RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 CCDC32Q9BV29 185 aa8.81□□□□□ -1
SOX6-213ENST00000530378 SSBP3Q9BWW4 388 aaPredicted RBP8.81□□□□□ -1
SOX6-213ENST00000530378 FAM234AQ9H0X4 552 aa8.81□□□□□ -1
SOX6-213ENST00000530378 IGHV3-43A0A0B4J1X8 118 aa8.8□□□□□ -1
SOX6-213ENST00000530378 C12orf77C9JDV5 145 aa8.8□□□□□ -1
SOX6-213ENST00000530378 F5H0A9 414 aaPredicted RBP8.8□□□□□ -1
SOX6-213ENST00000530378 SDCBPO00560 298 aaPredicted RBP8.8□□□□□ -1
SOX6-213ENST00000530378 CD3DP04234 171 aa8.8□□□□□ -1
SOX6-213ENST00000530378 GLAP06280 429 aa8.8□□□□□ -1
SOX6-213ENST00000530378 SCTP09683 121 aa8.8□□□□□ -1
SOX6-213ENST00000530378 GSTT2P0CG29 244 aa8.8□□□□□ -1
SOX6-213ENST00000530378 GSTT2BP0CG30 244 aa8.8□□□□□ -1
SOX6-213ENST00000530378 IGHV3-43DP0DP04 118 aa8.8□□□□□ -1
SOX6-213ENST00000530378 ZFP36P26651 326 aaKnown RBP8.8□□□□□ -1
SOX6-213ENST00000530378 HRH1P35367 487 aa8.8□□□□□ -1
SOX6-213ENST00000530378 KCNJ3P48549 501 aa8.8□□□□□ -1
SOX6-213ENST00000530378 DLX1P56177 255 aa8.8□□□□□ -1
SOX6-213ENST00000530378 ARPC4P59998 168 aa8.8□□□□□ -1
SOX6-213ENST00000530378 ACTBP60709 375 aa8.8□□□□□ -1
SOX6-213ENST00000530378 LMO4P61968 165 aa8.8□□□□□ -1
SOX6-213ENST00000530378 ACTG1P63261 375 aa8.8□□□□□ -1
SOX6-213ENST00000530378 IGSF11Q5DX21 431 aa8.8□□□□□ -1
SOX6-213ENST00000530378 SHEQ5VZ18 495 aa8.8□□□□□ -1
SOX6-213ENST00000530378 SLC35E4Q6ICL7 350 aa8.8□□□□□ -1
SOX6-213ENST00000530378 LRRC75A-AS1Q8N1F1 130 aa8.8□□□□□ -1
SOX6-213ENST00000530378 TOMM5Q8N4H5 51 aa8.8□□□□□ -1
SOX6-213ENST00000530378 BORCS5Q969J3 196 aa8.8□□□□□ -1
SOX6-213ENST00000530378 KIRREL1Q96J84 757 aa8.8□□□□□ -1
SOX6-213ENST00000530378 TINAGL1Q9GZM7 467 aaPredicted RBP8.8□□□□□ -1
SOX6-213ENST00000530378 TAF9BQ9HBM6 251 aa8.8□□□□□ -1
SOX6-213ENST00000530378 ZNF286AQ9HBT8 521 aa8.8□□□□□ -1
SOX6-213ENST00000530378 Q9N2K0 584 aa8.8□□□□□ -1
SOX6-213ENST00000530378 RABL2AQ9UBK7 228 aaPredicted RBP8.8□□□□□ -1
SOX6-213ENST00000530378 RABL2BQ9UNT1 228 aa8.8□□□□□ -1
SOX6-213ENST00000530378 RBMX2Q9Y388 322 aaKnown RBP8.8□□□□□ -1
SOX6-213ENST00000530378 C2CD3Q4AC94 2353 aa8.8□□□□□ -1
SOX6-213ENST00000530378 SULT1C2O00338 296 aa8.8□□□□□ -1
SOX6-213ENST00000530378 BET1O15155 118 aa8.8□□□□□ -1
SOX6-213ENST00000530378 CA11O75493 328 aa8.8□□□□□ -1
SOX6-213ENST00000530378 IGHV3-7P01780 117 aa8.8□□□□□ -1
SOX6-213ENST00000530378 DTYMKP23919 212 aa8.8□□□□□ -1
SOX6-213ENST00000530378 RCVRNP35243 200 aa8.8□□□□□ -1
SOX6-213ENST00000530378 RFX2P48378 723 aa8.8□□□□□ -1
SOX6-213ENST00000530378 DSCR9P59020 149 aa8.8□□□□□ -1
SOX6-213ENST00000530378 HLA-DRB3P79483 266 aa8.8□□□□□ -1
SOX6-213ENST00000530378 CHRFAM7AQ494W8 412 aa8.8□□□□□ -1
SOX6-213ENST00000530378 PRAMEF5Q5TYX0 476 aa8.8□□□□□ -1
SOX6-213ENST00000530378 HOGA1Q86XE5 327 aa8.8□□□□□ -1
SOX6-213ENST00000530378 LYSMD2Q8IV50 215 aa8.8□□□□□ -1
SOX6-213ENST00000530378 OCSTAMPQ9BR26 566 aa8.8□□□□□ -1
SOX6-213ENST00000530378 SEBOXQ9HB31 216 aaPredicted RBP8.8□□□□□ -1
SOX6-213ENST00000530378 MCUBQ9NWR8 336 aa8.8□□□□□ -1
SOX6-213ENST00000530378 TRGV10A0A0A0MS01 117 aa8.79□□□□□ -1
SOX6-213ENST00000530378 KIAA1324LA8MWY0 1029 aaPredicted RBP8.79□□□□□ -1
SOX6-213ENST00000530378 ZNF736B4DX44 427 aaPredicted RBP8.79□□□□□ -1
SOX6-213ENST00000530378 FABP7O15540 132 aa8.79□□□□□ -1
SOX6-213ENST00000530378 FSTL3O95633 263 aa8.79□□□□□ -1
SOX6-213ENST00000530378 USF1P22415 310 aaPredicted RBP8.79□□□□□ -1
SOX6-213ENST00000530378 CBX5P45973 191 aa8.79□□□□□ -1
SOX6-213ENST00000530378 KLF9Q13886 244 aaPredicted RBP8.79□□□□□ -1
SOX6-213ENST00000530378 HERPUD1Q15011 391 aa8.79□□□□□ -1
SOX6-213ENST00000530378 UTF1Q5T230 341 aa8.79□□□□□ -1
SOX6-213ENST00000530378 TMEM200BQ69YZ2 307 aa8.79□□□□□ -1
SOX6-213ENST00000530378 GAPTQ8N292 157 aa8.79□□□□□ -1
SOX6-213ENST00000530378 OR10V1Q8NGI7 309 aa8.79□□□□□ -1
SOX6-213ENST00000530378 OR4C16Q8NGL9 310 aa8.79□□□□□ -1
SOX6-213ENST00000530378 OR56B4Q8NH76 319 aa8.79□□□□□ -1
SOX6-213ENST00000530378 ARL11Q969Q4 196 aa8.79□□□□□ -1
SOX6-213ENST00000530378 RAB39BQ96DA2 213 aa8.79□□□□□ -1
SOX6-213ENST00000530378 EHFQ9NZC4 300 aa8.79□□□□□ -1
SOX6-213ENST00000530378 OR1A1Q9P1Q5 309 aa8.79□□□□□ -1
SOX6-213ENST00000530378 ONECUT1Q9UBC0 465 aa8.79□□□□□ -1
SOX6-213ENST00000530378 ANXA10Q9UJ72 324 aa8.79□□□□□ -1
SOX6-213ENST00000530378 TBC1D24Q9ULP9 559 aa8.79□□□□□ -1
SOX6-213ENST00000530378 OTOGQ6ZRI0 2925 aa8.79□□□□□ -1
SOX6-213ENST00000530378 CSPG4Q6UVK1 2322 aa8.78□□□□□ -1
SOX6-213ENST00000530378 ABCA1O95477 2261 aa8.78□□□□□ -1
SOX6-213ENST00000530378 IGKV1-6A0A0C4DH72 117 aa8.78□□□□□ -1
SOX6-213ENST00000530378 hADV38S2A0JD32 116 aa8.78□□□□□ -1
SOX6-213ENST00000530378 ANKRD20A5PA0PJZ0 165 aa8.78□□□□□ -1
SOX6-213ENST00000530378 H7C1Q1 480 aa8.78□□□□□ -1
SOX6-213ENST00000530378 SMAD7O15105 426 aaKnown RBP8.78□□□□□ -1
SOX6-213ENST00000530378 TPPPO94811 219 aa8.78□□□□□ -1
SOX6-213ENST00000530378 HBZP02008 142 aa8.78□□□□□ -1
SOX6-213ENST00000530378 CSF1P09603 554 aa8.78□□□□□ -1
SOX6-213ENST00000530378 SLC25A16P16260 332 aa8.78□□□□□ -1
SOX6-213ENST00000530378 DCTN2Q13561 401 aaKnown RBP8.78□□□□□ -1
SOX6-213ENST00000530378 GNMTQ14749 295 aa8.78□□□□□ -1
SOX6-213ENST00000530378 ZNF880Q6PDB4 577 aa8.78□□□□□ -1
SOX6-213ENST00000530378 ZNF782Q6ZMW2 699 aaPredicted RBP8.78□□□□□ -1
SOX6-213ENST00000530378 MOB1BQ7L9L4 216 aa8.78□□□□□ -1
SOX6-213ENST00000530378 GLCCI1Q86VQ1 547 aa8.78□□□□□ -1
SOX6-213ENST00000530378 OR5H2Q8NGV7 314 aa8.78□□□□□ -1
SOX6-213ENST00000530378 LEAP2Q969E1 77 aa8.78□□□□□ -1
SOX6-213ENST00000530378 CREB3L1Q96BA8 519 aa8.78□□□□□ -1
SOX6-213ENST00000530378 TMPRSS13Q9BYE2 586 aa8.78□□□□□ -1
SOX6-213ENST00000530378 RIMS4Q9H426 269 aaPredicted RBP8.78□□□□□ -1
SOX6-213ENST00000530378 CALYQ9NYX4 217 aa8.78□□□□□ -1
SOX6-213ENST00000530378 KCNIP1Q9NZI2 227 aa8.78□□□□□ -1
SOX6-213ENST00000530378 SLC23A1Q9UHI7 598 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms