RNA–Protein interactions for RNA: ENST00000532925.5

ATPAF1-210, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-210ENST00000532925 CCNOP22674 350 aa4.85□□□□□ -1.63
ATPAF1-210ENST00000532925 AADACP22760 399 aa4.85□□□□□ -1.63
ATPAF1-210ENST00000532925 LMO1P25800 156 aa4.85□□□□□ -1.63
ATPAF1-210ENST00000532925 RPL12P30050 165 aaKnown RBP4.85□□□□□ -1.63
ATPAF1-210ENST00000532925 CD200P41217 278 aa4.85□□□□□ -1.63
ATPAF1-210ENST00000532925 NBL1P41271 181 aa4.85□□□□□ -1.63
ATPAF1-210ENST00000532925 KIR2DL2P43627 348 aaPredicted RBP4.85□□□□□ -1.63
ATPAF1-210ENST00000532925 SULT1A2P50226 295 aa4.85□□□□□ -1.63
ATPAF1-210ENST00000532925 RAB5CP51148 216 aa4.85□□□□□ -1.63
ATPAF1-210ENST00000532925 KRTAP10-2P60368 255 aa4.85□□□□□ -1.63
ATPAF1-210ENST00000532925 BLOC1S1P78537 153 aa4.85□□□□□ -1.63
ATPAF1-210ENST00000532925 ATXN7L3Q14CW9 347 aaPredicted RBP4.85□□□□□ -1.63
ATPAF1-210ENST00000532925 C3AR1Q16581 482 aa4.85□□□□□ -1.63
ATPAF1-210ENST00000532925 ACSF3Q4G176 576 aaPredicted RBP4.85□□□□□ -1.63
ATPAF1-210ENST00000532925 HIKESHIQ53FT3 197 aa4.85□□□□□ -1.63
ATPAF1-210ENST00000532925 DMRTC1Q5HYR2 192 aa4.85□□□□□ -1.63
ATPAF1-210ENST00000532925 C9orf135Q5VTT2 229 aa4.85□□□□□ -1.63
ATPAF1-210ENST00000532925 MBNL2Q5VZF2 373 aaKnown RBP4.85□□□□□ -1.63
ATPAF1-210ENST00000532925 TMEM268Q5VZI3 342 aa4.85□□□□□ -1.63
ATPAF1-210ENST00000532925 ZNF585AQ6P3V2 769 aa4.85□□□□□ -1.63
ATPAF1-210ENST00000532925 Q6P435 159 aa4.85□□□□□ -1.63
ATPAF1-210ENST00000532925 HAGHLQ6PII5 290 aaPredicted RBP4.85□□□□□ -1.63
ATPAF1-210ENST00000532925 PCSK4Q6UW60 755 aa4.85□□□□□ -1.63
ATPAF1-210ENST00000532925 Q6ZPA2 131 aa4.85□□□□□ -1.63
ATPAF1-210ENST00000532925 SSX8Q7RTT4 187 aa4.85□□□□□ -1.63
ATPAF1-210ENST00000532925 REC114Q7Z4M0 266 aa4.85□□□□□ -1.63
ATPAF1-210ENST00000532925 FAM90A1Q86YD7 464 aa4.85□□□□□ -1.63
ATPAF1-210ENST00000532925 H1FOOQ8IZA3 346 aaPredicted RBP4.85□□□□□ -1.63
ATPAF1-210ENST00000532925 SPAG16Q8N0X2 631 aa4.85□□□□□ -1.63
ATPAF1-210ENST00000532925 ZADH2Q8N4Q0 377 aa4.85□□□□□ -1.63
ATPAF1-210ENST00000532925 TCTEX1D1Q8N7M0 179 aa4.85□□□□□ -1.63
ATPAF1-210ENST00000532925 ZNF565Q8N9K5 539 aa4.85□□□□□ -1.63
ATPAF1-210ENST00000532925 SUMF2Q8NBJ7 301 aa4.85□□□□□ -1.63
ATPAF1-210ENST00000532925 ZBTB34Q8NCN2 500 aa4.85□□□□□ -1.63
ATPAF1-210ENST00000532925 OR5D13Q8NGL4 314 aa4.85□□□□□ -1.63
ATPAF1-210ENST00000532925 OR4D5Q8NGN0 318 aa4.85□□□□□ -1.63
ATPAF1-210ENST00000532925 MRPL30Q8TCC3 161 aaKnown RBP4.85□□□□□ -1.63
ATPAF1-210ENST00000532925 C17orf50Q8WW18 174 aa4.85□□□□□ -1.63
ATPAF1-210ENST00000532925 TOMM40LQ969M1 308 aa4.85□□□□□ -1.63
ATPAF1-210ENST00000532925 MARC2Q969Z3 335 aa4.85□□□□□ -1.63
ATPAF1-210ENST00000532925 MRPL24Q96A35 216 aaKnown RBP4.85□□□□□ -1.63
ATPAF1-210ENST00000532925 RRNAD1Q96FB5 475 aaKnown RBP4.85□□□□□ -1.63
ATPAF1-210ENST00000532925 EAF1Q96JC9 268 aaPredicted RBP4.85□□□□□ -1.63
ATPAF1-210ENST00000532925 AKR1E2Q96JD6 320 aa4.85□□□□□ -1.63
ATPAF1-210ENST00000532925 NRIP2Q9BQI9 281 aa4.85□□□□□ -1.63
ATPAF1-210ENST00000532925 MMP26Q9NRE1 261 aa4.85□□□□□ -1.63
ATPAF1-210ENST00000532925 DLL3Q9NYJ7 618 aa4.85□□□□□ -1.63
ATPAF1-210ENST00000532925 OR5AC2Q9NZP5 309 aa4.85□□□□□ -1.63
ATPAF1-210ENST00000532925 LPAR3Q9UBY5 353 aa4.85□□□□□ -1.63
ATPAF1-210ENST00000532925 OR2W1Q9Y3N9 320 aa4.85□□□□□ -1.63
ATPAF1-210ENST00000532925 WIPI2Q9Y4P8 454 aa4.85□□□□□ -1.63
ATPAF1-210ENST00000532925 INTS1Q8N201 2190 aaKnown RBP4.85□□□□□ -1.63
ATPAF1-210ENST00000532925 TTC28Q96AY4 2481 aa4.84□□□□□ -1.63
ATPAF1-210ENST00000532925 BORCS7-ASMTA0A0B4J1R7 106 aa4.84□□□□□ -1.63
ATPAF1-210ENST00000532925 TRAV24A0A0B4J272 114 aa4.84□□□□□ -1.63
ATPAF1-210ENST00000532925 MSGN1A6NI15 193 aa4.84□□□□□ -1.63
ATPAF1-210ENST00000532925 MPTX1A8MV57 137 aa4.84□□□□□ -1.63
ATPAF1-210ENST00000532925 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.84□□□□□ -1.63
ATPAF1-210ENST00000532925 IFNL4K9M1U5 179 aa4.84□□□□□ -1.63
ATPAF1-210ENST00000532925 NKX2-8O15522 239 aa4.84□□□□□ -1.63
ATPAF1-210ENST00000532925 SYNGR1O43759 233 aa4.84□□□□□ -1.63
ATPAF1-210ENST00000532925 WDR1O75083 606 aa4.84□□□□□ -1.63
ATPAF1-210ENST00000532925 PTBP3O95758 552 aaKnown RBP4.84□□□□□ -1.63
ATPAF1-210ENST00000532925 MBPP02686 304 aaPredicted RBP4.84□□□□□ -1.63
ATPAF1-210ENST00000532925 SEC11BP0C7V7 166 aa4.84□□□□□ -1.63
ATPAF1-210ENST00000532925 FAM157CP0CG43 387 aa4.84□□□□□ -1.63
ATPAF1-210ENST00000532925 CCL2P13500 99 aa4.84□□□□□ -1.63
ATPAF1-210ENST00000532925 ZNF250P15622 560 aa4.84□□□□□ -1.63
ATPAF1-210ENST00000532925 PVALBP20472 110 aaPredicted RBP4.84□□□□□ -1.63
ATPAF1-210ENST00000532925 GNRHRP30968 328 aa4.84□□□□□ -1.63
ATPAF1-210ENST00000532925 CFHR2P36980 270 aa4.84□□□□□ -1.63
ATPAF1-210ENST00000532925 CCL11P51671 97 aa4.84□□□□□ -1.63
ATPAF1-210ENST00000532925 UCP2P55851 309 aa4.84□□□□□ -1.63
ATPAF1-210ENST00000532925 FXYD4P59646 89 aa4.84□□□□□ -1.63
ATPAF1-210ENST00000532925 S100A10P60903 97 aa4.84□□□□□ -1.63
ATPAF1-210ENST00000532925 BAXQ07812 192 aa4.84□□□□□ -1.63
ATPAF1-210ENST00000532925 ZNF154Q13106 437 aa4.84□□□□□ -1.63
ATPAF1-210ENST00000532925 ZNF266Q14584 549 aa4.84□□□□□ -1.63
ATPAF1-210ENST00000532925 GNMTQ14749 295 aa4.84□□□□□ -1.63
ATPAF1-210ENST00000532925 HERPUD1Q15011 391 aa4.84□□□□□ -1.63
ATPAF1-210ENST00000532925 HMGN3Q15651 99 aa4.84□□□□□ -1.63
ATPAF1-210ENST00000532925 NMSQ5H8A3 153 aa4.84□□□□□ -1.63
ATPAF1-210ENST00000532925 C10orf91Q5T1B1 145 aa4.84□□□□□ -1.63
ATPAF1-210ENST00000532925 ATP1A1-AS1Q5TC04 95 aa4.84□□□□□ -1.63
ATPAF1-210ENST00000532925 OR2T2Q6IF00 324 aa4.84□□□□□ -1.63
ATPAF1-210ENST00000532925 TRAT1Q6PIZ9 186 aa4.84□□□□□ -1.63
ATPAF1-210ENST00000532925 ZNF497Q6ZNH5 498 aa4.84□□□□□ -1.63
ATPAF1-210ENST00000532925 Q6ZS92 163 aa4.84□□□□□ -1.63
ATPAF1-210ENST00000532925 OR8G5Q8NG78 346 aa4.84□□□□□ -1.63
ATPAF1-210ENST00000532925 OR5T2Q8NGG2 359 aa4.84□□□□□ -1.63
ATPAF1-210ENST00000532925 OR10Z1Q8NGY1 313 aa4.84□□□□□ -1.63
ATPAF1-210ENST00000532925 LYPD6BQ8NI32 183 aa4.84□□□□□ -1.63
ATPAF1-210ENST00000532925 NEK7Q8TDX7 302 aa4.84□□□□□ -1.63
ATPAF1-210ENST00000532925 LSM10Q969L4 123 aaKnown RBP4.84□□□□□ -1.63
ATPAF1-210ENST00000532925 LINC00052Q96N35 136 aa4.84□□□□□ -1.63
ATPAF1-210ENST00000532925 ADAT1Q9BUB4 502 aaKnown RBP4.84□□□□□ -1.63
ATPAF1-210ENST00000532925 CXXC4Q9H2H0 198 aa4.84□□□□□ -1.63
ATPAF1-210ENST00000532925 HIPK2Q9H2X6 1198 aa4.84□□□□□ -1.63
ATPAF1-210ENST00000532925 C11orf1Q9H5F2 150 aa4.84□□□□□ -1.63
ATPAF1-210ENST00000532925 NARFLQ9H6Q4 476 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms