RNA–Protein interactions for RNA: ENST00000534375.1

PICALM-222, Transcript of phosphatidylinositol binding clathrin assembly protein, human

TSL 2

Gene PICALM, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PICALM-222	ENST00000534375	ATP5G1	P05496	136 aa		2.56	□□□□□ -2
PICALM-222	ENST00000534375	SNRPA	P09012	282 aa	Known RBP	2.56	□□□□□ -2
PICALM-222	ENST00000534375	KRTAP1-4	P0C5Y4	121 aa		2.56	□□□□□ -2
PICALM-222	ENST00000534375	CBX5	P45973	191 aa		2.56	□□□□□ -2
PICALM-222	ENST00000534375	CXCR4	P61073	352 aa		2.56	□□□□□ -2
PICALM-222	ENST00000534375	CCL7	P80098	99 aa		2.56	□□□□□ -2
PICALM-222	ENST00000534375	ATP5G2	Q06055	141 aa		2.56	□□□□□ -2
PICALM-222	ENST00000534375	TMEM176B	Q3YBM2	270 aa	Predicted RBP	2.56	□□□□□ -2
PICALM-222	ENST00000534375	C1orf195	Q5TG92	126 aa		2.56	□□□□□ -2
PICALM-222	ENST00000534375	DOLPP1	Q86YN1	238 aa		2.56	□□□□□ -2
PICALM-222	ENST00000534375	TRAPPC5	Q8IUR0	188 aa		2.56	□□□□□ -2
PICALM-222	ENST00000534375	TMEM161B	Q8NDZ6	487 aa		2.56	□□□□□ -2
PICALM-222	ENST00000534375	EEF1AKMT1	Q8WVE0	214 aa		2.56	□□□□□ -2
PICALM-222	ENST00000534375	TNFAIP8L1	Q8WVP5	186 aa		2.56	□□□□□ -2
PICALM-222	ENST00000534375	SLC25A46	Q96AG3	418 aa		2.56	□□□□□ -2
PICALM-222	ENST00000534375	ZIM3	Q96PE6	472 aa		2.56	□□□□□ -2
PICALM-222	ENST00000534375	TIPIN	Q9BVW5	301 aa		2.56	□□□□□ -2
PICALM-222	ENST00000534375	OR51I1	Q9H343	314 aa		2.56	□□□□□ -2
PICALM-222	ENST00000534375	ZNF430	Q9H8G1	570 aa	Predicted RBP	2.56	□□□□□ -2
PICALM-222	ENST00000534375	PARVA	Q9NVD7	372 aa		2.56	□□□□□ -2
PICALM-222	ENST00000534375	TAC3	Q9UHF0	121 aa		2.56	□□□□□ -2
PICALM-222	ENST00000534375	ZNF223	Q9UK11	482 aa	Predicted RBP	2.56	□□□□□ -2
PICALM-222	ENST00000534375		A0A1W2PP64	1363 aa		2.56	□□□□□ -2
PICALM-222	ENST00000534375	ATRN	O75882	1429 aa		2.56	□□□□□ -2
PICALM-222	ENST00000534375	NOS1	P29475	1434 aa		2.56	□□□□□ -2
PICALM-222	ENST00000534375	BRWD3	Q6RI45	1802 aa		2.56	□□□□□ -2
PICALM-222	ENST00000534375	THADA	Q6YHU6	1953 aa		2.56	□□□□□ -2
PICALM-222	ENST00000534375	CHD5	Q8TDI0	1954 aa		2.56	□□□□□ -2
PICALM-222	ENST00000534375		K7EPK0	472 aa		2.55	□□□□□ -2
PICALM-222	ENST00000534375	DCTN3	O75935	186 aa		2.55	□□□□□ -2
PICALM-222	ENST00000534375	LINC00869	P0C866	280 aa		2.55	□□□□□ -2
PICALM-222	ENST00000534375	SCGB1C2	P0DMR2	95 aa		2.55	□□□□□ -2
PICALM-222	ENST00000534375	C1GALT1C1L	P0DN25	315 aa		2.55	□□□□□ -2
PICALM-222	ENST00000534375	MDK	P21741	143 aa	Predicted RBP	2.55	□□□□□ -2
PICALM-222	ENST00000534375	ELK4	P28324	431 aa		2.55	□□□□□ -2
PICALM-222	ENST00000534375	SLC6A1	P30531	599 aa		2.55	□□□□□ -2
PICALM-222	ENST00000534375	SULT1A2	P50226	295 aa		2.55	□□□□□ -2
PICALM-222	ENST00000534375	HPCA	P84074	193 aa		2.55	□□□□□ -2
PICALM-222	ENST00000534375	PAFAH1B3	Q15102	231 aa	Known RBP	2.55	□□□□□ -2
PICALM-222	ENST00000534375	PDK2	Q15119	407 aa		2.55	□□□□□ -2
PICALM-222	ENST00000534375	KLHL12	Q53G59	568 aa		2.55	□□□□□ -2
PICALM-222	ENST00000534375	SNAPC4	Q5SXM2	1469 aa		2.55	□□□□□ -2
PICALM-222	ENST00000534375	MRPL2	Q5T653	305 aa	Known RBP	2.55	□□□□□ -2
PICALM-222	ENST00000534375	HENMT1	Q5T8I9	393 aa	Known RBP	2.55	□□□□□ -2
PICALM-222	ENST00000534375	TMEM215	Q68D42	235 aa		2.55	□□□□□ -2
PICALM-222	ENST00000534375	LAIR2	Q6ISS4	152 aa		2.55	□□□□□ -2
PICALM-222	ENST00000534375	SFXN4	Q6P4A7	337 aa		2.55	□□□□□ -2
PICALM-222	ENST00000534375		Q6ZRU5	148 aa		2.55	□□□□□ -2
PICALM-222	ENST00000534375	DPPA2	Q7Z7J5	298 aa		2.55	□□□□□ -2
PICALM-222	ENST00000534375	GID4	Q8IVV7	300 aa		2.55	□□□□□ -2
PICALM-222	ENST00000534375	MKX	Q8IYA7	352 aa		2.55	□□□□□ -2
PICALM-222	ENST00000534375	COL27A1	Q8IZC6	1860 aa	Predicted RBP	2.55	□□□□□ -2
PICALM-222	ENST00000534375	STK40	Q8N2I9	435 aa		2.55	□□□□□ -2
PICALM-222	ENST00000534375	SPPL2B	Q8TCT7	592 aa		2.55	□□□□□ -2
PICALM-222	ENST00000534375	SCGB1C1	Q8TD33	95 aa		2.55	□□□□□ -2
PICALM-222	ENST00000534375	CYGB	Q8WWM9	190 aa		2.55	□□□□□ -2
PICALM-222	ENST00000534375	MAL2	Q969L2	176 aa		2.55	□□□□□ -2
PICALM-222	ENST00000534375	TUBGCP6	Q96RT7	1819 aa		2.55	□□□□□ -2
PICALM-222	ENST00000534375	TBL1Y	Q9BQ87	522 aa		2.55	□□□□□ -2
PICALM-222	ENST00000534375	NDFIP1	Q9BT67	221 aa		2.55	□□□□□ -2
PICALM-222	ENST00000534375	TSSK6	Q9BXA6	273 aa		2.55	□□□□□ -2
PICALM-222	ENST00000534375	ZNF717	Q9BY31	904 aa	Predicted RBP	2.55	□□□□□ -2
PICALM-222	ENST00000534375	GNB1L	Q9BYB4	327 aa		2.55	□□□□□ -2
PICALM-222	ENST00000534375	TSGA10	Q9BZW7	698 aa		2.55	□□□□□ -2
PICALM-222	ENST00000534375	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	2.55	□□□□□ -2
PICALM-222	ENST00000534375	LINC00574	Q9H8X3	128 aa		2.55	□□□□□ -2
PICALM-222	ENST00000534375	MYO5B	Q9ULV0	1848 aa		2.55	□□□□□ -2
PICALM-222	ENST00000534375	C14orf166	Q9Y224	244 aa	Known RBP	2.55	□□□□□ -2
PICALM-222	ENST00000534375	YTHDF2	Q9Y5A9	579 aa	Known RBP	2.55	□□□□□ -2
PICALM-222	ENST00000534375	DSCAML1	Q8TD84	2053 aa		2.54	□□□□□ -2
PICALM-222	ENST00000534375	PTPRT	O14522	1441 aa		2.54	□□□□□ -2
PICALM-222	ENST00000534375	IGHV1-3	A0A0C4DH29	117 aa		2.54	□□□□□ -2
PICALM-222	ENST00000534375	CENPVL3	A0A0U1RRI6	287 aa		2.54	□□□□□ -2
PICALM-222	ENST00000534375		C9JQL5	133 aa		2.54	□□□□□ -2
PICALM-222	ENST00000534375		M0QYV0	167 aa		2.54	□□□□□ -2
PICALM-222	ENST00000534375	CXorf1	O96002	111 aa		2.54	□□□□□ -2
PICALM-222	ENST00000534375	LINC00614	P0C842	121 aa		2.54	□□□□□ -2
PICALM-222	ENST00000534375	GTF2F2	P13984	249 aa		2.54	□□□□□ -2
PICALM-222	ENST00000534375	CFL1	P23528	166 aa	Known RBP	2.54	□□□□□ -2
PICALM-222	ENST00000534375	GADD45A	P24522	165 aa		2.54	□□□□□ -2
PICALM-222	ENST00000534375	S100A2	P29034	98 aa		2.54	□□□□□ -2
PICALM-222	ENST00000534375	NOV	P48745	357 aa		2.54	□□□□□ -2
PICALM-222	ENST00000534375	MNAT1	P51948	309 aa		2.54	□□□□□ -2
PICALM-222	ENST00000534375	H2BFS	P57053	126 aa		2.54	□□□□□ -2
PICALM-222	ENST00000534375	TSPAN31	Q12999	210 aa		2.54	□□□□□ -2
PICALM-222	ENST00000534375	IHH	Q14623	411 aa		2.54	□□□□□ -2
PICALM-222	ENST00000534375	OR10K2	Q6IF99	312 aa		2.54	□□□□□ -2
PICALM-222	ENST00000534375	TNFAIP8L2	Q6P589	184 aa	Predicted RBP	2.54	□□□□□ -2
PICALM-222	ENST00000534375	ZFP2	Q6ZN57	461 aa		2.54	□□□□□ -2
PICALM-222	ENST00000534375	RASSF6	Q6ZTQ3	369 aa		2.54	□□□□□ -2
PICALM-222	ENST00000534375	NEGR1	Q7Z3B1	354 aa		2.54	□□□□□ -2
PICALM-222	ENST00000534375	S100A7A	Q86SG5	101 aa		2.54	□□□□□ -2
PICALM-222	ENST00000534375	NAA40	Q86UY6	237 aa		2.54	□□□□□ -2
PICALM-222	ENST00000534375	LYG1	Q8N1E2	194 aa		2.54	□□□□□ -2
PICALM-222	ENST00000534375	RNF175	Q8N4F7	328 aa		2.54	□□□□□ -2
PICALM-222	ENST00000534375	SLC35G3	Q8N808	338 aa		2.54	□□□□□ -2
PICALM-222	ENST00000534375	TMEM75	Q8N9X5	138 aa		2.54	□□□□□ -2
PICALM-222	ENST00000534375	CCDC112	Q8NEF3	446 aa		2.54	□□□□□ -2
PICALM-222	ENST00000534375	OR9I1	Q8NGQ6	314 aa		2.54	□□□□□ -2
PICALM-222	ENST00000534375	OR52N1	Q8NH53	320 aa		2.54	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms