RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 ZNF714Q96N38 554 aa9.81□□□□□ -0.84
PTPRK-221ENST00000532331 ZNF586Q9NXT0 402 aa9.81□□□□□ -0.84
PTPRK-221ENST00000532331 ZMIZ1Q9ULJ6 1067 aa9.81□□□□□ -0.84
PTPRK-221ENST00000532331 PMELP40967 661 aa9.81□□□□□ -0.84
PTPRK-221ENST00000532331 MMP16P51512 607 aa9.81□□□□□ -0.84
PTPRK-221ENST00000532331 RHOBP62745 196 aa9.81□□□□□ -0.84
PTPRK-221ENST00000532331 GUK1Q16774 197 aa9.81□□□□□ -0.84
PTPRK-221ENST00000532331 PDZD11Q5EBL8 140 aa9.81□□□□□ -0.84
PTPRK-221ENST00000532331 ZPLD1Q8TCW7 415 aa9.81□□□□□ -0.84
PTPRK-221ENST00000532331 IMMP1LQ96LU5 166 aa9.81□□□□□ -0.84
PTPRK-221ENST00000532331 CHCHD2Q9Y6H1 151 aaPredicted RBP9.81□□□□□ -0.84
PTPRK-221ENST00000532331 SLC25A5P05141 298 aaKnown RBP9.81□□□□□ -0.84
PTPRK-221ENST00000532331 SPP1P10451 314 aa9.81□□□□□ -0.84
PTPRK-221ENST00000532331 LINC00596Q86U02 117 aa9.81□□□□□ -0.84
PTPRK-221ENST00000532331 RNASE6Q93091 150 aaKnown RBP9.81□□□□□ -0.84
PTPRK-221ENST00000532331 R3HDM4Q96D70 268 aa9.81□□□□□ -0.84
PTPRK-221ENST00000532331 MARVELD1Q9BSK0 173 aa9.81□□□□□ -0.84
PTPRK-221ENST00000532331 ZDHHC11Q9H8X9 412 aa9.81□□□□□ -0.84
PTPRK-221ENST00000532331 AHCTF1Q8WYP5 2266 aa9.81□□□□□ -0.84
PTPRK-221ENST00000532331 A0A1W2PNV4 684 aa9.81□□□□□ -0.84
PTPRK-221ENST00000532331 FOXH1O75593 365 aa9.81□□□□□ -0.84
PTPRK-221ENST00000532331 PAX5Q02548 391 aa9.81□□□□□ -0.84
PTPRK-221ENST00000532331 SPINK9Q5DT21 86 aa9.81□□□□□ -0.84
PTPRK-221ENST00000532331 RIPPLY2Q5TAB7 128 aa9.81□□□□□ -0.84
PTPRK-221ENST00000532331 ZNF429Q86V71 674 aa9.81□□□□□ -0.84
PTPRK-221ENST00000532331 CTHRC1Q96CG8 243 aa9.81□□□□□ -0.84
PTPRK-221ENST00000532331 HSD17B10Q99714 261 aaKnown RBP9.81□□□□□ -0.84
PTPRK-221ENST00000532331 FAM103A1Q9BTL3 118 aaKnown RBP9.81□□□□□ -0.84
PTPRK-221ENST00000532331 CHST5Q9GZS9 411 aa9.81□□□□□ -0.84
PTPRK-221ENST00000532331 MRPL22Q9NWU5 206 aaKnown RBP9.81□□□□□ -0.84
PTPRK-221ENST00000532331 SEC16AO15027 2179 aa9.81□□□□□ -0.84
PTPRK-221ENST00000532331 PTP4A3O75365 173 aa9.8□□□□□ -0.84
PTPRK-221ENST00000532331 CA11O75493 328 aa9.8□□□□□ -0.84
PTPRK-221ENST00000532331 AANATQ16613 207 aa9.8□□□□□ -0.84
PTPRK-221ENST00000532331 C2CD4CQ8TF44 421 aa9.8□□□□□ -0.84
PTPRK-221ENST00000532331 ZNF552Q9H707 407 aaPredicted RBP9.8□□□□□ -0.84
PTPRK-221ENST00000532331 IGHV1-69-2A0A0G2JMI3 117 aa9.8□□□□□ -0.84
PTPRK-221ENST00000532331 INHBBP09529 407 aa9.8□□□□□ -0.84
PTPRK-221ENST00000532331 KCNMB1Q16558 191 aa9.8□□□□□ -0.84
PTPRK-221ENST00000532331 CLEC12BQ2HXU8 276 aa9.8□□□□□ -0.84
PTPRK-221ENST00000532331 PIPOXQ9P0Z9 390 aa9.8□□□□□ -0.84
PTPRK-221ENST00000532331 MAP1LC3B2A6NCE7 125 aa9.8□□□□□ -0.84
PTPRK-221ENST00000532331 OPN1MWP04001 364 aa9.8□□□□□ -0.84
PTPRK-221ENST00000532331 OPN1MW2P0DN77 364 aa9.8□□□□□ -0.84
PTPRK-221ENST00000532331 OPN1MW3P0DN78 364 aa9.8□□□□□ -0.84
PTPRK-221ENST00000532331 VWA1Q6PCB0 445 aa9.8□□□□□ -0.84
PTPRK-221ENST00000532331 MAP1LC3BQ9GZQ8 125 aa9.8□□□□□ -0.84
PTPRK-221ENST00000532331 CYB5R1Q9UHQ9 305 aa9.8□□□□□ -0.84
PTPRK-221ENST00000532331 HAX1O00165 279 aa9.8□□□□□ -0.84
PTPRK-221ENST00000532331 TOX4O94842 621 aa9.8□□□□□ -0.84
PTPRK-221ENST00000532331 SFTA3P0C7M3 94 aa9.8□□□□□ -0.84
PTPRK-221ENST00000532331 MMDQ15546 238 aa9.8□□□□□ -0.84
PTPRK-221ENST00000532331 DCAF12L2Q5VW00 463 aa9.8□□□□□ -0.84
PTPRK-221ENST00000532331 OR8G5Q8NG78 346 aa9.8□□□□□ -0.84
PTPRK-221ENST00000532331 MMP26Q9NRE1 261 aa9.8□□□□□ -0.84
PTPRK-221ENST00000532331 OR1A1Q9P1Q5 309 aa9.8□□□□□ -0.84
PTPRK-221ENST00000532331 IL19Q9UHD0 177 aa9.8□□□□□ -0.84
PTPRK-221ENST00000532331 ZNF107Q9UII5 783 aaPredicted RBP9.8□□□□□ -0.84
PTPRK-221ENST00000532331 FAM106CPP0CH98 169 aa9.8□□□□□ -0.84
PTPRK-221ENST00000532331 TPRP12270 2363 aaKnown RBP9.8□□□□□ -0.84
PTPRK-221ENST00000532331 ACSF3Q4G176 576 aaPredicted RBP9.8□□□□□ -0.84
PTPRK-221ENST00000532331 CLLU1Q5K131 121 aa9.8□□□□□ -0.84
PTPRK-221ENST00000532331 KCNK17Q96T54 332 aa9.8□□□□□ -0.84
PTPRK-221ENST00000532331 SH2D2AQ9NP31 389 aa9.8□□□□□ -0.84
PTPRK-221ENST00000532331 VDAC1P21796 283 aa9.79□□□□□ -0.84
PTPRK-221ENST00000532331 CDC34P49427 236 aaPredicted RBP9.79□□□□□ -0.84
PTPRK-221ENST00000532331 IL24Q13007 206 aa9.79□□□□□ -0.84
PTPRK-221ENST00000532331 ECSCRQ19T08 205 aa9.79□□□□□ -0.84
PTPRK-221ENST00000532331 FLYWCH2Q96CP2 140 aaKnown RBP9.79□□□□□ -0.84
PTPRK-221ENST00000532331 NUP214P35658 2090 aaPredicted RBP9.79□□□□□ -0.84
PTPRK-221ENST00000532331 TXNDC12O95881 172 aa9.79□□□□□ -0.84
PTPRK-221ENST00000532331 AESQ08117 197 aa9.79□□□□□ -0.84
PTPRK-221ENST00000532331 ZNF260Q3ZCT1 412 aa9.79□□□□□ -0.84
PTPRK-221ENST00000532331 YAE1D1Q9NRH1 226 aa9.79□□□□□ -0.84
PTPRK-221ENST00000532331 PITPNC1Q9UKF7 332 aa9.79□□□□□ -0.84
PTPRK-221ENST00000532331 IGKV3D-11A0A0A0MRZ8 115 aa9.79□□□□□ -0.84
PTPRK-221ENST00000532331 LINC00271P0C7V0 271 aa9.79□□□□□ -0.84
PTPRK-221ENST00000532331 DAOP14920 347 aa9.79□□□□□ -0.84
PTPRK-221ENST00000532331 HLA-DRB3P79483 266 aa9.79□□□□□ -0.84
PTPRK-221ENST00000532331 DUSP18Q8NEJ0 188 aa9.79□□□□□ -0.84
PTPRK-221ENST00000532331 RNF2Q99496 336 aa9.79□□□□□ -0.84
PTPRK-221ENST00000532331 GOLT1BQ9Y3E0 138 aa9.79□□□□□ -0.84
PTPRK-221ENST00000532331 HILPDAQ9Y5L2 63 aa9.79□□□□□ -0.84
PTPRK-221ENST00000532331 CEACAM21Q3KPI0 293 aa9.79□□□□□ -0.84
PTPRK-221ENST00000532331 SLC25A47Q6Q0C1 308 aa9.79□□□□□ -0.84
PTPRK-221ENST00000532331 WDR31Q8NA23 367 aa9.79□□□□□ -0.84
PTPRK-221ENST00000532331 FAM168AQ92567 244 aa9.79□□□□□ -0.84
PTPRK-221ENST00000532331 RALGAPA2Q2PPJ7 1873 aa9.79□□□□□ -0.84
PTPRK-221ENST00000532331 LOC105371242A0A075B767 164 aa9.78□□□□□ -0.84
PTPRK-221ENST00000532331 PPYP01298 95 aa9.78□□□□□ -0.84
PTPRK-221ENST00000532331 C4orf17Q53FE4 359 aa9.78□□□□□ -0.84
PTPRK-221ENST00000532331 SLC24A4Q8NFF2 622 aa9.78□□□□□ -0.84
PTPRK-221ENST00000532331 RBM38Q9H0Z9 239 aaKnown RBP9.78□□□□□ -0.84
PTPRK-221ENST00000532331 WSB1Q9Y6I7 421 aa9.78□□□□□ -0.84
PTPRK-221ENST00000532331 E9PLN8 166 aa9.78□□□□□ -0.84
PTPRK-221ENST00000532331 MGST3O14880 152 aa9.78□□□□□ -0.84
PTPRK-221ENST00000532331 SYNGR2O43760 224 aa9.78□□□□□ -0.84
PTPRK-221ENST00000532331 LSM11P83369 360 aaKnown RBP eCLIP9.78□□□□□ -0.84
PTPRK-221ENST00000532331 IRF3Q14653 427 aa9.78□□□□□ -0.84
PTPRK-221ENST00000532331 CLEC18BQ6UXF7 455 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms