RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 TMEM160Q9NX00 188 aa13.9□□□□□ -0.18
SF3B2-211ENST00000531041 OPN4Q9UHM6 478 aa13.9□□□□□ -0.18
SF3B2-211ENST00000531041 KBTBD11-OT1A0A1B0GTJ5 212 aa13.9□□□□□ -0.19
SF3B2-211ENST00000531041 TMEM235A6NFC5 223 aa13.9□□□□□ -0.19
SF3B2-211ENST00000531041 ORC5O43913 435 aa13.9□□□□□ -0.19
SF3B2-211ENST00000531041 TOX4O94842 621 aa13.9□□□□□ -0.19
SF3B2-211ENST00000531041 AVPP01185 164 aa13.9□□□□□ -0.19
SF3B2-211ENST00000531041 MRPS15P82914 257 aaKnown RBP13.9□□□□□ -0.19
SF3B2-211ENST00000531041 PITPNAQ00169 270 aa13.9□□□□□ -0.19
SF3B2-211ENST00000531041 ARFRP1Q13795 201 aa13.9□□□□□ -0.19
SF3B2-211ENST00000531041 C6orf183Q5T699 404 aa13.9□□□□□ -0.19
SF3B2-211ENST00000531041 TRAT1Q6PIZ9 186 aa13.9□□□□□ -0.19
SF3B2-211ENST00000531041 ZNF554Q86TJ5 538 aa13.9□□□□□ -0.19
SF3B2-211ENST00000531041 MRGPRDQ8TDS7 321 aa13.9□□□□□ -0.19
SF3B2-211ENST00000531041 UPRTQ96BW1 309 aa13.9□□□□□ -0.19
SF3B2-211ENST00000531041 HDHD3Q9BSH5 251 aaPredicted RBP13.9□□□□□ -0.19
SF3B2-211ENST00000531041 AUNIPQ9H7T9 357 aa13.9□□□□□ -0.19
SF3B2-211ENST00000531041 METTL8Q9H825 291 aaKnown RBP13.9□□□□□ -0.19
SF3B2-211ENST00000531041 ELF5Q9UKW6 265 aaPredicted RBP13.9□□□□□ -0.19
SF3B2-211ENST00000531041 TRAV39A0A0B4J263 110 aa13.89□□□□□ -0.19
SF3B2-211ENST00000531041 RCC1P18754 421 aaPredicted RBP13.89□□□□□ -0.19
SF3B2-211ENST00000531041 PRTN3P24158 256 aa13.89□□□□□ -0.19
SF3B2-211ENST00000531041 MNDAP41218 407 aa13.89□□□□□ -0.19
SF3B2-211ENST00000531041 TAS2R20P59543 309 aa13.89□□□□□ -0.19
SF3B2-211ENST00000531041 C17orf58Q2M2W7 97 aa13.89□□□□□ -0.19
SF3B2-211ENST00000531041 HEPN1Q6WQI6 88 aa13.89□□□□□ -0.19
SF3B2-211ENST00000531041 Q6ZPA2 131 aa13.89□□□□□ -0.19
SF3B2-211ENST00000531041 C1orf229Q6ZS94 237 aaPredicted RBP13.89□□□□□ -0.19
SF3B2-211ENST00000531041 MOB1BQ7L9L4 216 aa13.89□□□□□ -0.19
SF3B2-211ENST00000531041 IZUMO1Q8IYV9 350 aa13.89□□□□□ -0.19
SF3B2-211ENST00000531041 DTX3Q8N9I9 347 aa13.89□□□□□ -0.19
SF3B2-211ENST00000531041 PCGF1Q9BSM1 259 aa13.89□□□□□ -0.19
SF3B2-211ENST00000531041 CHMP1AQ9HD42 196 aaPredicted RBP13.89□□□□□ -0.19
SF3B2-211ENST00000531041 CALYQ9NYX4 217 aa13.89□□□□□ -0.19
SF3B2-211ENST00000531041 EXTL2Q9UBQ6 330 aa13.89□□□□□ -0.19
SF3B2-211ENST00000531041 NPIPB11E5RHQ5 1161 aa13.88□□□□□ -0.19
SF3B2-211ENST00000531041 C15orf65H3BRN8 121 aa13.88□□□□□ -0.19
SF3B2-211ENST00000531041 CLPXO76031 633 aa13.88□□□□□ -0.19
SF3B2-211ENST00000531041 TPPPO94811 219 aa13.88□□□□□ -0.19
SF3B2-211ENST00000531041 HLA-DQB1P01920 261 aa13.88□□□□□ -0.19
SF3B2-211ENST00000531041 TALDO1P37837 337 aa13.88□□□□□ -0.19
SF3B2-211ENST00000531041 GNG2P59768 71 aa13.88□□□□□ -0.19
SF3B2-211ENST00000531041 CNPY1Q3B7I2 92 aa13.88□□□□□ -0.19
SF3B2-211ENST00000531041 CNIH2Q6PI25 160 aa13.88□□□□□ -0.19
SF3B2-211ENST00000531041 VMO1Q7Z5L0 202 aa13.88□□□□□ -0.19
SF3B2-211ENST00000531041 TBX15Q96SF7 602 aa13.88□□□□□ -0.19
SF3B2-211ENST00000531041 Q9N2K0 584 aa13.88□□□□□ -0.19
SF3B2-211ENST00000531041 RAB9BQ9NP90 201 aa13.88□□□□□ -0.19
SF3B2-211ENST00000531041 MGAT4AQ9UM21 535 aa13.88□□□□□ -0.19
SF3B2-211ENST00000531041 HIVEP2P31629 2446 aa13.87□□□□□ -0.19
SF3B2-211ENST00000531041 C12orf77C9JDV5 145 aa13.87□□□□□ -0.19
SF3B2-211ENST00000531041 FCGR3AP08637 254 aa13.87□□□□□ -0.19
SF3B2-211ENST00000531041 IGHV1-8P0DP01 117 aa13.87□□□□□ -0.19
SF3B2-211ENST00000531041 DTYMKP23919 212 aa13.87□□□□□ -0.19
SF3B2-211ENST00000531041 TNFSF8P32971 234 aa13.87□□□□□ -0.19
SF3B2-211ENST00000531041 S100A5P33763 92 aa13.87□□□□□ -0.19
SF3B2-211ENST00000531041 SSTR5P35346 364 aa13.87□□□□□ -0.19
SF3B2-211ENST00000531041 ERVFRD-1P60508 538 aa13.87□□□□□ -0.19
SF3B2-211ENST00000531041 SRSF7Q16629 238 aaKnown RBP eCLIP13.87□□□□□ -0.19
SF3B2-211ENST00000531041 TEX29Q8N6K0 151 aa13.87□□□□□ -0.19
SF3B2-211ENST00000531041 OR10A7Q8NGE5 316 aa13.87□□□□□ -0.19
SF3B2-211ENST00000531041 TNFRSF14Q92956 283 aa13.87□□□□□ -0.19
SF3B2-211ENST00000531041 ARL11Q969Q4 196 aa13.87□□□□□ -0.19
SF3B2-211ENST00000531041 DIRAS2Q96HU8 199 aa13.87□□□□□ -0.19
SF3B2-211ENST00000531041 TAF9BQ9HBM6 251 aa13.87□□□□□ -0.19
SF3B2-211ENST00000531041 KCNIP1Q9NZI2 227 aa13.87□□□□□ -0.19
SF3B2-211ENST00000531041 SONP18583 2426 aaKnown RBP13.86□□□□□ -0.19
SF3B2-211ENST00000531041 SSX5O60225 188 aa13.86□□□□□ -0.19
SF3B2-211ENST00000531041 MMP23AO75900 390 aa13.86□□□□□ -0.19
SF3B2-211ENST00000531041 HMGN3Q15651 99 aa13.86□□□□□ -0.19
SF3B2-211ENST00000531041 FAM120AOSQ5T036 256 aa13.86□□□□□ -0.19
SF3B2-211ENST00000531041 BAIAP2L2Q6UXY1 529 aa13.86□□□□□ -0.19
SF3B2-211ENST00000531041 Q6ZS49 121 aa13.86□□□□□ -0.19
SF3B2-211ENST00000531041 SETD6Q8TBK2 473 aa13.86□□□□□ -0.19
SF3B2-211ENST00000531041 NUDCD2Q8WVJ2 157 aa13.86□□□□□ -0.19
SF3B2-211ENST00000531041 SIRT7Q9NRC8 400 aa13.86□□□□□ -0.19
SF3B2-211ENST00000531041 RABL2AQ9UBK7 228 aaPredicted RBP13.86□□□□□ -0.19
SF3B2-211ENST00000531041 RABL2BQ9UNT1 228 aa13.86□□□□□ -0.19
SF3B2-211ENST00000531041 MRPS7Q9Y2R9 242 aaKnown RBP13.86□□□□□ -0.19
SF3B2-211ENST00000531041 NSD1Q96L73 2696 aaPredicted RBP13.86□□□□□ -0.19
SF3B2-211ENST00000531041 F2RL2O00254 374 aa13.85□□□□□ -0.19
SF3B2-211ENST00000531041 SPINT2O43291 252 aa13.85□□□□□ -0.19
SF3B2-211ENST00000531041 PTHLHP12272 177 aa13.85□□□□□ -0.19
SF3B2-211ENST00000531041 OMGP23515 440 aa13.85□□□□□ -0.19
SF3B2-211ENST00000531041 PRSS3P35030 304 aa13.85□□□□□ -0.19
SF3B2-211ENST00000531041 NCR3LG1Q68D85 454 aa13.85□□□□□ -0.19
SF3B2-211ENST00000531041 OR52W1Q6IF63 320 aa13.85□□□□□ -0.19
SF3B2-211ENST00000531041 Q71RC1 249 aaPredicted RBP13.85□□□□□ -0.19
SF3B2-211ENST00000531041 RFESDQ8TAC1 157 aa13.85□□□□□ -0.19
SF3B2-211ENST00000531041 NANPQ8TBE9 248 aa13.85□□□□□ -0.19
SF3B2-211ENST00000531041 C15orf40Q8WUR7 153 aa13.85□□□□□ -0.19
SF3B2-211ENST00000531041 KIRREL1Q96J84 757 aa13.85□□□□□ -0.19
SF3B2-211ENST00000531041 OCSTAMPQ9BR26 566 aa13.85□□□□□ -0.19
SF3B2-211ENST00000531041 HEXA-AS1Q9H8Q6 139 aa13.85□□□□□ -0.19
SF3B2-211ENST00000531041 IDI2-AS1Q9NZ38 188 aa13.85□□□□□ -0.19
SF3B2-211ENST00000531041 SESN1Q9Y6P5 492 aa13.85□□□□□ -0.19
SF3B2-211ENST00000531041 FSHBP01225 129 aa13.84□□□□□ -0.19
SF3B2-211ENST00000531041 HBZP02008 142 aa13.84□□□□□ -0.19
SF3B2-211ENST00000531041 HOXB4P17483 251 aaPredicted RBP13.84□□□□□ -0.19
SF3B2-211ENST00000531041 HNF1AP20823 631 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms