RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 C16orf97H3BN30 126 aa12.47□□□□□ -0.41
ECHDC1-220ENST00000528402 DEDDO75618 318 aa12.47□□□□□ -0.41
ECHDC1-220ENST00000528402 SPDEFO95238 335 aa12.47□□□□□ -0.41
ECHDC1-220ENST00000528402 UCP1P25874 307 aa12.47□□□□□ -0.41
ECHDC1-220ENST00000528402 LUMP51884 338 aaPredicted RBP12.47□□□□□ -0.41
ECHDC1-220ENST00000528402 S100A10P60903 97 aa12.47□□□□□ -0.41
ECHDC1-220ENST00000528402 SP6Q3SY56 376 aa12.47□□□□□ -0.41
ECHDC1-220ENST00000528402 C6orf183Q5T699 404 aa12.47□□□□□ -0.41
ECHDC1-220ENST00000528402 EIF5AL1Q6IS14 154 aaKnown RBP12.47□□□□□ -0.41
ECHDC1-220ENST00000528402 ZNF695Q8IW36 515 aa12.47□□□□□ -0.41
ECHDC1-220ENST00000528402 RPRMLQ8N4K4 120 aa12.47□□□□□ -0.41
ECHDC1-220ENST00000528402 Q8NA96 180 aa12.47□□□□□ -0.41
ECHDC1-220ENST00000528402 ZBTB34Q8NCN2 500 aa12.47□□□□□ -0.41
ECHDC1-220ENST00000528402 PLPPR1Q8TBJ4 325 aa12.47□□□□□ -0.41
ECHDC1-220ENST00000528402 TOLLIPQ9H0E2 274 aa12.47□□□□□ -0.41
ECHDC1-220ENST00000528402 DNTTIP1Q9H147 329 aa12.47□□□□□ -0.41
ECHDC1-220ENST00000528402 LUZP4Q9P127 313 aa12.47□□□□□ -0.41
ECHDC1-220ENST00000528402 NSG2Q9Y328 171 aa12.47□□□□□ -0.41
ECHDC1-220ENST00000528402 OOEPA6NGQ2 149 aa12.46□□□□□ -0.41
ECHDC1-220ENST00000528402 H0Y980 276 aa12.46□□□□□ -0.41
ECHDC1-220ENST00000528402 HEXAP06865 529 aa12.46□□□□□ -0.41
ECHDC1-220ENST00000528402 NMBP08949 121 aa12.46□□□□□ -0.41
ECHDC1-220ENST00000528402 RCC1P18754 421 aaPredicted RBP12.46□□□□□ -0.41
ECHDC1-220ENST00000528402 PTAFRP25105 342 aa12.46□□□□□ -0.41
ECHDC1-220ENST00000528402 MSMO1Q15800 293 aa12.46□□□□□ -0.41
ECHDC1-220ENST00000528402 GPR157Q5UAW9 335 aa12.46□□□□□ -0.41
ECHDC1-220ENST00000528402 ZNF818PQ6ZRF7 136 aa12.46□□□□□ -0.41
ECHDC1-220ENST00000528402 BAP18Q8IXM2 172 aa12.46□□□□□ -0.41
ECHDC1-220ENST00000528402 FAM71E2Q8N5Q1 922 aa12.46□□□□□ -0.41
ECHDC1-220ENST00000528402 NUP37Q8NFH4 326 aa12.46□□□□□ -0.41
ECHDC1-220ENST00000528402 OR10V1Q8NGI7 309 aa12.46□□□□□ -0.41
ECHDC1-220ENST00000528402 OR5D13Q8NGL4 314 aa12.46□□□□□ -0.41
ECHDC1-220ENST00000528402 OR11L1Q8NGX0 322 aa12.46□□□□□ -0.41
ECHDC1-220ENST00000528402 OR1S1Q8NH92 325 aa12.46□□□□□ -0.41
ECHDC1-220ENST00000528402 ANGPTL6Q8NI99 470 aa12.46□□□□□ -0.41
ECHDC1-220ENST00000528402 FAM216AQ8WUB2 273 aa12.46□□□□□ -0.41
ECHDC1-220ENST00000528402 ERGIC1Q969X5 290 aa12.46□□□□□ -0.41
ECHDC1-220ENST00000528402 MSL2Q9HCI7 577 aa12.46□□□□□ -0.41
ECHDC1-220ENST00000528402 SESN1Q9Y6P5 492 aa12.46□□□□□ -0.41
ECHDC1-220ENST00000528402 A0A0G2JNJ9 132 aa12.45□□□□□ -0.42
ECHDC1-220ENST00000528402 CLEC18AA5D8T8 446 aa12.45□□□□□ -0.42
ECHDC1-220ENST00000528402 K7EPK0 472 aa12.45□□□□□ -0.42
ECHDC1-220ENST00000528402 ST8SIA3O43173 380 aa12.45□□□□□ -0.42
ECHDC1-220ENST00000528402 PGLYRP1O75594 196 aaPredicted RBP12.45□□□□□ -0.42
ECHDC1-220ENST00000528402 ZNF205O95201 554 aa12.45□□□□□ -0.42
ECHDC1-220ENST00000528402 BMP5P22003 454 aa12.45□□□□□ -0.42
ECHDC1-220ENST00000528402 SNTB1Q13884 538 aaKnown RBP12.45□□□□□ -0.42
ECHDC1-220ENST00000528402 TMEM268Q5VZI3 342 aa12.45□□□□□ -0.42
ECHDC1-220ENST00000528402 TMEM108Q6UXF1 575 aa12.45□□□□□ -0.42
ECHDC1-220ENST00000528402 LYZL2Q7Z4W2 148 aa12.45□□□□□ -0.42
ECHDC1-220ENST00000528402 CLEC18CQ8NCF0 446 aa12.45□□□□□ -0.42
ECHDC1-220ENST00000528402 OR2Z1Q8NG97 314 aa12.45□□□□□ -0.42
ECHDC1-220ENST00000528402 LURAP1Q96LR2 239 aa12.45□□□□□ -0.42
ECHDC1-220ENST00000528402 TP53RKQ96S44 253 aa12.45□□□□□ -0.42
ECHDC1-220ENST00000528402 CCL28Q9NRJ3 127 aa12.45□□□□□ -0.42
ECHDC1-220ENST00000528402 OR5AC2Q9NZP5 309 aa12.45□□□□□ -0.42
ECHDC1-220ENST00000528402 JKAMPQ9P055 326 aa12.45□□□□□ -0.42
ECHDC1-220ENST00000528402 Q9UFV3 132 aa12.45□□□□□ -0.42
ECHDC1-220ENST00000528402 OR14J1Q9UGF5 321 aa12.45□□□□□ -0.42
ECHDC1-220ENST00000528402 DUSP13Q9UII6 198 aa12.45□□□□□ -0.42
ECHDC1-220ENST00000528402 ERRFI1Q9UJM3 462 aaPredicted RBP12.45□□□□□ -0.42
ECHDC1-220ENST00000528402 FREM2Q5SZK8 3169 aa12.45□□□□□ -0.42
ECHDC1-220ENST00000528402 hCG_1807616A0A1W2PRN6 198 aa12.45□□□□□ -0.42
ECHDC1-220ENST00000528402 RNF212BA8MTL3 300 aa12.45□□□□□ -0.42
ECHDC1-220ENST00000528402 VSTM5A8MXK1 200 aa12.45□□□□□ -0.42
ECHDC1-220ENST00000528402 SRRM5B3KS81 715 aa12.45□□□□□ -0.42
ECHDC1-220ENST00000528402 HSPA12AO43301 675 aa12.45□□□□□ -0.42
ECHDC1-220ENST00000528402 SLC25A6P12236 298 aa12.45□□□□□ -0.42
ECHDC1-220ENST00000528402 VDAC1P21796 283 aa12.45□□□□□ -0.42
ECHDC1-220ENST00000528402 TNFSF4P23510 183 aa12.45□□□□□ -0.42
ECHDC1-220ENST00000528402 F2RP25116 425 aa12.45□□□□□ -0.42
ECHDC1-220ENST00000528402 CD40P25942 277 aa12.45□□□□□ -0.42
ECHDC1-220ENST00000528402 RPL12P30050 165 aaKnown RBP12.45□□□□□ -0.42
ECHDC1-220ENST00000528402 GATA4P43694 442 aa12.45□□□□□ -0.42
ECHDC1-220ENST00000528402 P2RY1P47900 373 aa12.45□□□□□ -0.42
ECHDC1-220ENST00000528402 FAM27E3Q08E93 113 aa12.45□□□□□ -0.42
ECHDC1-220ENST00000528402 GNMTQ14749 295 aa12.45□□□□□ -0.42
ECHDC1-220ENST00000528402 BEX5Q5H9J7 111 aa12.45□□□□□ -0.42
ECHDC1-220ENST00000528402 PRAMEF6Q5VXH4 476 aa12.45□□□□□ -0.42
ECHDC1-220ENST00000528402 SELENOHQ8IZQ5 122 aaKnown RBP12.45□□□□□ -0.42
ECHDC1-220ENST00000528402 EIF4E3Q8N5X7 224 aaKnown RBP12.45□□□□□ -0.42
ECHDC1-220ENST00000528402 TMEM171Q8WVE6 324 aa12.45□□□□□ -0.42
ECHDC1-220ENST00000528402 RBPMSQ93062 196 aaKnown RBP12.45□□□□□ -0.42
ECHDC1-220ENST00000528402 GALMQ96C23 342 aa12.45□□□□□ -0.42
ECHDC1-220ENST00000528402 RRNAD1Q96FB5 475 aaKnown RBP12.45□□□□□ -0.42
ECHDC1-220ENST00000528402 NCOR1P1Q9H4R4 102 aa12.45□□□□□ -0.42
ECHDC1-220ENST00000528402 TAF9BQ9HBM6 251 aa12.45□□□□□ -0.42
ECHDC1-220ENST00000528402 ZC4H2Q9NQZ6 224 aa12.45□□□□□ -0.42
ECHDC1-220ENST00000528402 ZDHHC8Q9ULC8 765 aa12.45□□□□□ -0.42
ECHDC1-220ENST00000528402 FZR1Q9UM11 496 aa12.45□□□□□ -0.42
ECHDC1-220ENST00000528402 IGKV1D-13A0A0B4J2D9 117 aa12.44□□□□□ -0.42
ECHDC1-220ENST00000528402 HSD17B6O14756 317 aa12.44□□□□□ -0.42
ECHDC1-220ENST00000528402 JTBO76095 146 aa12.44□□□□□ -0.42
ECHDC1-220ENST00000528402 GAPDHP04406 335 aaKnown RBP12.44□□□□□ -0.42
ECHDC1-220ENST00000528402 IGKV1-13P0DP09 117 aa12.44□□□□□ -0.42
ECHDC1-220ENST00000528402 HKR1P10072 659 aa12.44□□□□□ -0.42
ECHDC1-220ENST00000528402 MMP9P14780 707 aa12.44□□□□□ -0.42
ECHDC1-220ENST00000528402 PVALBP20472 110 aaPredicted RBP12.44□□□□□ -0.42
ECHDC1-220ENST00000528402 IGFBP7Q16270 282 aa12.44□□□□□ -0.42
ECHDC1-220ENST00000528402 AANATQ16613 207 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms