RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 EBNA1BP2Q99848 306 aaKnown RBP2.63□□□□□ -1.99
C11orf88-204ENST00000529661 TSGA10Q9BZW7 698 aa2.63□□□□□ -1.99
C11orf88-204ENST00000529661 DMAC2Q9NW81 257 aa2.63□□□□□ -1.99
C11orf88-204ENST00000529661 FKBP14Q9NWM8 211 aa2.63□□□□□ -1.99
C11orf88-204ENST00000529661 MMACHCQ9Y4U1 282 aa2.63□□□□□ -1.99
C11orf88-204ENST00000529661 MYO10Q9HD67 2058 aa2.63□□□□□ -1.99
C11orf88-204ENST00000529661 LOXHD1Q8IVV2 1947 aa2.63□□□□□ -1.99
C11orf88-204ENST00000529661 CABIN1Q9Y6J0 2220 aa2.62□□□□□ -1.99
C11orf88-204ENST00000529661 IGHV3-49A0A0A0MS15 119 aa2.62□□□□□ -1.99
C11orf88-204ENST00000529661 MYBPHLA2RUH7 354 aa2.62□□□□□ -1.99
C11orf88-204ENST00000529661 ZNF850A8MQ14 1090 aa2.62□□□□□ -1.99
C11orf88-204ENST00000529661 FFAR1O14842 300 aa2.62□□□□□ -1.99
C11orf88-204ENST00000529661 GATBO75879 557 aaKnown RBP2.62□□□□□ -1.99
C11orf88-204ENST00000529661 EPPINO95925 133 aa2.62□□□□□ -1.99
C11orf88-204ENST00000529661 CYB5R3P00387 301 aaPredicted RBP2.62□□□□□ -1.99
C11orf88-204ENST00000529661 CA2P00918 260 aa2.62□□□□□ -1.99
C11orf88-204ENST00000529661 OR4Q2P0C623 313 aa2.62□□□□□ -1.99
C11orf88-204ENST00000529661 CECR9P0C854 216 aa2.62□□□□□ -1.99
C11orf88-204ENST00000529661 SPNP16150 400 aa2.62□□□□□ -1.99
C11orf88-204ENST00000529661 CFL1P23528 166 aaKnown RBP2.62□□□□□ -1.99
C11orf88-204ENST00000529661 IL3RAP26951 378 aa2.62□□□□□ -1.99
C11orf88-204ENST00000529661 GNG10P50151 68 aa2.62□□□□□ -1.99
C11orf88-204ENST00000529661 CCL23P55773 120 aa2.62□□□□□ -1.99
C11orf88-204ENST00000529661 GTF2BQ00403 316 aa2.62□□□□□ -1.99
C11orf88-204ENST00000529661 ZNF616Q08AN1 781 aa2.62□□□□□ -1.99
C11orf88-204ENST00000529661 IHHQ14623 411 aa2.62□□□□□ -1.99
C11orf88-204ENST00000529661 ZNF404Q494X3 552 aa2.62□□□□□ -1.99
C11orf88-204ENST00000529661 ZNF880Q6PDB4 577 aa2.62□□□□□ -1.99
C11orf88-204ENST00000529661 XKRXQ6PP77 449 aa2.62□□□□□ -1.99
C11orf88-204ENST00000529661 CCDC121Q6ZUS5 278 aa2.62□□□□□ -1.99
C11orf88-204ENST00000529661 NIT1Q86X76 327 aa2.62□□□□□ -1.99
C11orf88-204ENST00000529661 LINC00337Q8N6G1 96 aa2.62□□□□□ -1.99
C11orf88-204ENST00000529661 ERMNQ8TAM6 284 aa2.62□□□□□ -1.99
C11orf88-204ENST00000529661 DTD1Q8TEA8 209 aa2.62□□□□□ -1.99
C11orf88-204ENST00000529661 SLC37A2Q8TED4 501 aa2.62□□□□□ -1.99
C11orf88-204ENST00000529661 IMP4Q96G21 291 aaKnown RBP2.62□□□□□ -1.99
C11orf88-204ENST00000529661 FMC1Q96HJ9 113 aa2.62□□□□□ -1.99
C11orf88-204ENST00000529661 PRRT1Q99946 306 aa2.62□□□□□ -1.99
C11orf88-204ENST00000529661 ZNF649Q9BS31 505 aa2.62□□□□□ -1.99
C11orf88-204ENST00000529661 FBXL15Q9H469 300 aa2.62□□□□□ -1.99
C11orf88-204ENST00000529661 UBQLN4Q9NRR5 601 aa2.62□□□□□ -1.99
C11orf88-204ENST00000529661 PAQR5Q9NXK6 330 aaPredicted RBP2.62□□□□□ -1.99
C11orf88-204ENST00000529661 C21orf62Q9NYP8 219 aa2.62□□□□□ -1.99
C11orf88-204ENST00000529661 TAS2R5Q9NYW4 299 aa2.62□□□□□ -1.99
C11orf88-204ENST00000529661 ALG5Q9Y673 324 aa2.62□□□□□ -1.99
C11orf88-204ENST00000529661 CLUHO75153 1309 aa2.62□□□□□ -1.99
C11orf88-204ENST00000529661 DNMT1P26358 1616 aaKnown RBP2.61□□□□□ -1.99
C11orf88-204ENST00000529661 COL27A1Q8IZC6 1860 aaPredicted RBP2.61□□□□□ -1.99
C11orf88-204ENST00000529661 TEX50A0A1B0GTY4 177 aa2.61□□□□□ -1.99
C11orf88-204ENST00000529661 LOC389332A0A1B0GUA5 103 aa2.61□□□□□ -1.99
C11orf88-204ENST00000529661 C7orf66A4D0T2 115 aa2.61□□□□□ -1.99
C11orf88-204ENST00000529661 COLCA2A8K830 154 aa2.61□□□□□ -1.99
C11orf88-204ENST00000529661 TMEM238C9JI98 176 aa2.61□□□□□ -1.99
C11orf88-204ENST00000529661 C8orf87E5RJ46 101 aa2.61□□□□□ -1.99
C11orf88-204ENST00000529661 H3BQV1 296 aa2.61□□□□□ -1.99
C11orf88-204ENST00000529661 RPSAP08865 295 aaKnown RBP2.61□□□□□ -1.99
C11orf88-204ENST00000529661 OR4E1P0C645 316 aa2.61□□□□□ -1.99
C11orf88-204ENST00000529661 ALOX5APP20292 161 aa2.61□□□□□ -1.99
C11orf88-204ENST00000529661 M6PRP20645 277 aa2.61□□□□□ -1.99
C11orf88-204ENST00000529661 MIPP30301 263 aa2.61□□□□□ -1.99
C11orf88-204ENST00000529661 AGTR1P30556 359 aa2.61□□□□□ -1.99
C11orf88-204ENST00000529661 PMELP40967 661 aa2.61□□□□□ -1.99
C11orf88-204ENST00000529661 SULT1A1P50225 295 aa2.61□□□□□ -1.99
C11orf88-204ENST00000529661 SULT1A2P50226 295 aa2.61□□□□□ -1.99
C11orf88-204ENST00000529661 SMAGPQ0VAQ4 97 aa2.61□□□□□ -1.99
C11orf88-204ENST00000529661 ADIGQ0VDE8 80 aa2.61□□□□□ -1.99
C11orf88-204ENST00000529661 PPP1R1AQ13522 171 aa2.61□□□□□ -1.99
C11orf88-204ENST00000529661 PAFAH1B3Q15102 231 aaKnown RBP2.61□□□□□ -1.99
C11orf88-204ENST00000529661 SPA17Q15506 151 aa2.61□□□□□ -1.99
C11orf88-204ENST00000529661 FAM131AQ6UXB0 335 aa2.61□□□□□ -1.99
C11orf88-204ENST00000529661 GID4Q8IVV7 300 aa2.61□□□□□ -1.99
C11orf88-204ENST00000529661 SLC35G3Q8N808 338 aa2.61□□□□□ -1.99
C11orf88-204ENST00000529661 SPANXA2-OT1Q8N9U9 137 aa2.61□□□□□ -1.99
C11orf88-204ENST00000529661 OR2M7Q8NG81 312 aa2.61□□□□□ -1.99
C11orf88-204ENST00000529661 AP3S1Q92572 193 aa2.61□□□□□ -1.99
C11orf88-204ENST00000529661 CDX2Q99626 313 aaPredicted RBP2.61□□□□□ -1.99
C11orf88-204ENST00000529661 EBPLQ9BY08 206 aa2.61□□□□□ -1.99
C11orf88-204ENST00000529661 CHST5Q9GZS9 411 aa2.61□□□□□ -1.99
C11orf88-204ENST00000529661 SLC25A31Q9H0C2 315 aa2.61□□□□□ -1.99
C11orf88-204ENST00000529661 POLR1DQ9Y2S0 133 aa2.61□□□□□ -1.99
C11orf88-204ENST00000529661 ARL2BPQ9Y2Y0 163 aa2.61□□□□□ -1.99
C11orf88-204ENST00000529661 INSIG2Q9Y5U4 225 aa2.61□□□□□ -1.99
C11orf88-204ENST00000529661 ARL5AQ9Y689 179 aa2.61□□□□□ -1.99
C11orf88-204ENST00000529661 ENPP4Q9Y6X5 453 aa2.61□□□□□ -1.99
C11orf88-204ENST00000529661 V9GYQ6 96 aa2.61□□□□□ -1.99
C11orf88-204ENST00000529661 MYO5BQ9ULV0 1848 aa2.61□□□□□ -1.99
C11orf88-204ENST00000529661 PTPRKQ15262 1439 aa2.6□□□□□ -1.99
C11orf88-204ENST00000529661 NCOA1Q15788 1441 aa2.6□□□□□ -1.99
C11orf88-204ENST00000529661 CD300LBA8K4G0 201 aa2.6□□□□□ -1.99
C11orf88-204ENST00000529661 PGRMC1O00264 195 aaKnown RBP2.6□□□□□ -1.99
C11orf88-204ENST00000529661 MFNGO00587 321 aa2.6□□□□□ -1.99
C11orf88-204ENST00000529661 SLC37A4O43826 429 aa2.6□□□□□ -1.99
C11orf88-204ENST00000529661 DHRS3O75911 302 aa2.6□□□□□ -1.99
C11orf88-204ENST00000529661 SERPINA1P01009 418 aa2.6□□□□□ -1.99
C11orf88-204ENST00000529661 FABP1P07148 127 aa2.6□□□□□ -1.99
C11orf88-204ENST00000529661 LINC00614P0C842 121 aa2.6□□□□□ -1.99
C11orf88-204ENST00000529661 PRTN3P24158 256 aa2.6□□□□□ -1.99
C11orf88-204ENST00000529661 ELK4P28324 431 aa2.6□□□□□ -1.99
C11orf88-204ENST00000529661 ACOT2P49753 483 aa2.6□□□□□ -1.99
C11orf88-204ENST00000529661 CMC4P56277 68 aaPredicted RBP2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms