RNA–Protein interactions for RNA: ENST00000534242.5

SHARPIN-209, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 2

Gene SHARPIN, Length 933 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-209ENST00000534242 MRPS18AQ9NVS2 196 aaKnown RBP18.01■□□□□ 0.47
SHARPIN-209ENST00000534242 IL36GQ9NZH8 169 aa18.01■□□□□ 0.47
SHARPIN-209ENST00000534242 ING4Q9UNL4 249 aa18.01■□□□□ 0.47
SHARPIN-209ENST00000534242 RPL36Q9Y3U8 105 aaKnown RBP18.01■□□□□ 0.47
SHARPIN-209ENST00000534242 IGHV3-72A0A0B4J1Y9 119 aa18■□□□□ 0.47
SHARPIN-209ENST00000534242 LIMS3P0CW19 117 aa18■□□□□ 0.47
SHARPIN-209ENST00000534242 LIMS4P0CW20 117 aa18■□□□□ 0.47
SHARPIN-209ENST00000534242 RBM11P57052 281 aaKnown RBP18■□□□□ 0.47
SHARPIN-209ENST00000534242 XAF1Q6GPH4 301 aa18■□□□□ 0.47
SHARPIN-209ENST00000534242 TGIF2LXQ8IUE1 241 aa18■□□□□ 0.47
SHARPIN-209ENST00000534242 IZUMO1Q8IYV9 350 aa18■□□□□ 0.47
SHARPIN-209ENST00000534242 TMEM106AQ96A25 262 aa18■□□□□ 0.47
SHARPIN-209ENST00000534242 DUX3Q96PT4 197 aa18■□□□□ 0.47
SHARPIN-209ENST00000534242 METTL9Q9H1A3 318 aa18■□□□□ 0.47
SHARPIN-209ENST00000534242 TMEM30CPA0ZSE6 113 aa17.99■□□□□ 0.47
SHARPIN-209ENST00000534242 NCBP2LA6PVI3 153 aaKnown RBP17.99■□□□□ 0.47
SHARPIN-209ENST00000534242 H0YHG0 523 aa17.99■□□□□ 0.47
SHARPIN-209ENST00000534242 C15orf65H3BRN8 121 aa17.99■□□□□ 0.47
SHARPIN-209ENST00000534242 GEMIN2O14893 280 aaKnown RBP17.99■□□□□ 0.47
SHARPIN-209ENST00000534242 CSTBP04080 98 aaKnown RBP17.99■□□□□ 0.47
SHARPIN-209ENST00000534242 ZNF93P35789 620 aaPredicted RBP17.99■□□□□ 0.47
SHARPIN-209ENST00000534242 GPR12P47775 334 aa17.99■□□□□ 0.47
SHARPIN-209ENST00000534242 KLHL22Q53GT1 634 aa17.99■□□□□ 0.47
SHARPIN-209ENST00000534242 DDI2Q5TDH0 399 aa17.99■□□□□ 0.47
SHARPIN-209ENST00000534242 TEX38Q6PEX7 206 aa17.99■□□□□ 0.47
SHARPIN-209ENST00000534242 UNQ9370/PRO34162Q6UXP9 181 aa17.99■□□□□ 0.47
SHARPIN-209ENST00000534242 LINC00311Q8N616 119 aa17.99■□□□□ 0.47
SHARPIN-209ENST00000534242 Q8N6K4 173 aa17.99■□□□□ 0.47
SHARPIN-209ENST00000534242 OR52M1Q8NGK5 317 aa17.99■□□□□ 0.47
SHARPIN-209ENST00000534242 OR52N1Q8NH53 320 aa17.99■□□□□ 0.47
SHARPIN-209ENST00000534242 APH1BQ8WW43 257 aa17.99■□□□□ 0.47
SHARPIN-209ENST00000534242 ARL11Q969Q4 196 aa17.99■□□□□ 0.47
SHARPIN-209ENST00000534242 ABCG5Q9H222 651 aa17.99■□□□□ 0.47
SHARPIN-209ENST00000534242 TMEM138Q9NPI0 162 aa17.99■□□□□ 0.47
SHARPIN-209ENST00000534242 LIN7CQ9NUP9 197 aaKnown RBP17.99■□□□□ 0.47
SHARPIN-209ENST00000534242 LOC100130705A0A1B0GUX0 176 aa17.98■□□□□ 0.47
SHARPIN-209ENST00000534242 AP4M1O00189 453 aa17.98■□□□□ 0.47
SHARPIN-209ENST00000534242 SDCBPO00560 298 aaPredicted RBP17.98■□□□□ 0.47
SHARPIN-209ENST00000534242 SERPINA2P20848 420 aa17.98■□□□□ 0.47
SHARPIN-209ENST00000534242 DCTN2Q13561 401 aaKnown RBP17.98■□□□□ 0.47
SHARPIN-209ENST00000534242 CCDC58Q4VC31 144 aa17.98■□□□□ 0.47
SHARPIN-209ENST00000534242 RPL22L1Q6P5R6 122 aaKnown RBP17.98■□□□□ 0.47
SHARPIN-209ENST00000534242 LINC00596Q86U02 117 aa17.98■□□□□ 0.47
SHARPIN-209ENST00000534242 Q8N9W7 124 aa17.98■□□□□ 0.47
SHARPIN-209ENST00000534242 OR2T10Q8NGZ9 312 aa17.98■□□□□ 0.47
SHARPIN-209ENST00000534242 UBALD1Q8TB05 177 aa17.98■□□□□ 0.47
SHARPIN-209ENST00000534242 RAX2Q96IS3 184 aa17.98■□□□□ 0.47
SHARPIN-209ENST00000534242 SLC29A1Q99808 456 aa17.98■□□□□ 0.47
SHARPIN-209ENST00000534242 C9orf16Q9BUW7 83 aa17.98■□□□□ 0.47
SHARPIN-209ENST00000534242 PPP3R1P63098 170 aa17.97■□□□□ 0.47
SHARPIN-209ENST00000534242 PNLIPRP3Q17RR3 467 aa17.97■□□□□ 0.47
SHARPIN-209ENST00000534242 MPV17LQ2QL34 196 aa17.97■□□□□ 0.47
SHARPIN-209ENST00000534242 FAM53AQ6NSI3 398 aaPredicted RBP17.97■□□□□ 0.47
SHARPIN-209ENST00000534242 C8orf31Q8N9H6 132 aa17.97■□□□□ 0.47
SHARPIN-209ENST00000534242 CCDC107Q8WV48 283 aa17.97■□□□□ 0.47
SHARPIN-209ENST00000534242 ST6GALNAC6Q969X2 333 aa17.97■□□□□ 0.47
SHARPIN-209ENST00000534242 S100A13Q99584 98 aa17.97■□□□□ 0.47
SHARPIN-209ENST00000534242 GFOD1Q9NXC2 390 aa17.97■□□□□ 0.47
SHARPIN-209ENST00000534242 ZMAT5Q9UDW3 170 aaKnown RBP17.97■□□□□ 0.47
SHARPIN-209ENST00000534242 IGHV3-43A0A0B4J1X8 118 aa17.96■□□□□ 0.47
SHARPIN-209ENST00000534242 CCL24O00175 119 aa17.96■□□□□ 0.47
SHARPIN-209ENST00000534242 ORC5O43913 435 aa17.96■□□□□ 0.47
SHARPIN-209ENST00000534242 RPLP1P05386 114 aaKnown RBP17.96■□□□□ 0.47
SHARPIN-209ENST00000534242 IGHV3-43DP0DP04 118 aa17.96■□□□□ 0.47
SHARPIN-209ENST00000534242 BDKRB2P30411 391 aa17.96■□□□□ 0.47
SHARPIN-209ENST00000534242 RAB25P57735 213 aa17.96■□□□□ 0.47
SHARPIN-209ENST00000534242 DGCR2P98153 550 aa17.96■□□□□ 0.47
SHARPIN-209ENST00000534242 ATAD3CQ5T2N8 411 aa17.96■□□□□ 0.47
SHARPIN-209ENST00000534242 TMEM104Q8NE00 496 aa17.96■□□□□ 0.47
SHARPIN-209ENST00000534242 RTN4IP1Q8WWV3 396 aaPredicted RBP17.96■□□□□ 0.47
SHARPIN-209ENST00000534242 WWC2-AS2Q96NR7 200 aa17.96■□□□□ 0.47
SHARPIN-209ENST00000534242 GON7Q9BXV9 100 aa17.96■□□□□ 0.47
SHARPIN-209ENST00000534242 DCLRE1BQ9H816 532 aa17.96■□□□□ 0.47
SHARPIN-209ENST00000534242 FGF20Q9NP95 211 aaPredicted RBP17.96■□□□□ 0.47
SHARPIN-209ENST00000534242 PAK1IP1Q9NWT1 392 aaPredicted RBP17.96■□□□□ 0.47
SHARPIN-209ENST00000534242 RYR3Q15413 4870 aa17.96■□□□□ 0.47
SHARPIN-209ENST00000534242 COL7A1Q02388 2944 aa17.96■□□□□ 0.47
SHARPIN-209ENST00000534242 NBEAL2Q6ZNJ1 2754 aa17.95■□□□□ 0.46
SHARPIN-209ENST00000534242 A0A1W2PP11 408 aa17.95■□□□□ 0.46
SHARPIN-209ENST00000534242 ZNF780AO75290 641 aaPredicted RBP17.95■□□□□ 0.46
SHARPIN-209ENST00000534242 VSIG8P0DPA2 414 aa17.95■□□□□ 0.46
SHARPIN-209ENST00000534242 IL3RAP26951 378 aa17.95■□□□□ 0.46
SHARPIN-209ENST00000534242 SMN1Q16637 294 aaKnown RBP17.95■□□□□ 0.46
SHARPIN-209ENST00000534242 OR2G6Q5TZ20 316 aa17.95■□□□□ 0.46
SHARPIN-209ENST00000534242 NEK7Q8TDX7 302 aa17.95■□□□□ 0.46
SHARPIN-209ENST00000534242 TFAP2CQ92754 450 aa17.95■□□□□ 0.46
SHARPIN-209ENST00000534242 ORAI1Q96D31 301 aa17.95■□□□□ 0.46
SHARPIN-209ENST00000534242 PLSCR3Q9NRY6 295 aa17.95■□□□□ 0.46
SHARPIN-209ENST00000534242 SIRT4Q9Y6E7 314 aaPredicted RBP17.95■□□□□ 0.46
SHARPIN-209ENST00000534242 MOSP00540 346 aa17.94■□□□□ 0.46
SHARPIN-209ENST00000534242 MT-ND4P03905 459 aa17.94■□□□□ 0.46
SHARPIN-209ENST00000534242 CD1BP29016 333 aa17.94■□□□□ 0.46
SHARPIN-209ENST00000534242 ETV1P50549 477 aa17.94■□□□□ 0.46
SHARPIN-209ENST00000534242 GP2P55259 537 aaKnown RBP17.94■□□□□ 0.46
SHARPIN-209ENST00000534242 GPR50Q13585 617 aa17.94■□□□□ 0.46
SHARPIN-209ENST00000534242 DEFB136Q30KP8 78 aa17.94■□□□□ 0.46
SHARPIN-209ENST00000534242 CXorf66Q5JRM2 361 aaPredicted RBP17.94■□□□□ 0.46
SHARPIN-209ENST00000534242 ZNF497Q6ZNH5 498 aa17.94■□□□□ 0.46
SHARPIN-209ENST00000534242 LCNL1Q6ZST4 164 aa17.94■□□□□ 0.46
SHARPIN-209ENST00000534242 OR8U1Q8NH10 309 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms