RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 SGCEO43556 437 aa6.92□□□□□ -1.3
NEDD8-207ENST00000533242 SCGNO76038 276 aa6.92□□□□□ -1.3
NEDD8-207ENST00000533242 VAMP5O95183 116 aa6.92□□□□□ -1.3
NEDD8-207ENST00000533242 IGKV1D-12P01611 117 aa6.92□□□□□ -1.3
NEDD8-207ENST00000533242 LYNX1P0DP58 116 aa6.92□□□□□ -1.3
NEDD8-207ENST00000533242 PGAM2P15259 253 aa6.92□□□□□ -1.3
NEDD8-207ENST00000533242 ZNF32P17041 273 aa6.92□□□□□ -1.3
NEDD8-207ENST00000533242 TBPP20226 339 aa6.92□□□□□ -1.3
NEDD8-207ENST00000533242 NUP62P37198 522 aaPredicted RBP6.92□□□□□ -1.3
NEDD8-207ENST00000533242 GUCA1AP43080 201 aaPredicted RBP6.92□□□□□ -1.3
NEDD8-207ENST00000533242 ZNF345Q14585 488 aa6.92□□□□□ -1.3
NEDD8-207ENST00000533242 SMUG1Q53HV7 270 aa6.92□□□□□ -1.3
NEDD8-207ENST00000533242 TMEM128Q5BJH2 165 aa6.92□□□□□ -1.3
NEDD8-207ENST00000533242 FAHD2BQ6P2I3 314 aaPredicted RBP6.92□□□□□ -1.3
NEDD8-207ENST00000533242 SHISA2Q6UWI4 295 aa6.92□□□□□ -1.3
NEDD8-207ENST00000533242 DRAM2Q6UX65 266 aa6.92□□□□□ -1.3
NEDD8-207ENST00000533242 ACOT7LQ6ZUV0 252 aa6.92□□□□□ -1.3
NEDD8-207ENST00000533242 PDZD9Q8IXQ8 264 aa6.92□□□□□ -1.3
NEDD8-207ENST00000533242 BATF2Q8N1L9 274 aa6.92□□□□□ -1.3
NEDD8-207ENST00000533242 CSNK2A3Q8NEV1 391 aa6.92□□□□□ -1.3
NEDD8-207ENST00000533242 OR5H2Q8NGV7 314 aa6.92□□□□□ -1.3
NEDD8-207ENST00000533242 MRPS24Q96EL2 167 aaKnown RBP6.92□□□□□ -1.3
NEDD8-207ENST00000533242 FAHD2AQ96GK7 314 aa6.92□□□□□ -1.3
NEDD8-207ENST00000533242 URM1Q9BTM9 101 aaKnown RBP6.92□□□□□ -1.3
NEDD8-207ENST00000533242 CHMP1AQ9HD42 196 aaPredicted RBP6.92□□□□□ -1.3
NEDD8-207ENST00000533242 EHFQ9NZC4 300 aa6.92□□□□□ -1.3
NEDD8-207ENST00000533242 OR5AC2Q9NZP5 309 aa6.92□□□□□ -1.3
NEDD8-207ENST00000533242 A0A0D9SG52 128 aa6.91□□□□□ -1.3
NEDD8-207ENST00000533242 FAM230AA0A1W2PPH8 454 aa6.91□□□□□ -1.3
NEDD8-207ENST00000533242 OR2F2O95006 317 aa6.91□□□□□ -1.3
NEDD8-207ENST00000533242 CELA3BP08861 270 aa6.91□□□□□ -1.3
NEDD8-207ENST00000533242 ARR3P36575 388 aa6.91□□□□□ -1.3
NEDD8-207ENST00000533242 ARHGDIBP52566 201 aa6.91□□□□□ -1.3
NEDD8-207ENST00000533242 PSG4Q00888 419 aa6.91□□□□□ -1.3
NEDD8-207ENST00000533242 FGL1Q08830 312 aa6.91□□□□□ -1.3
NEDD8-207ENST00000533242 BTN1A1Q13410 526 aa6.91□□□□□ -1.3
NEDD8-207ENST00000533242 OR2F1Q13607 317 aa6.91□□□□□ -1.3
NEDD8-207ENST00000533242 PDCD1Q15116 288 aa6.91□□□□□ -1.3
NEDD8-207ENST00000533242 TAF9Q16594 264 aa6.91□□□□□ -1.3
NEDD8-207ENST00000533242 PNLIPRP3Q17RR3 467 aa6.91□□□□□ -1.3
NEDD8-207ENST00000533242 NKAPLQ5M9Q1 402 aa6.91□□□□□ -1.3
NEDD8-207ENST00000533242 ELP2Q6IA86 826 aa6.91□□□□□ -1.3
NEDD8-207ENST00000533242 Q6ZPA2 131 aa6.91□□□□□ -1.3
NEDD8-207ENST00000533242 OVCH2Q7RTZ1 564 aa6.91□□□□□ -1.3
NEDD8-207ENST00000533242 ARRDC1Q8N5I2 433 aa6.91□□□□□ -1.3
NEDD8-207ENST00000533242 PP6455Q8WZ26 134 aa6.91□□□□□ -1.3
NEDD8-207ENST00000533242 RDH5Q92781 318 aa6.91□□□□□ -1.3
NEDD8-207ENST00000533242 Q96M66 194 aa6.91□□□□□ -1.3
NEDD8-207ENST00000533242 TM2D1Q9BX74 207 aa6.91□□□□□ -1.3
NEDD8-207ENST00000533242 TMEM38BQ9NVV0 291 aa6.91□□□□□ -1.3
NEDD8-207ENST00000533242 COMMD9Q9P000 198 aa6.91□□□□□ -1.3
NEDD8-207ENST00000533242 TENM1Q9UKZ4 2725 aa6.9□□□□□ -1.3
NEDD8-207ENST00000533242 A0A096LPE4 126 aa6.9□□□□□ -1.3
NEDD8-207ENST00000533242 A0A1W2PPZ6 126 aa6.9□□□□□ -1.3
NEDD8-207ENST00000533242 RPL36A-HNRNPH2H7BZ11 118 aa6.9□□□□□ -1.3
NEDD8-207ENST00000533242 TMPRSS2O15393 492 aa6.9□□□□□ -1.3
NEDD8-207ENST00000533242 NUPL2O15504 423 aaKnown RBP6.9□□□□□ -1.3
NEDD8-207ENST00000533242 SFT2D2O95562 160 aa6.9□□□□□ -1.3
NEDD8-207ENST00000533242 UBBP0CG47 229 aa6.9□□□□□ -1.3
NEDD8-207ENST00000533242 M6PRP20645 277 aa6.9□□□□□ -1.3
NEDD8-207ENST00000533242 PSMB6P28072 239 aa6.9□□□□□ -1.3
NEDD8-207ENST00000533242 MTCP1P56278 107 aa6.9□□□□□ -1.3
NEDD8-207ENST00000533242 UBA52P62987 128 aaKnown RBP6.9□□□□□ -1.3
NEDD8-207ENST00000533242 MRPS11P82912 194 aaKnown RBP6.9□□□□□ -1.3
NEDD8-207ENST00000533242 CEACAM16Q2WEN9 425 aa6.9□□□□□ -1.3
NEDD8-207ENST00000533242 MOB3CQ70IA8 216 aa6.9□□□□□ -1.3
NEDD8-207ENST00000533242 MYPOPQ86VE0 399 aaPredicted RBP6.9□□□□□ -1.3
NEDD8-207ENST00000533242 CCDC36Q8IYA8 594 aa6.9□□□□□ -1.3
NEDD8-207ENST00000533242 GPR137CQ8N3F9 429 aa6.9□□□□□ -1.3
NEDD8-207ENST00000533242 TMEM185AQ8NFB2 350 aa6.9□□□□□ -1.3
NEDD8-207ENST00000533242 PXT1Q8NFP0 134 aa6.9□□□□□ -1.3
NEDD8-207ENST00000533242 MRPL24Q96A35 216 aaKnown RBP6.9□□□□□ -1.3
NEDD8-207ENST00000533242 MARS2Q96GW9 593 aaKnown RBP6.9□□□□□ -1.3
NEDD8-207ENST00000533242 REEP6Q96HR9 211 aa6.9□□□□□ -1.3
NEDD8-207ENST00000533242 FAAP24Q9BTP7 215 aa6.9□□□□□ -1.3
NEDD8-207ENST00000533242 WNT5BQ9H1J7 359 aa6.9□□□□□ -1.3
NEDD8-207ENST00000533242 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.9□□□□□ -1.3
NEDD8-207ENST00000533242 PFDN2Q9UHV9 154 aa6.9□□□□□ -1.3
NEDD8-207ENST00000533242 MEGF8Q7Z7M0 2845 aa6.9□□□□□ -1.3
NEDD8-207ENST00000533242 KANTRA0A1W2PQU2 76 aa6.9□□□□□ -1.31
NEDD8-207ENST00000533242 OR6C6A6NF89 314 aa6.9□□□□□ -1.31
NEDD8-207ENST00000533242 KNG1P01042 644 aa6.9□□□□□ -1.31
NEDD8-207ENST00000533242 LCATP04180 440 aa6.9□□□□□ -1.31
NEDD8-207ENST00000533242 TMEM225BP0DP42 221 aa6.9□□□□□ -1.31
NEDD8-207ENST00000533242 COL8A2P25067 703 aa6.9□□□□□ -1.31
NEDD8-207ENST00000533242 FPR2P25090 351 aa6.9□□□□□ -1.31
NEDD8-207ENST00000533242 ZNF84P51523 738 aa6.9□□□□□ -1.31
NEDD8-207ENST00000533242 TMEM33P57088 247 aa6.9□□□□□ -1.31
NEDD8-207ENST00000533242 LMO4P61968 165 aa6.9□□□□□ -1.31
NEDD8-207ENST00000533242 ARF1P84077 181 aaKnown RBP6.9□□□□□ -1.31
NEDD8-207ENST00000533242 ZNF92Q03936 586 aa6.9□□□□□ -1.31
NEDD8-207ENST00000533242 PIGYQ3MUY2 71 aa6.9□□□□□ -1.31
NEDD8-207ENST00000533242 HSD17B13Q7Z5P4 300 aaPredicted RBP6.9□□□□□ -1.31
NEDD8-207ENST00000533242 C5orf24Q7Z6I8 188 aa6.9□□□□□ -1.31
NEDD8-207ENST00000533242 SKA3Q8IX90 412 aa6.9□□□□□ -1.31
NEDD8-207ENST00000533242 OR5AP2Q8NGF4 316 aa6.9□□□□□ -1.31
NEDD8-207ENST00000533242 OR1F12Q8NHA8 337 aa6.9□□□□□ -1.31
NEDD8-207ENST00000533242 DCUN1D4Q92564 292 aa6.9□□□□□ -1.31
NEDD8-207ENST00000533242 EMG1Q92979 244 aaKnown RBP6.9□□□□□ -1.31
NEDD8-207ENST00000533242 MS4A5Q9H3V2 200 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms