RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 SNRPCP09234 159 aaKnown RBP7.09□□□□□ -1.27
CTNND1-220ENST00000529526 ECSCRQ19T08 205 aa7.09□□□□□ -1.27
CTNND1-220ENST00000529526 C10orf113Q5VZT2 155 aa7.09□□□□□ -1.27
CTNND1-220ENST00000529526 SIGIRRQ6IA17 410 aa7.09□□□□□ -1.27
CTNND1-220ENST00000529526 MRPL54Q6P161 138 aaKnown RBP7.09□□□□□ -1.27
CTNND1-220ENST00000529526 VWA1Q6PCB0 445 aa7.09□□□□□ -1.27
CTNND1-220ENST00000529526 ZNF501Q96CX3 271 aaPredicted RBP7.09□□□□□ -1.27
CTNND1-220ENST00000529526 MS4A7Q9GZW8 240 aaPredicted RBP7.09□□□□□ -1.27
CTNND1-220ENST00000529526 LPAR5Q9H1C0 372 aa7.09□□□□□ -1.27
CTNND1-220ENST00000529526 OPN4Q9UHM6 478 aa7.09□□□□□ -1.27
CTNND1-220ENST00000529526 INSIG2Q9Y5U4 225 aa7.09□□□□□ -1.27
CTNND1-220ENST00000529526 IGHV1-45A0A0A0MS14 117 aa7.09□□□□□ -1.27
CTNND1-220ENST00000529526 SRSF10O75494 262 aaKnown RBP7.09□□□□□ -1.27
CTNND1-220ENST00000529526 TUSC1Q2TAM9 212 aa7.09□□□□□ -1.27
CTNND1-220ENST00000529526 VSTM2AQ8TAG5 236 aa7.09□□□□□ -1.27
CTNND1-220ENST00000529526 ADAMTS17Q8TE56 1095 aa7.09□□□□□ -1.27
CTNND1-220ENST00000529526 GMPPAQ96IJ6 420 aaPredicted RBP7.09□□□□□ -1.27
CTNND1-220ENST00000529526 WFDC6Q9BQY6 131 aa7.09□□□□□ -1.27
CTNND1-220ENST00000529526 Q9N2K0 584 aa7.09□□□□□ -1.27
CTNND1-220ENST00000529526 TMEM167BQ9NRX6 74 aa7.09□□□□□ -1.27
CTNND1-220ENST00000529526 A0A0J9YW62 118 aa7.09□□□□□ -1.28
CTNND1-220ENST00000529526 ORM1P02763 201 aa7.09□□□□□ -1.28
CTNND1-220ENST00000529526 OR5A2Q8NGI9 324 aa7.09□□□□□ -1.28
CTNND1-220ENST00000529526 TMUB1Q9BVT8 246 aa7.09□□□□□ -1.28
CTNND1-220ENST00000529526 WDR54Q9H977 334 aa7.09□□□□□ -1.28
CTNND1-220ENST00000529526 PRSS50Q9UI38 385 aa7.09□□□□□ -1.28
CTNND1-220ENST00000529526 LTBP4Q8N2S1 1624 aa7.08□□□□□ -1.28
CTNND1-220ENST00000529526 FAM157CP0CG43 387 aa7.08□□□□□ -1.28
CTNND1-220ENST00000529526 VDAC1P21796 283 aa7.08□□□□□ -1.28
CTNND1-220ENST00000529526 TMEM183BQ1AE95 376 aa7.08□□□□□ -1.28
CTNND1-220ENST00000529526 SOSTQ9BQB4 213 aa7.08□□□□□ -1.28
CTNND1-220ENST00000529526 COL4A5P29400 1685 aa7.08□□□□□ -1.28
CTNND1-220ENST00000529526 UBR3Q6ZT12 1888 aa7.08□□□□□ -1.28
CTNND1-220ENST00000529526 CCL21O00585 134 aa7.08□□□□□ -1.28
CTNND1-220ENST00000529526 LMX1BO60663 402 aa7.08□□□□□ -1.28
CTNND1-220ENST00000529526 RPL29P47914 159 aaKnown RBP7.08□□□□□ -1.28
CTNND1-220ENST00000529526 PSG4Q00888 419 aa7.08□□□□□ -1.28
CTNND1-220ENST00000529526 OR10G8Q8NGN5 311 aa7.08□□□□□ -1.28
CTNND1-220ENST00000529526 LILRB1Q8NHL6 650 aaPredicted RBP7.08□□□□□ -1.28
CTNND1-220ENST00000529526 RAB33BQ9H082 229 aa7.08□□□□□ -1.28
CTNND1-220ENST00000529526 SLC25A10Q9UBX3 287 aaPredicted RBP7.08□□□□□ -1.28
CTNND1-220ENST00000529526 OR51B2Q9Y5P1 312 aa7.08□□□□□ -1.28
CTNND1-220ENST00000529526 KIAA0100Q14667 2235 aaKnown RBP7.08□□□□□ -1.28
CTNND1-220ENST00000529526 MIA3Q5JRA6 1907 aa7.08□□□□□ -1.28
CTNND1-220ENST00000529526 TMEM218A2RU14 115 aa7.08□□□□□ -1.28
CTNND1-220ENST00000529526 SNCGO76070 127 aa7.08□□□□□ -1.28
CTNND1-220ENST00000529526 MGPP08493 103 aa7.08□□□□□ -1.28
CTNND1-220ENST00000529526 ASAH2BP0C7U1 165 aa7.08□□□□□ -1.28
CTNND1-220ENST00000529526 GZMHP20718 246 aa7.08□□□□□ -1.28
CTNND1-220ENST00000529526 SULT1A1P50225 295 aa7.08□□□□□ -1.28
CTNND1-220ENST00000529526 RBM11P57052 281 aaKnown RBP7.08□□□□□ -1.28
CTNND1-220ENST00000529526 GGTLC2Q14390 218 aa7.08□□□□□ -1.28
CTNND1-220ENST00000529526 OR4A4PQ8NGN8 299 aa7.08□□□□□ -1.28
CTNND1-220ENST00000529526 OR2T10Q8NGZ9 312 aa7.08□□□□□ -1.28
CTNND1-220ENST00000529526 CYB5R1Q9UHQ9 305 aa7.08□□□□□ -1.28
CTNND1-220ENST00000529526 P01737 135 aa7.08□□□□□ -1.28
CTNND1-220ENST00000529526 RPL7P18124 248 aaKnown RBP7.08□□□□□ -1.28
CTNND1-220ENST00000529526 CD40P25942 277 aa7.08□□□□□ -1.28
CTNND1-220ENST00000529526 CCKARP32238 428 aa7.08□□□□□ -1.28
CTNND1-220ENST00000529526 BRS3P32247 399 aa7.08□□□□□ -1.28
CTNND1-220ENST00000529526 EIF4EBP2Q13542 120 aaPredicted RBP7.08□□□□□ -1.28
CTNND1-220ENST00000529526 IGSF11Q5DX21 431 aa7.08□□□□□ -1.28
CTNND1-220ENST00000529526 WDR73Q6P4I2 378 aa7.08□□□□□ -1.28
CTNND1-220ENST00000529526 INO80CQ6PI98 192 aaPredicted RBP7.08□□□□□ -1.28
CTNND1-220ENST00000529526 C19orf35Q6ZS72 473 aa7.08□□□□□ -1.28
CTNND1-220ENST00000529526 EAF1Q96JC9 268 aaPredicted RBP7.08□□□□□ -1.28
CTNND1-220ENST00000529526 PCGF1Q9BSM1 259 aa7.08□□□□□ -1.28
CTNND1-220ENST00000529526 TRAF4Q9BUZ4 470 aaPredicted RBP7.08□□□□□ -1.28
CTNND1-220ENST00000529526 HSF4Q9ULV5 492 aa7.08□□□□□ -1.28
CTNND1-220ENST00000529526 COL24A1Q17RW2 1714 aa7.08□□□□□ -1.28
CTNND1-220ENST00000529526 SCN3AQ9NY46 2000 aa7.08□□□□□ -1.28
CTNND1-220ENST00000529526 SHANK3Q9BYB0 1731 aa7.08□□□□□ -1.28
CTNND1-220ENST00000529526 TMEM210A6NLX4 147 aa7.07□□□□□ -1.28
CTNND1-220ENST00000529526 SYNGR1O43759 233 aa7.07□□□□□ -1.28
CTNND1-220ENST00000529526 CTSBP07858 339 aa7.07□□□□□ -1.28
CTNND1-220ENST00000529526 ZNF250P15622 560 aa7.07□□□□□ -1.28
CTNND1-220ENST00000529526 CCL8P80075 99 aa7.07□□□□□ -1.28
CTNND1-220ENST00000529526 FUT5Q11128 374 aa7.07□□□□□ -1.28
CTNND1-220ENST00000529526 TMEM255AQ5JRV8 349 aa7.07□□□□□ -1.28
CTNND1-220ENST00000529526 ASCL5Q7RTU5 278 aa7.07□□□□□ -1.28
CTNND1-220ENST00000529526 ZNF441Q8N8Z8 693 aa7.07□□□□□ -1.28
CTNND1-220ENST00000529526 SNX22Q96L94 193 aa7.07□□□□□ -1.28
CTNND1-220ENST00000529526 PGLYRP3Q96LB9 341 aa7.07□□□□□ -1.28
CTNND1-220ENST00000529526 QSER1Q2KHR3 1735 aa7.07□□□□□ -1.28
CTNND1-220ENST00000529526 KIF13BQ9NQT8 1826 aa7.07□□□□□ -1.28
CTNND1-220ENST00000529526 TMSB15BA0A087X1C1 80 aa7.07□□□□□ -1.28
CTNND1-220ENST00000529526 C16orf97H3BN30 126 aa7.07□□□□□ -1.28
CTNND1-220ENST00000529526 CLDN14O95500 239 aa7.07□□□□□ -1.28
CTNND1-220ENST00000529526 FCGR3AP08637 254 aa7.07□□□□□ -1.28
CTNND1-220ENST00000529526 FAM87AP0C7U9 286 aa7.07□□□□□ -1.28
CTNND1-220ENST00000529526 CEBPDP49716 269 aaPredicted RBP7.07□□□□□ -1.28
CTNND1-220ENST00000529526 FDX2Q6P4F2 183 aa7.07□□□□□ -1.28
CTNND1-220ENST00000529526 OR5R1Q8NH85 324 aa7.07□□□□□ -1.28
CTNND1-220ENST00000529526 SP7Q8TDD2 431 aaPredicted RBP7.07□□□□□ -1.28
CTNND1-220ENST00000529526 FAM222BQ8WU58 562 aa7.07□□□□□ -1.28
CTNND1-220ENST00000529526 ANAPC16Q96DE5 110 aa7.07□□□□□ -1.28
CTNND1-220ENST00000529526 MS4A3Q96HJ5 214 aa7.07□□□□□ -1.28
CTNND1-220ENST00000529526 IFT22Q9H7X7 185 aa7.07□□□□□ -1.28
CTNND1-220ENST00000529526 VAX2Q9UIW0 290 aa7.07□□□□□ -1.28
CTNND1-220ENST00000529526 ZNF638Q14966 1978 aaKnown RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms