RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 Q6ZVQ6 151 aa5.2□□□□□ -1.58
CSDE1-213ENST00000530784 VMO1Q7Z5L0 202 aa5.2□□□□□ -1.58
CSDE1-213ENST00000530784 FAM86B1Q8N7N1 296 aa5.2□□□□□ -1.58
CSDE1-213ENST00000530784 ZSCAN4Q8NAM6 433 aaPredicted RBP5.2□□□□□ -1.58
CSDE1-213ENST00000530784 OR52L1Q8NGH7 329 aa5.2□□□□□ -1.58
CSDE1-213ENST00000530784 OR56B2PQ8NGI1 322 aa5.2□□□□□ -1.58
CSDE1-213ENST00000530784 OR2T4Q8NH00 348 aa5.2□□□□□ -1.58
CSDE1-213ENST00000530784 OR8S1Q8NH09 359 aa5.2□□□□□ -1.58
CSDE1-213ENST00000530784 C7orf34Q96L11 122 aa5.2□□□□□ -1.58
CSDE1-213ENST00000530784 COPS4Q9BT78 406 aa5.2□□□□□ -1.58
CSDE1-213ENST00000530784 SRD5A3Q9H8P0 318 aa5.2□□□□□ -1.58
CSDE1-213ENST00000530784 DCAF13Q9NV06 445 aaKnown RBP5.2□□□□□ -1.58
CSDE1-213ENST00000530784 MRPL22Q9NWU5 206 aaKnown RBP5.2□□□□□ -1.58
CSDE1-213ENST00000530784 ONECUT1Q9UBC0 465 aa5.2□□□□□ -1.58
CSDE1-213ENST00000530784 ABCD2Q9UBJ2 740 aa5.2□□□□□ -1.58
CSDE1-213ENST00000530784 KAAG1Q9UBP8 84 aa5.2□□□□□ -1.58
CSDE1-213ENST00000530784 VPREB3Q9UKI3 123 aa5.2□□□□□ -1.58
CSDE1-213ENST00000530784 N6AMT1Q9Y5N5 214 aa5.2□□□□□ -1.58
CSDE1-213ENST00000530784 V9GYQ6 96 aa5.2□□□□□ -1.58
CSDE1-213ENST00000530784 ARHGAP32A7KAX9 2087 aa5.19□□□□□ -1.58
CSDE1-213ENST00000530784 C5orf63A6NC05 138 aa5.19□□□□□ -1.58
CSDE1-213ENST00000530784 TVP23AA6NH52 213 aa5.19□□□□□ -1.58
CSDE1-213ENST00000530784 ZNF732B4DXR9 585 aa5.19□□□□□ -1.58
CSDE1-213ENST00000530784 XRCC2O43543 280 aa5.19□□□□□ -1.58
CSDE1-213ENST00000530784 NDUFB3O43676 98 aa5.19□□□□□ -1.58
CSDE1-213ENST00000530784 CLN5O75503 358 aa5.19□□□□□ -1.58
CSDE1-213ENST00000530784 FCN3O75636 299 aa5.19□□□□□ -1.58
CSDE1-213ENST00000530784 PAHP00439 452 aa5.19□□□□□ -1.58
CSDE1-213ENST00000530784 LHBP01229 141 aa5.19□□□□□ -1.58
CSDE1-213ENST00000530784 SLC2A1P11166 492 aa5.19□□□□□ -1.58
CSDE1-213ENST00000530784 MUC1P15941 1255 aaPredicted RBP5.19□□□□□ -1.58
CSDE1-213ENST00000530784 PYCR1P32322 319 aa5.19□□□□□ -1.58
CSDE1-213ENST00000530784 DDOSTP39656 456 aa5.19□□□□□ -1.58
CSDE1-213ENST00000530784 PRKXP51817 358 aa5.19□□□□□ -1.58
CSDE1-213ENST00000530784 PSME3P61289 254 aa5.19□□□□□ -1.58
CSDE1-213ENST00000530784 TSPAN31Q12999 210 aa5.19□□□□□ -1.58
CSDE1-213ENST00000530784 PCK2Q16822 640 aa5.19□□□□□ -1.58
CSDE1-213ENST00000530784 MICBQ29980 383 aa5.19□□□□□ -1.58
CSDE1-213ENST00000530784 RPL13AP3Q6NVV1 102 aa5.19□□□□□ -1.58
CSDE1-213ENST00000530784 METAP1DQ6UB28 335 aaPredicted RBP5.19□□□□□ -1.58
CSDE1-213ENST00000530784 SLC36A1Q7Z2H8 476 aa5.19□□□□□ -1.58
CSDE1-213ENST00000530784 DCXRQ7Z4W1 244 aa5.19□□□□□ -1.58
CSDE1-213ENST00000530784 ZDHHC21Q8IVQ6 265 aa5.19□□□□□ -1.58
CSDE1-213ENST00000530784 FAM216BQ8N7L0 139 aa5.19□□□□□ -1.58
CSDE1-213ENST00000530784 LY6G5BQ8NDX9 201 aa5.19□□□□□ -1.58
CSDE1-213ENST00000530784 LRRC29Q8WV35 223 aa5.19□□□□□ -1.58
CSDE1-213ENST00000530784 MCUR1Q96AQ8 359 aa5.19□□□□□ -1.58
CSDE1-213ENST00000530784 SLAMF6Q96DU3 332 aa5.19□□□□□ -1.58
CSDE1-213ENST00000530784 PYURFQ96I23 114 aa5.19□□□□□ -1.58
CSDE1-213ENST00000530784 CCL13Q99616 98 aa5.19□□□□□ -1.58
CSDE1-213ENST00000530784 OCR1Q9BZK8 76 aa5.19□□□□□ -1.58
CSDE1-213ENST00000530784 C16orf95Q9H693 158 aa5.19□□□□□ -1.58
CSDE1-213ENST00000530784 FNDC4Q9H6D8 234 aaPredicted RBP5.19□□□□□ -1.58
CSDE1-213ENST00000530784 RNPEPL1Q9HAU8 725 aa5.19□□□□□ -1.58
CSDE1-213ENST00000530784 SIRT7Q9NRC8 400 aa5.19□□□□□ -1.58
CSDE1-213ENST00000530784 CENPMQ9NSP4 180 aa5.19□□□□□ -1.58
CSDE1-213ENST00000530784 ADA2Q9NZK5 511 aa5.19□□□□□ -1.58
CSDE1-213ENST00000530784 ZNRD1Q9P1U0 126 aa5.19□□□□□ -1.58
CSDE1-213ENST00000530784 CDH10Q9Y6N8 788 aa5.19□□□□□ -1.58
CSDE1-213ENST00000530784 COMMD3-BMI1R4GMX3 469 aa5.19□□□□□ -1.58
CSDE1-213ENST00000530784 ZNF816-ZNF321PA0A0X1KG74 233 aa5.18□□□□□ -1.58
CSDE1-213ENST00000530784 A0A1B0GW55 424 aa5.18□□□□□ -1.58
CSDE1-213ENST00000530784 ZNF878C9JN71 531 aa5.18□□□□□ -1.58
CSDE1-213ENST00000530784 NPFFO15130 113 aa5.18□□□□□ -1.58
CSDE1-213ENST00000530784 SEMG1P04279 462 aa5.18□□□□□ -1.58
CSDE1-213ENST00000530784 FABP3P05413 133 aa5.18□□□□□ -1.58
CSDE1-213ENST00000530784 DUX4L2P0CJ85 424 aa5.18□□□□□ -1.58
CSDE1-213ENST00000530784 DUX4L3P0CJ86 424 aa5.18□□□□□ -1.58
CSDE1-213ENST00000530784 DUX4L4P0CJ87 422 aa5.18□□□□□ -1.58
CSDE1-213ENST00000530784 DUX4L5P0CJ88 424 aa5.18□□□□□ -1.58
CSDE1-213ENST00000530784 DUX4L6P0CJ89 424 aa5.18□□□□□ -1.58
CSDE1-213ENST00000530784 DUX4L7P0CJ90 424 aa5.18□□□□□ -1.58
CSDE1-213ENST00000530784 DNAH10OSP0CZ25 163 aa5.18□□□□□ -1.58
CSDE1-213ENST00000530784 PSKH1P11801 424 aa5.18□□□□□ -1.58
CSDE1-213ENST00000530784 H2AFXP16104 143 aaPredicted RBP5.18□□□□□ -1.58
CSDE1-213ENST00000530784 CFL1P23528 166 aaKnown RBP5.18□□□□□ -1.58
CSDE1-213ENST00000530784 HSD11B1P28845 292 aa5.18□□□□□ -1.58
CSDE1-213ENST00000530784 RRM2P31350 389 aa5.18□□□□□ -1.58
CSDE1-213ENST00000530784 FMO3P31513 532 aa5.18□□□□□ -1.58
CSDE1-213ENST00000530784 TGFBR2P37173 567 aa5.18□□□□□ -1.58
CSDE1-213ENST00000530784 NAA10P41227 235 aaPredicted RBP5.18□□□□□ -1.58
CSDE1-213ENST00000530784 GSSP48637 474 aa5.18□□□□□ -1.58
CSDE1-213ENST00000530784 CX3CR1P49238 355 aa5.18□□□□□ -1.58
CSDE1-213ENST00000530784 SRPXP78539 464 aa5.18□□□□□ -1.58
CSDE1-213ENST00000530784 ELF3P78545 371 aaPredicted RBP5.18□□□□□ -1.58
CSDE1-213ENST00000530784 LRRC10Q5BKY1 277 aa5.18□□□□□ -1.58
CSDE1-213ENST00000530784 DUX4L9Q6RFH8 374 aaPredicted RBP5.18□□□□□ -1.58
CSDE1-213ENST00000530784 REG3GQ6UW15 175 aa5.18□□□□□ -1.58
CSDE1-213ENST00000530784 WDR82Q6UXN9 313 aa5.18□□□□□ -1.58
CSDE1-213ENST00000530784 DPY19L4Q7Z388 723 aa5.18□□□□□ -1.58
CSDE1-213ENST00000530784 WDR86Q86TI4 376 aa5.18□□□□□ -1.58
CSDE1-213ENST00000530784 C11orf53Q8IXP5 236 aa5.18□□□□□ -1.58
CSDE1-213ENST00000530784 FGFRL1Q8N441 504 aa5.18□□□□□ -1.58
CSDE1-213ENST00000530784 RNF148Q8N7C7 305 aa5.18□□□□□ -1.58
CSDE1-213ENST00000530784 CYB561A3Q8NBI2 242 aa5.18□□□□□ -1.58
CSDE1-213ENST00000530784 OR1M1Q8NGA1 313 aa5.18□□□□□ -1.58
CSDE1-213ENST00000530784 OR51L1Q8NGJ5 315 aa5.18□□□□□ -1.58
CSDE1-213ENST00000530784 OR9Q1Q8NGQ5 310 aa5.18□□□□□ -1.58
CSDE1-213ENST00000530784 TYMSOSQ8TAI1 123 aa5.18□□□□□ -1.58
CSDE1-213ENST00000530784 GNPDA2Q8TDQ7 276 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms