RNA–Protein interactions for RNA: ENST00000533145.5

HIF3A-215, Transcript of hypoxia inducible factor 3 subunit alpha, human

TSL 4

Gene HIF3A, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HIF3A-215	ENST00000533145	TRDC	B7Z8K6	153 aa		11.65	□□□□□ -0.54
HIF3A-215	ENST00000533145	GNB2	P62879	340 aa		11.65	□□□□□ -0.54
HIF3A-215	ENST00000533145	RPL31	P62899	125 aa	Known RBP	11.65	□□□□□ -0.54
HIF3A-215	ENST00000533145	HMGN3	Q15651	99 aa		11.65	□□□□□ -0.54
HIF3A-215	ENST00000533145	ACTBL2	Q562R1	376 aa		11.65	□□□□□ -0.54
HIF3A-215	ENST00000533145	ESCO2	Q56NI9	601 aa		11.65	□□□□□ -0.54
HIF3A-215	ENST00000533145	CD276	Q5ZPR3	534 aa		11.65	□□□□□ -0.54
HIF3A-215	ENST00000533145	STEAP3	Q658P3	488 aa		11.65	□□□□□ -0.54
HIF3A-215	ENST00000533145	C16orf87	Q6PH81	154 aa		11.65	□□□□□ -0.54
HIF3A-215	ENST00000533145	TPRX1	Q8N7U7	411 aa		11.65	□□□□□ -0.54
HIF3A-215	ENST00000533145	LY6G5B	Q8NDX9	201 aa		11.65	□□□□□ -0.54
HIF3A-215	ENST00000533145	OR5AP2	Q8NGF4	316 aa		11.65	□□□□□ -0.54
HIF3A-215	ENST00000533145	OR13A1	Q8NGR1	328 aa		11.65	□□□□□ -0.54
HIF3A-215	ENST00000533145	CCDC107	Q8WV48	283 aa		11.65	□□□□□ -0.54
HIF3A-215	ENST00000533145	C7orf50	Q9BRJ6	194 aa	Known RBP	11.65	□□□□□ -0.54
HIF3A-215	ENST00000533145	SSBP3	Q9BWW4	388 aa	Predicted RBP	11.65	□□□□□ -0.54
HIF3A-215	ENST00000533145	ABCB10	Q9NRK6	738 aa		11.65	□□□□□ -0.54
HIF3A-215	ENST00000533145	KCNIP1	Q9NZI2	227 aa		11.65	□□□□□ -0.54
HIF3A-215	ENST00000533145	CENPE	Q02224	2701 aa		11.65	□□□□□ -0.55
HIF3A-215	ENST00000533145	TACC2	O95359	2948 aa		11.64	□□□□□ -0.55
HIF3A-215	ENST00000533145	ABCA12	Q86UK0	2595 aa		11.64	□□□□□ -0.55
HIF3A-215	ENST00000533145	TRGV10	A0A0A0MS01	117 aa		11.64	□□□□□ -0.55
HIF3A-215	ENST00000533145	IGHV4-61	A0A0C4DH41	118 aa		11.64	□□□□□ -0.55
HIF3A-215	ENST00000533145	ZNF729	A6NN14	1252 aa	Predicted RBP	11.64	□□□□□ -0.55
HIF3A-215	ENST00000533145	ZNF736	B4DX44	427 aa	Predicted RBP	11.64	□□□□□ -0.55
HIF3A-215	ENST00000533145	C15orf65	H3BRN8	121 aa		11.64	□□□□□ -0.55
HIF3A-215	ENST00000533145	PLA2G10	O15496	165 aa		11.64	□□□□□ -0.55
HIF3A-215	ENST00000533145	CTXN2	P0C2S0	81 aa		11.64	□□□□□ -0.55
HIF3A-215	ENST00000533145	GSTT2	P0CG29	244 aa		11.64	□□□□□ -0.55
HIF3A-215	ENST00000533145	AKAIN1	P0CW23	69 aa		11.64	□□□□□ -0.55
HIF3A-215	ENST00000533145	INPP1	P49441	399 aa		11.64	□□□□□ -0.55
HIF3A-215	ENST00000533145	TAS2R46	P59540	309 aa		11.64	□□□□□ -0.55
HIF3A-215	ENST00000533145	SEC61A1	P61619	476 aa	Known RBP	11.64	□□□□□ -0.55
HIF3A-215	ENST00000533145	HLA-DRB3	P79483	266 aa		11.64	□□□□□ -0.55
HIF3A-215	ENST00000533145		Q5PR19	223 aa		11.64	□□□□□ -0.55
HIF3A-215	ENST00000533145	VAX1	Q5SQQ9	334 aa		11.64	□□□□□ -0.55
HIF3A-215	ENST00000533145	ZNF57	Q68EA5	555 aa	Predicted RBP	11.64	□□□□□ -0.55
HIF3A-215	ENST00000533145	TMEM200B	Q69YZ2	307 aa		11.64	□□□□□ -0.55
HIF3A-215	ENST00000533145	OR52W1	Q6IF63	320 aa		11.64	□□□□□ -0.55
HIF3A-215	ENST00000533145	STEAP1B	Q6NZ63	245 aa		11.64	□□□□□ -0.55
HIF3A-215	ENST00000533145	BTN2A1	Q7KYR7	527 aa		11.64	□□□□□ -0.55
HIF3A-215	ENST00000533145	TCF23	Q7RTU1	214 aa		11.64	□□□□□ -0.55
HIF3A-215	ENST00000533145	OR4A4P	Q8NGN8	299 aa		11.64	□□□□□ -0.55
HIF3A-215	ENST00000533145	SETD6	Q8TBK2	473 aa		11.64	□□□□□ -0.55
HIF3A-215	ENST00000533145	C1orf159	Q96HA4	380 aa		11.64	□□□□□ -0.55
HIF3A-215	ENST00000533145	NARFL	Q9H6Q4	476 aa		11.64	□□□□□ -0.55
HIF3A-215	ENST00000533145	TAF9B	Q9HBM6	251 aa		11.64	□□□□□ -0.55
HIF3A-215	ENST00000533145	RAB9B	Q9NP90	201 aa		11.64	□□□□□ -0.55
HIF3A-215	ENST00000533145	C19orf12	Q9NSK7	152 aa		11.64	□□□□□ -0.55
HIF3A-215	ENST00000533145	ING3	Q9NXR8	418 aa		11.64	□□□□□ -0.55
HIF3A-215	ENST00000533145	ITPR2	Q14571	2701 aa		11.64	□□□□□ -0.55
HIF3A-215	ENST00000533145	PRRC2A	P48634	2157 aa	Known RBP	11.63	□□□□□ -0.55
HIF3A-215	ENST00000533145	NAP1L6	A6NFF2	107 aa		11.63	□□□□□ -0.55
HIF3A-215	ENST00000533145	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	11.63	□□□□□ -0.55
HIF3A-215	ENST00000533145	C12orf77	C9JDV5	145 aa		11.63	□□□□□ -0.55
HIF3A-215	ENST00000533145	NPIPB11	E5RHQ5	1161 aa		11.63	□□□□□ -0.55
HIF3A-215	ENST00000533145	FABP7	O15540	132 aa		11.63	□□□□□ -0.55
HIF3A-215	ENST00000533145	CD3D	P04234	171 aa		11.63	□□□□□ -0.55
HIF3A-215	ENST00000533145	HEXA	P06865	529 aa		11.63	□□□□□ -0.55
HIF3A-215	ENST00000533145	SCT	P09683	121 aa		11.63	□□□□□ -0.55
HIF3A-215	ENST00000533145	USF1	P22415	310 aa	Predicted RBP	11.63	□□□□□ -0.55
HIF3A-215	ENST00000533145	HLA-DMA	P28067	261 aa		11.63	□□□□□ -0.55
HIF3A-215	ENST00000533145	LOXL1	Q08397	574 aa	Predicted RBP	11.63	□□□□□ -0.55
HIF3A-215	ENST00000533145	ASAH1	Q13510	395 aa		11.63	□□□□□ -0.55
HIF3A-215	ENST00000533145	CDK10	Q15131	360 aa		11.63	□□□□□ -0.55
HIF3A-215	ENST00000533145	C17orf58	Q2M2W7	97 aa		11.63	□□□□□ -0.55
HIF3A-215	ENST00000533145	OVCH2	Q7RTZ1	564 aa		11.63	□□□□□ -0.55
HIF3A-215	ENST00000533145	OR10A7	Q8NGE5	316 aa		11.63	□□□□□ -0.55
HIF3A-215	ENST00000533145	MRGPRD	Q8TDS7	321 aa		11.63	□□□□□ -0.55
HIF3A-215	ENST00000533145	MAFIP	Q8WZ33	124 aa		11.63	□□□□□ -0.55
HIF3A-215	ENST00000533145	H1FX	Q92522	213 aa	Known RBP	11.63	□□□□□ -0.55
HIF3A-215	ENST00000533145	CABLES2	Q9BTV7	478 aa		11.63	□□□□□ -0.55
HIF3A-215	ENST00000533145	HRASLS	Q9HDD0	168 aa		11.63	□□□□□ -0.55
HIF3A-215	ENST00000533145	RPUSD1	Q9UJJ7	312 aa	Known RBP	11.63	□□□□□ -0.55
HIF3A-215	ENST00000533145	LOC105371242	A0A075B767	164 aa		11.62	□□□□□ -0.55
HIF3A-215	ENST00000533145	TRAV39	A0A0B4J263	110 aa		11.62	□□□□□ -0.55
HIF3A-215	ENST00000533145	KBTBD11-OT1	A0A1B0GTJ5	212 aa		11.62	□□□□□ -0.55
HIF3A-215	ENST00000533145	F2RL2	O00254	374 aa		11.62	□□□□□ -0.55
HIF3A-215	ENST00000533145	FOXH1	O75593	365 aa		11.62	□□□□□ -0.55
HIF3A-215	ENST00000533145	RAB3D	O95716	219 aa		11.62	□□□□□ -0.55
HIF3A-215	ENST00000533145	FAU	P35544	74 aa	Known RBP	11.62	□□□□□ -0.55
HIF3A-215	ENST00000533145	GLP1R	P43220	463 aa		11.62	□□□□□ -0.55
HIF3A-215	ENST00000533145	DLX6	P56179	175 aa		11.62	□□□□□ -0.55
HIF3A-215	ENST00000533145	HTD2	P86397	168 aa		11.62	□□□□□ -0.55
HIF3A-215	ENST00000533145	PAX2	Q02962	417 aa		11.62	□□□□□ -0.55
HIF3A-215	ENST00000533145	MEF2D	Q14814	521 aa		11.62	□□□□□ -0.55
HIF3A-215	ENST00000533145	CHRFAM7A	Q494W8	412 aa		11.62	□□□□□ -0.55
HIF3A-215	ENST00000533145	ARL11	Q969Q4	196 aa		11.62	□□□□□ -0.55
HIF3A-215	ENST00000533145	DACT3	Q96B18	629 aa	Predicted RBP	11.62	□□□□□ -0.55
HIF3A-215	ENST00000533145	COX4I2	Q96KJ9	171 aa		11.62	□□□□□ -0.55
HIF3A-215	ENST00000533145	TOLLIP	Q9H0E2	274 aa		11.62	□□□□□ -0.55
HIF3A-215	ENST00000533145	NECAP2	Q9NVZ3	263 aa		11.62	□□□□□ -0.55
HIF3A-215	ENST00000533145	TBC1D24	Q9ULP9	559 aa		11.62	□□□□□ -0.55
HIF3A-215	ENST00000533145	ARHGAP32	A7KAX9	2087 aa		11.62	□□□□□ -0.55
HIF3A-215	ENST00000533145	PDZD2	O15018	2839 aa		11.62	□□□□□ -0.55
HIF3A-215	ENST00000533145	TRBV6-7	A0A0A0MS04	114 aa		11.61	□□□□□ -0.55
HIF3A-215	ENST00000533145	PPIAL4C	A0A0B4J2A2	164 aa		11.61	□□□□□ -0.55
HIF3A-215	ENST00000533145	IGKV1-6	A0A0C4DH72	117 aa		11.61	□□□□□ -0.55
HIF3A-215	ENST00000533145		A0A1W2PPH5	198 aa		11.61	□□□□□ -0.55
HIF3A-215	ENST00000533145	CENPX	A8MT69	81 aa		11.61	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 84 ms