RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 PLGLB1Q02325 96 aa13.67□□□□□ -0.22
CHMP1A-202ENST00000535997 ZNF324BQ6AW86 544 aaPredicted RBP13.67□□□□□ -0.22
CHMP1A-202ENST00000535997 ZNF880Q6PDB4 577 aa13.67□□□□□ -0.22
CHMP1A-202ENST00000535997 ZNF561Q8N587 486 aa13.67□□□□□ -0.22
CHMP1A-202ENST00000535997 PLPPR1Q8TBJ4 325 aa13.67□□□□□ -0.22
CHMP1A-202ENST00000535997 IFT22Q9H7X7 185 aa13.67□□□□□ -0.22
CHMP1A-202ENST00000535997 RNF115Q9Y4L5 304 aa13.67□□□□□ -0.22
CHMP1A-202ENST00000535997 FAM186AA6NE01 2351 aa13.67□□□□□ -0.22
CHMP1A-202ENST00000535997 WDFY4Q6ZS81 3184 aa13.67□□□□□ -0.22
CHMP1A-202ENST00000535997 KMT2EQ8IZD2 1858 aa13.67□□□□□ -0.22
CHMP1A-202ENST00000535997 TMEM50AO95807 157 aa13.67□□□□□ -0.22
CHMP1A-202ENST00000535997 SLC25A6P12236 298 aa13.67□□□□□ -0.22
CHMP1A-202ENST00000535997 CLN3Q13286 438 aa13.67□□□□□ -0.22
CHMP1A-202ENST00000535997 LINC00696Q6ZRV3 163 aa13.67□□□□□ -0.22
CHMP1A-202ENST00000535997 NUFIP2Q7Z417 695 aaKnown RBP13.67□□□□□ -0.22
CHMP1A-202ENST00000535997 PKIBQ9C010 78 aa13.67□□□□□ -0.22
CHMP1A-202ENST00000535997 GLRX2Q9NS18 164 aa13.67□□□□□ -0.22
CHMP1A-202ENST00000535997 DOCK7Q96N67 2140 aa13.67□□□□□ -0.22
CHMP1A-202ENST00000535997 WRBO00258 174 aa13.66□□□□□ -0.22
CHMP1A-202ENST00000535997 DYNLT3P51808 116 aa13.66□□□□□ -0.22
CHMP1A-202ENST00000535997 OR8G1Q15617 311 aa13.66□□□□□ -0.22
CHMP1A-202ENST00000535997 SOHLH1Q5JUK2 328 aa13.66□□□□□ -0.22
CHMP1A-202ENST00000535997 ODF3L1Q8IXM7 274 aa13.66□□□□□ -0.22
CHMP1A-202ENST00000535997 CD300LFQ8TDQ1 290 aa13.66□□□□□ -0.22
CHMP1A-202ENST00000535997 RDH5Q92781 318 aa13.66□□□□□ -0.22
CHMP1A-202ENST00000535997 C12orf57Q99622 126 aa13.66□□□□□ -0.22
CHMP1A-202ENST00000535997 HIPK2Q9H2X6 1198 aa13.66□□□□□ -0.22
CHMP1A-202ENST00000535997 A0A1B0GU03 582 aa13.66□□□□□ -0.22
CHMP1A-202ENST00000535997 MED19A0JLT2 244 aaPredicted RBP13.66□□□□□ -0.22
CHMP1A-202ENST00000535997 RBFOX3A6NFN3 312 aa13.66□□□□□ -0.22
CHMP1A-202ENST00000535997 PCP4L1A6NKN8 68 aa13.66□□□□□ -0.22
CHMP1A-202ENST00000535997 CST7O76096 145 aa13.66□□□□□ -0.22
CHMP1A-202ENST00000535997 WNT2P09544 360 aa13.66□□□□□ -0.22
CHMP1A-202ENST00000535997 CEACAM1P13688 526 aa13.66□□□□□ -0.22
CHMP1A-202ENST00000535997 WNT5AP41221 380 aa13.66□□□□□ -0.22
CHMP1A-202ENST00000535997 H1FOOQ8IZA3 346 aaPredicted RBP13.66□□□□□ -0.22
CHMP1A-202ENST00000535997 ZFP62Q8NB50 900 aaPredicted RBP13.66□□□□□ -0.22
CHMP1A-202ENST00000535997 ZNF488Q96MN9 340 aa13.66□□□□□ -0.22
CHMP1A-202ENST00000535997 GUCD1Q96NT3 240 aa13.66□□□□□ -0.22
CHMP1A-202ENST00000535997 OR51I2Q9H344 312 aa13.66□□□□□ -0.22
CHMP1A-202ENST00000535997 UNKLQ9H9P5 680 aaKnown RBP13.66□□□□□ -0.22
CHMP1A-202ENST00000535997 COLQQ9Y215 455 aaPredicted RBP13.66□□□□□ -0.22
CHMP1A-202ENST00000535997 KLRC4-KLRK1H3BQV0 150 aa13.65□□□□□ -0.22
CHMP1A-202ENST00000535997 LILRA1O75019 489 aa13.65□□□□□ -0.22
CHMP1A-202ENST00000535997 SP1P08047 785 aa13.65□□□□□ -0.22
CHMP1A-202ENST00000535997 AGAP20933 346 aa13.65□□□□□ -0.22
CHMP1A-202ENST00000535997 MPLP40238 635 aa13.65□□□□□ -0.22
CHMP1A-202ENST00000535997 SPSB3Q6PJ21 355 aa13.65□□□□□ -0.22
CHMP1A-202ENST00000535997 RARRES2Q99969 163 aa13.65□□□□□ -0.22
CHMP1A-202ENST00000535997 C20orf24Q9BUV8 137 aa13.65□□□□□ -0.22
CHMP1A-202ENST00000535997 DLL3Q9NYJ7 618 aa13.65□□□□□ -0.22
CHMP1A-202ENST00000535997 TAAR3PQ9P1P4 343 aa13.65□□□□□ -0.22
CHMP1A-202ENST00000535997 ERRFI1Q9UJM3 462 aaPredicted RBP13.65□□□□□ -0.22
CHMP1A-202ENST00000535997 DEGS1O15121 323 aa13.65□□□□□ -0.22
CHMP1A-202ENST00000535997 GPR37O15354 613 aa13.65□□□□□ -0.22
CHMP1A-202ENST00000535997 TNFSF12O43508 249 aa13.65□□□□□ -0.22
CHMP1A-202ENST00000535997 SERPINE2P07093 398 aa13.65□□□□□ -0.22
CHMP1A-202ENST00000535997 OR13C7P0DN81 318 aa13.65□□□□□ -0.22
CHMP1A-202ENST00000535997 PAX9P55771 341 aa13.65□□□□□ -0.22
CHMP1A-202ENST00000535997 CCL20P78556 96 aa13.65□□□□□ -0.22
CHMP1A-202ENST00000535997 HLA-DRB3P79483 266 aa13.65□□□□□ -0.22
CHMP1A-202ENST00000535997 SLC10A1Q14973 349 aa13.65□□□□□ -0.22
CHMP1A-202ENST00000535997 SP5Q6BEB4 398 aaPredicted RBP13.65□□□□□ -0.22
CHMP1A-202ENST00000535997 TMEM217Q8N7C4 229 aa13.65□□□□□ -0.22
CHMP1A-202ENST00000535997 CABLES2Q9BTV7 478 aa13.65□□□□□ -0.22
CHMP1A-202ENST00000535997 ARRDC1-AS1Q9H2J1 176 aa13.65□□□□□ -0.22
CHMP1A-202ENST00000535997 TREM2Q9NZC2 230 aa13.65□□□□□ -0.22
CHMP1A-202ENST00000535997 KIAA1456Q9P272 454 aa13.65□□□□□ -0.22
CHMP1A-202ENST00000535997 KLF13Q9Y2Y9 288 aaPredicted RBP13.65□□□□□ -0.22
CHMP1A-202ENST00000535997 RFNGQ9Y644 331 aa13.65□□□□□ -0.22
CHMP1A-202ENST00000535997 A0A1B0GV50 99 aa13.64□□□□□ -0.23
CHMP1A-202ENST00000535997 A0A1W2PNU3 283 aaPredicted RBP13.64□□□□□ -0.23
CHMP1A-202ENST00000535997 LRP5LA4QPB2 252 aa13.64□□□□□ -0.23
CHMP1A-202ENST00000535997 NPIPB11E5RHQ5 1161 aa13.64□□□□□ -0.23
CHMP1A-202ENST00000535997 SULT1A1P50225 295 aa13.64□□□□□ -0.23
CHMP1A-202ENST00000535997 SNRPEP62304 92 aaKnown RBP13.64□□□□□ -0.23
CHMP1A-202ENST00000535997 OR1K1Q8NGR3 316 aa13.64□□□□□ -0.23
CHMP1A-202ENST00000535997 ABHD14AQ9BUJ0 271 aa13.64□□□□□ -0.23
CHMP1A-202ENST00000535997 MED13Q9UHV7 2174 aa13.64□□□□□ -0.23
CHMP1A-202ENST00000535997 C5orf52A6NGY3 159 aa13.64□□□□□ -0.23
CHMP1A-202ENST00000535997 IL18BPO95998 194 aa13.64□□□□□ -0.23
CHMP1A-202ENST00000535997 DAOP14920 347 aa13.64□□□□□ -0.23
CHMP1A-202ENST00000535997 CA6P23280 308 aa13.64□□□□□ -0.23
CHMP1A-202ENST00000535997 MEOX1P50221 254 aa13.64□□□□□ -0.23
CHMP1A-202ENST00000535997 MEOX2P50222 304 aa13.64□□□□□ -0.23
CHMP1A-202ENST00000535997 HIKESHIQ53FT3 197 aa13.64□□□□□ -0.23
CHMP1A-202ENST00000535997 FBXW9Q5XUX1 488 aa13.64□□□□□ -0.23
CHMP1A-202ENST00000535997 OR2T2Q6IF00 324 aa13.64□□□□□ -0.23
CHMP1A-202ENST00000535997 DPPA3Q6W0C5 159 aa13.64□□□□□ -0.23
CHMP1A-202ENST00000535997 STX12Q86Y82 276 aa13.64□□□□□ -0.23
CHMP1A-202ENST00000535997 NANOS1Q8WY41 292 aaKnown RBP13.64□□□□□ -0.23
CHMP1A-202ENST00000535997 BCL2L2Q92843 193 aaPredicted RBP13.64□□□□□ -0.23
CHMP1A-202ENST00000535997 ISOC2Q96AB3 205 aa13.64□□□□□ -0.23
CHMP1A-202ENST00000535997 RAB40CQ96S21 281 aa13.64□□□□□ -0.23
CHMP1A-202ENST00000535997 ATP5SQ99766 215 aa13.64□□□□□ -0.23
CHMP1A-202ENST00000535997 PRSS50Q9UI38 385 aa13.64□□□□□ -0.23
CHMP1A-202ENST00000535997 CELSR3Q9NYQ7 3312 aa13.63□□□□□ -0.23
CHMP1A-202ENST00000535997 CDRT15L2A8MXV6 281 aa13.63□□□□□ -0.23
CHMP1A-202ENST00000535997 J3QT63 122 aa13.63□□□□□ -0.23
CHMP1A-202ENST00000535997 DFFBO76075 338 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms