -0.77
CLSTN3-208ENST00000538933 PDCD6O75340 191 aa10.23□□□□□ -0.77
CLSTN3-208ENST00000538933 RPS2P15880 293 aaKnown RBP10.23□□□□□ -0.77
CLSTN3-208ENST00000538933 PITPNAQ00169 270 aa10.23□□□□□ -0.77
CLSTN3-208ENST00000538933 ARFRP1Q13795 201 aa10.23□□□□□ -0.77
CLSTN3-208ENST00000538933 ESCO2Q56NI9 601 aa10.23□□□□□ -0.77
CLSTN3-208ENST00000538933 STUMQ69YW2 141 aa10.23□□□□□ -0.77
CLSTN3-208ENST00000538933 DCDC5Q6ZRR9 648 aa10.23□□□□□ -0.77
CLSTN3-208ENST00000538933 Q6ZSV7 163 aa10.23□□□□□ -0.77
CLSTN3-208ENST00000538933 NLRC3Q7RTR2 1065 aa10.23□□□□□ -0.77
CLSTN3-208ENST00000538933 ZNF561Q8N587 486 aa10.23□□□□□ -0.77
CLSTN3-208ENST00000538933 C15orf40Q8WUR7 153 aa10.23□□□□□ -0.77
CLSTN3-208ENST00000538933 S100ZQ8WXG8 99 aa10.23□□□□□ -0.77
CLSTN3-208ENST00000538933 MED30Q96HR3 178 aa10.23□□□□□ -0.77
CLSTN3-208ENST00000538933 ARHGAP5-AS1Q96IT6 56 aa10.23□□□□□ -0.77
CLSTN3-208ENST00000538933 TSC22D3Q99576 134 aa10.23□□□□□ -0.77
CLSTN3-208ENST00000538933 CCL13Q99616 98 aa10.23□□□□□ -0.77
CLSTN3-208ENST00000538933 DNTTIP1Q9H147 329 aa10.23□□□□□ -0.77
CLSTN3-208ENST00000538933 PPA2Q9H2U2 334 aa10.23□□□□□ -0.77
CLSTN3-208ENST00000538933 C16orf95Q9H693 158 aa10.23□□□□□ -0.77
CLSTN3-208ENST00000538933 AURKAIP1Q9NWT8 199 aaPredicted RBP10.23□□□□□ -0.77
CLSTN3-208ENST00000538933 RABL2AQ9UBK7 228 aaPredicted RBP10.23□□□□□ -0.77
CLSTN3-208ENST00000538933 RABL2BQ9UNT1 228 aa10.23□□□□□ -0.77
CLSTN3-208ENST00000538933 IGKV1D-17A0A075B6S4 117 aa10.22□□□□□ -0.77
CLSTN3-208ENST00000538933 UBE2QL1A1L167 161 aa10.22□□□□□ -0.77
CLSTN3-208ENST00000538933 RAB27BO00194 218 aa10.22□□□□□ -0.77
CLSTN3-208ENST00000538933 TNFRSF13BO14836 293 aaPredicted RBP10.22□□□□□ -0.77
CLSTN3-208ENST00000538933 XRCC3O43542 346 aa10.22□□□□□ -0.77
CLSTN3-208ENST00000538933 NDUFB3O43676 98 aa10.22□□□□□ -0.77
CLSTN3-208ENST00000538933 CD3GP09693 182 aa10.22□□□□□ -0.77
CLSTN3-208ENST00000538933 GNB3P16520 340 aa10.22□□□□□ -0.77
CLSTN3-208ENST00000538933 TAS2R20P59543 309 aa10.22□□□□□ -0.77
CLSTN3-208ENST00000538933 GNG2P59768 71 aa10.22□□□□□ -0.77
CLSTN3-208ENST00000538933 BPIFB3P59826 476 aa10.22□□□□□ -0.77
CLSTN3-208ENST00000538933 MOGAT2Q3SYC2 334 aa10.22□□□□□ -0.77
CLSTN3-208ENST00000538933 LRRC10Q5BKY1 277 aa10.22□□□□□ -0.77
CLSTN3-208ENST00000538933 Q6P435 159 aa10.22□□□□□ -0.77
CLSTN3-208ENST00000538933 LINC00299Q6ZSB3 139 aa10.22□□□□□ -0.77
CLSTN3-208ENST00000538933 GDPD3Q7L5L3 318 aa10.22□□□□□ -0.77
CLSTN3-208ENST00000538933 C6orf201Q7Z4U5 140 aa10.22□□□□□ -0.77
CLSTN3-208ENST00000538933 SNX29P2Q8IUI4 249 aa10.22□□□□□ -0.77
CLSTN3-208ENST00000538933 FAM89BQ8N5H3 189 aa10.22□□□□□ -0.77
CLSTN3-208ENST00000538933 CD177Q8N6Q3 437 aa10.22□□□□□ -0.77
CLSTN3-208ENST00000538933 SUMF2Q8NBJ7 301 aa10.22□□□□□ -0.77
CLSTN3-208ENST00000538933 OR8B3Q8NGG8 313 aa10.22□□□□□ -0.77
CLSTN3-208ENST00000538933 ANGPTL6Q8NI99 470 aa10.22□□□□□ -0.77
CLSTN3-208ENST00000538933 SNX22Q96L94 193 aa10.22□□□□□ -0.77
CLSTN3-208ENST00000538933 OR8B2Q96RD0 313 aa10.22□□□□□ -0.77
CLSTN3-208ENST00000538933 NUDT16L1Q9BRJ7 211 aaKnown RBP10.22□□□□□ -0.77
CLSTN3-208ENST00000538933 TMEM246Q9BRR3 403 aa10.22□□□□□ -0.77
CLSTN3-208ENST00000538933 DPCDQ9BVM2 203 aaPredicted RBP10.22□□□□□ -0.77
CLSTN3-208ENST00000538933 PECRQ9BY49 303 aa10.22□□□□□ -0.77
CLSTN3-208ENST00000538933 KRTAP17-1Q9BYP8 105 aa10.22□□□□□ -0.77
CLSTN3-208ENST00000538933 CHST6Q9GZX3 395 aa10.22□□□□□ -0.77
CLSTN3-208ENST00000538933 TMEM165Q9HC07 324 aa10.22□□□□□ -0.77
CLSTN3-208ENST00000538933 CHMP1AQ9HD42 196 aaPredicted RBP10.22□□□□□ -0.77
CLSTN3-208ENST00000538933 NECAP2Q9NVZ3 263 aa10.22□□□□□ -0.77
CLSTN3-208ENST00000538933 ING3Q9NXR8 418 aa10.22□□□□□ -0.77
CLSTN3-208ENST00000538933 MIOXQ9UGB7 285 aa10.22□□□□□ -0.77
CLSTN3-208ENST00000538933 KIAA2026Q5HYC2 2103 aa10.22□□□□□ -0.77
CLSTN3-208ENST00000538933 A0A0A6YYD4 124 aa10.21□□□□□ -0.77
CLSTN3-208ENST00000538933 FUOMA2VDF0 154 aa10.21□□□□□ -0.77
CLSTN3-208ENST00000538933 CEACAM18A8MTB9 384 aa10.21□□□□□ -0.77
CLSTN3-208ENST00000538933 SLC33A1O00400 549 aaPredicted RBP10.21□□□□□ -0.77
CLSTN3-208ENST00000538933 FSTL3O95633 263 aa10.21□□□□□ -0.77
CLSTN3-208ENST00000538933 TFF1P04155 84 aa10.21□□□□□ -0.77
CLSTN3-208ENST00000538933 GSTP1P09211 210 aaKnown RBP10.21□□□□□ -0.77
CLSTN3-208ENST00000538933 HIST1H1DP16402 221 aaKnown RBP10.21□□□□□ -0.77
CLSTN3-208ENST00000538933 NDUFB7P17568 137 aa10.21□□□□□ -0.77
CLSTN3-208ENST00000538933 CHATP28329 748 aa10.21□□□□□ -0.77
CLSTN3-208ENST00000538933 EDDM3AQ14507 147 aa10.21□□□□□ -0.77
CLSTN3-208ENST00000538933 ATXN7L3Q14CW9 347 aaPredicted RBP10.21□□□□□ -0.77
CLSTN3-208ENST00000538933 GRK1Q15835 563 aa10.21□□□□□ -0.77
CLSTN3-208ENST00000538933 CDNFQ49AH0 187 aa10.21□□□□□ -0.77
CLSTN3-208ENST00000538933 PYDC2Q56P42 97 aa10.21□□□□□ -0.77
CLSTN3-208ENST00000538933 OXLD1Q5BKU9 147 aa10.21□□□□□ -0.77
CLSTN3-208ENST00000538933 PYHIN1Q6K0P9 492 aa10.21□□□□□ -0.77
CLSTN3-208ENST00000538933 BTNL3Q6UXE8 466 aa10.21□□□□□ -0.77
CLSTN3-208ENST00000538933 CCBE1Q6UXH8 406 aaPredicted RBP10.21□□□□□ -0.77
CLSTN3-208ENST00000538933 ZNF788Q6ZQV5 615 aa10.21□□□□□ -0.77
CLSTN3-208ENST00000538933 FAM216BQ8N7L0 139 aa10.21□□□□□ -0.77
CLSTN3-208ENST00000538933 OR5D13Q8NGL4 314 aa10.21□□□□□ -0.77
CLSTN3-208ENST00000538933 SSMEM1Q8WWF3 244 aa10.21□□□□□ -0.77
CLSTN3-208ENST00000538933 NEIL1Q96FI4 390 aaPredicted RBP10.21□□□□□ -0.77
CLSTN3-208ENST00000538933 GAFA1Q96PS6 74 aa10.21□□□□□ -0.77
CLSTN3-208ENST00000538933 CMSS1Q9BQ75 279 aaKnown RBP10.21□□□□□ -0.77
CLSTN3-208ENST00000538933 SSBP3Q9BWW4 388 aaPredicted RBP10.21□□□□□ -0.77
CLSTN3-208ENST00000538933 ETAA1Q9NY74 926 aa10.21□□□□□ -0.77
CLSTN3-208ENST00000538933 HSF4Q9ULV5 492 aa10.21□□□□□ -0.77
CLSTN3-208ENST00000538933 SERPINE3A8MV23 424 aa10.2□□□□□ -0.78
CLSTN3-208ENST00000538933 GPR37O15354 613 aa10.2□□□□□ -0.78
CLSTN3-208ENST00000538933 SIGLEC5O15389 551 aa10.2□□□□□ -0.78
CLSTN3-208ENST00000538933 IGHV4-59P01825 116 aa10.2□□□□□ -0.78
CLSTN3-208ENST00000538933 GLAP06280 429 aa10.2□□□□□ -0.78
CLSTN3-208ENST00000538933 PRSS3P35030 304 aa10.2□□□□□ -0.78
CLSTN3-208ENST00000538933 KCNJ3P48549 501 aa10.2□□□□□ -0.78
CLSTN3-208ENST00000538933 EDDM3BP56851 147 aa10.2□□□□□ -0.78
CLSTN3-208ENST00000538933 ZNF45Q02386 682 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms