RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 OR5H8P0DN80 308 aa8.78□□□□□ -1
CLSTN3-206ENST00000535668 TMEM225BP0DP42 221 aa8.78□□□□□ -1
CLSTN3-206ENST00000535668 RAB40BQ12829 278 aa8.78□□□□□ -1
CLSTN3-206ENST00000535668 KIAA0141Q14154 515 aaPredicted RBP8.78□□□□□ -1
CLSTN3-206ENST00000535668 MPV17LQ2QL34 196 aa8.78□□□□□ -1
CLSTN3-206ENST00000535668 LY6G6FQ5SQ64 297 aa8.78□□□□□ -1
CLSTN3-206ENST00000535668 SLC25A48Q6ZT89 311 aaKnown RBP8.78□□□□□ -1
CLSTN3-206ENST00000535668 C18orf65Q6ZTR6 163 aa8.78□□□□□ -1
CLSTN3-206ENST00000535668 AMIGO2Q86SJ2 522 aa8.78□□□□□ -1
CLSTN3-206ENST00000535668 ZNF439Q8NDP4 499 aa8.78□□□□□ -1
CLSTN3-206ENST00000535668 KLHL30-AS1Q8NEE0 82 aa8.78□□□□□ -1
CLSTN3-206ENST00000535668 OR5D18Q8NGL1 313 aa8.78□□□□□ -1
CLSTN3-206ENST00000535668 OR5M8Q8NGP6 311 aa8.78□□□□□ -1
CLSTN3-206ENST00000535668 RHOXF1Q8NHV9 184 aa8.78□□□□□ -1
CLSTN3-206ENST00000535668 PLPPR1Q8TBJ4 325 aa8.78□□□□□ -1
CLSTN3-206ENST00000535668 C4orf3Q8WVX3 66 aa8.78□□□□□ -1
CLSTN3-206ENST00000535668 LGALS12Q96DT0 336 aa8.78□□□□□ -1
CLSTN3-206ENST00000535668 C4orf36Q96KX1 117 aa8.78□□□□□ -1
CLSTN3-206ENST00000535668 SPACA5Q96QH8 159 aa8.78□□□□□ -1
CLSTN3-206ENST00000535668 RCC2Q9P258 522 aaKnown RBP8.78□□□□□ -1
CLSTN3-206ENST00000535668 FAM172BPA6NC97 362 aa8.77□□□□□ -1.01
CLSTN3-206ENST00000535668 FAM90A10PA6NDY2 464 aa8.77□□□□□ -1.01
CLSTN3-206ENST00000535668 LINC01548A6NM66 108 aa8.77□□□□□ -1.01
CLSTN3-206ENST00000535668 H3BSH0 61 aa8.77□□□□□ -1.01
CLSTN3-206ENST00000535668 GABRPO00591 440 aa8.77□□□□□ -1.01
CLSTN3-206ENST00000535668 CA11O75493 328 aa8.77□□□□□ -1.01
CLSTN3-206ENST00000535668 FADS2O95864 444 aaKnown RBP8.77□□□□□ -1.01
CLSTN3-206ENST00000535668 GLAP06280 429 aa8.77□□□□□ -1.01
CLSTN3-206ENST00000535668 OCM2P0CE71 109 aa8.77□□□□□ -1.01
CLSTN3-206ENST00000535668 OCMP0CE72 109 aaPredicted RBP8.77□□□□□ -1.01
CLSTN3-206ENST00000535668 CALCBP10092 127 aa8.77□□□□□ -1.01
CLSTN3-206ENST00000535668 RAB3AP20336 220 aa8.77□□□□□ -1.01
CLSTN3-206ENST00000535668 NFYBP25208 207 aa8.77□□□□□ -1.01
CLSTN3-206ENST00000535668 PPIFP30405 207 aaKnown RBP8.77□□□□□ -1.01
CLSTN3-206ENST00000535668 GLP1RP43220 463 aa8.77□□□□□ -1.01
CLSTN3-206ENST00000535668 GPR50Q13585 617 aa8.77□□□□□ -1.01
CLSTN3-206ENST00000535668 RBM39Q14498 530 aaKnown RBP8.77□□□□□ -1.01
CLSTN3-206ENST00000535668 CXorf66Q5JRM2 361 aaPredicted RBP8.77□□□□□ -1.01
CLSTN3-206ENST00000535668 C9orf152Q5JTZ5 239 aa8.77□□□□□ -1.01
CLSTN3-206ENST00000535668 C1orf146Q5VVC0 180 aa8.77□□□□□ -1.01
CLSTN3-206ENST00000535668 ZNF497Q6ZNH5 498 aa8.77□□□□□ -1.01
CLSTN3-206ENST00000535668 OR10X1Q8NGY0 326 aa8.77□□□□□ -1.01
CLSTN3-206ENST00000535668 OR5AK2Q8NH90 309 aa8.77□□□□□ -1.01
CLSTN3-206ENST00000535668 RTN4IP1Q8WWV3 396 aaPredicted RBP8.77□□□□□ -1.01
CLSTN3-206ENST00000535668 RFT1Q96AA3 541 aa8.77□□□□□ -1.01
CLSTN3-206ENST00000535668 MRPS24Q96EL2 167 aaKnown RBP8.77□□□□□ -1.01
CLSTN3-206ENST00000535668 UBE2E2Q96LR5 201 aa8.77□□□□□ -1.01
CLSTN3-206ENST00000535668 S1PR3Q99500 378 aa8.77□□□□□ -1.01
CLSTN3-206ENST00000535668 ALG8Q9BVK2 526 aa8.77□□□□□ -1.01
CLSTN3-206ENST00000535668 DPCDQ9BVM2 203 aaPredicted RBP8.77□□□□□ -1.01
CLSTN3-206ENST00000535668 PAK1IP1Q9NWT1 392 aaPredicted RBP8.77□□□□□ -1.01
CLSTN3-206ENST00000535668 IMPAD1Q9NX62 359 aa8.77□□□□□ -1.01
CLSTN3-206ENST00000535668 ERVK13-1Q9NX77 482 aa8.77□□□□□ -1.01
CLSTN3-206ENST00000535668 GFOD1Q9NXC2 390 aa8.77□□□□□ -1.01
CLSTN3-206ENST00000535668 DNAH1Q9P2D7 4330 aa8.76□□□□□ -1.01
CLSTN3-206ENST00000535668 J3QLW9 94 aa8.76□□□□□ -1.01
CLSTN3-206ENST00000535668 SC5DO75845 299 aa8.76□□□□□ -1.01
CLSTN3-206ENST00000535668 MOSP00540 346 aa8.76□□□□□ -1.01
CLSTN3-206ENST00000535668 IGLV1-40P01703 118 aa8.76□□□□□ -1.01
CLSTN3-206ENST00000535668 MT-ND4P03905 459 aa8.76□□□□□ -1.01
CLSTN3-206ENST00000535668 RPLP1P05386 114 aaKnown RBP8.76□□□□□ -1.01
CLSTN3-206ENST00000535668 ZNF19P17023 458 aa8.76□□□□□ -1.01
CLSTN3-206ENST00000535668 SSTR5P35346 364 aa8.76□□□□□ -1.01
CLSTN3-206ENST00000535668 ALDH3A2P51648 485 aa8.76□□□□□ -1.01
CLSTN3-206ENST00000535668 CRIP2P52943 208 aaPredicted RBP8.76□□□□□ -1.01
CLSTN3-206ENST00000535668 SNU13P55769 128 aaKnown RBP8.76□□□□□ -1.01
CLSTN3-206ENST00000535668 RBM11P57052 281 aaKnown RBP8.76□□□□□ -1.01
CLSTN3-206ENST00000535668 SCN1BQ07699 218 aa8.76□□□□□ -1.01
CLSTN3-206ENST00000535668 KHDC1LQ5JSQ8 128 aa8.76□□□□□ -1.01
CLSTN3-206ENST00000535668 CDH26Q8IXH8 852 aa8.76□□□□□ -1.01
CLSTN3-206ENST00000535668 SUMF2Q8NBJ7 301 aa8.76□□□□□ -1.01
CLSTN3-206ENST00000535668 MRGPRDQ8TDS7 321 aa8.76□□□□□ -1.01
CLSTN3-206ENST00000535668 RGP1Q92546 391 aaPredicted RBP8.76□□□□□ -1.01
CLSTN3-206ENST00000535668 Q96MT0 163 aa8.76□□□□□ -1.01
CLSTN3-206ENST00000535668 SPACA1Q9HBV2 294 aa8.76□□□□□ -1.01
CLSTN3-206ENST00000535668 RAB9BQ9NP90 201 aa8.76□□□□□ -1.01
CLSTN3-206ENST00000535668 TMEM138Q9NPI0 162 aa8.76□□□□□ -1.01
CLSTN3-206ENST00000535668 C8orf4Q9NR00 106 aa8.76□□□□□ -1.01
CLSTN3-206ENST00000535668 DHDHQ9UQ10 334 aa8.76□□□□□ -1.01
CLSTN3-206ENST00000535668 ST3GAL6Q9Y274 331 aa8.76□□□□□ -1.01
CLSTN3-206ENST00000535668 SACSQ9NZJ4 4579 aa8.75□□□□□ -1.01
CLSTN3-206ENST00000535668 TMEM30CPA0ZSE6 113 aa8.75□□□□□ -1.01
CLSTN3-206ENST00000535668 FAM90A7PA6NKC0 464 aa8.75□□□□□ -1.01
CLSTN3-206ENST00000535668 NUDT19A8MXV4 375 aa8.75□□□□□ -1.01
CLSTN3-206ENST00000535668 FAM90A23PA8MXZ1 464 aa8.75□□□□□ -1.01
CLSTN3-206ENST00000535668 E9PI62 339 aa8.75□□□□□ -1.01
CLSTN3-206ENST00000535668 I3L521 148 aa8.75□□□□□ -1.01
CLSTN3-206ENST00000535668 LANCL1O43813 399 aa8.75□□□□□ -1.01
CLSTN3-206ENST00000535668 CD2P06729 351 aa8.75□□□□□ -1.01
CLSTN3-206ENST00000535668 HCKP08631 526 aa8.75□□□□□ -1.01
CLSTN3-206ENST00000535668 LIMS3P0CW19 117 aa8.75□□□□□ -1.01
CLSTN3-206ENST00000535668 LIMS4P0CW20 117 aa8.75□□□□□ -1.01
CLSTN3-206ENST00000535668 GTF2A1P52655 376 aaPredicted RBP8.75□□□□□ -1.01
CLSTN3-206ENST00000535668 HES1Q14469 280 aa8.75□□□□□ -1.01
CLSTN3-206ENST00000535668 RSU1Q15404 277 aa8.75□□□□□ -1.01
CLSTN3-206ENST00000535668 PIGYQ3MUY2 71 aa8.75□□□□□ -1.01
CLSTN3-206ENST00000535668 LPCAT4Q643R3 524 aa8.75□□□□□ -1.01
CLSTN3-206ENST00000535668 RPL22L1Q6P5R6 122 aaKnown RBP8.75□□□□□ -1.01
CLSTN3-206ENST00000535668 TRAT1Q6PIZ9 186 aa8.75□□□□□ -1.01
CLSTN3-206ENST00000535668 LYPD6Q86Y78 171 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms