RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 SLC35A1P78382 337 aa4.15□□□□□ -1.75
PCF11-202ENST00000528336 SLC10A7Q0GE19 358 aa4.15□□□□□ -1.75
PCF11-202ENST00000528336 INCA1Q0VD86 236 aa4.15□□□□□ -1.75
PCF11-202ENST00000528336 OR1Q1Q15612 314 aa4.15□□□□□ -1.75
PCF11-202ENST00000528336 LRRC75BQ2VPJ9 315 aa4.15□□□□□ -1.75
PCF11-202ENST00000528336 PAGE3Q5JUK9 113 aa4.15□□□□□ -1.75
PCF11-202ENST00000528336 BRMS1LQ5PSV4 323 aa4.15□□□□□ -1.75
PCF11-202ENST00000528336 SYT6Q5T7P8 510 aaPredicted RBP4.15□□□□□ -1.75
PCF11-202ENST00000528336 HES5Q5TA89 166 aa4.15□□□□□ -1.75
PCF11-202ENST00000528336 UFSP1Q6NVU6 142 aa4.15□□□□□ -1.75
PCF11-202ENST00000528336 Q6ZVH6 145 aa4.15□□□□□ -1.75
PCF11-202ENST00000528336 C17orf82Q86X59 251 aaPredicted RBP4.15□□□□□ -1.75
PCF11-202ENST00000528336 OR11H1Q8NG94 326 aa4.15□□□□□ -1.75
PCF11-202ENST00000528336 OR51G1Q8NGK1 321 aa4.15□□□□□ -1.75
PCF11-202ENST00000528336 OR11H2Q8NH07 326 aa4.15□□□□□ -1.75
PCF11-202ENST00000528336 OR51E1Q8TCB6 317 aa4.15□□□□□ -1.75
PCF11-202ENST00000528336 ASB13Q8WXK3 278 aa4.15□□□□□ -1.75
PCF11-202ENST00000528336 TMEM230Q96A57 120 aa4.15□□□□□ -1.75
PCF11-202ENST00000528336 CLDN23Q96B33 292 aa4.15□□□□□ -1.75
PCF11-202ENST00000528336 VSIG2Q96IQ7 327 aa4.15□□□□□ -1.75
PCF11-202ENST00000528336 FAM19A4Q96LR4 140 aa4.15□□□□□ -1.75
PCF11-202ENST00000528336 PKMYT1Q99640 499 aa4.15□□□□□ -1.75
PCF11-202ENST00000528336 FAM107BQ9H098 131 aa4.15□□□□□ -1.75
PCF11-202ENST00000528336 METTL17Q9H7H0 456 aaPredicted RBP4.15□□□□□ -1.75
PCF11-202ENST00000528336 SH2D2AQ9NP31 389 aa4.15□□□□□ -1.75
PCF11-202ENST00000528336 MIEF1Q9NQG6 463 aa4.15□□□□□ -1.75
PCF11-202ENST00000528336 CALYQ9NYX4 217 aa4.15□□□□□ -1.75
PCF11-202ENST00000528336 KCNIP1Q9NZI2 227 aa4.15□□□□□ -1.75
PCF11-202ENST00000528336 VPREB3Q9UKI3 123 aa4.15□□□□□ -1.75
PCF11-202ENST00000528336 PAIP2BQ9ULR5 123 aaKnown RBP4.15□□□□□ -1.75
PCF11-202ENST00000528336 KIAA1671Q9BY89 1806 aa4.15□□□□□ -1.75
PCF11-202ENST00000528336 MYO7AQ13402 2215 aa4.15□□□□□ -1.75
PCF11-202ENST00000528336 COL4A4P53420 1690 aaPredicted RBP4.15□□□□□ -1.75
PCF11-202ENST00000528336 PDCD11Q14690 1871 aaKnown RBP4.15□□□□□ -1.75
PCF11-202ENST00000528336 TMEM131Q92545 1883 aa4.15□□□□□ -1.75
PCF11-202ENST00000528336 NLRC5Q86WI3 1866 aa4.14□□□□□ -1.75
PCF11-202ENST00000528336 ZNF878C9JN71 531 aa4.14□□□□□ -1.75
PCF11-202ENST00000528336 LINC01619G3V211 115 aa4.14□□□□□ -1.75
PCF11-202ENST00000528336 SLC17A2O00624 439 aa4.14□□□□□ -1.75
PCF11-202ENST00000528336 NOS1APO75052 506 aaPredicted RBP4.14□□□□□ -1.75
PCF11-202ENST00000528336 SOX14O95416 240 aa4.14□□□□□ -1.75
PCF11-202ENST00000528336 KLF8O95600 359 aaPredicted RBP4.14□□□□□ -1.75
PCF11-202ENST00000528336 MRPL3P09001 348 aaKnown RBP4.14□□□□□ -1.75
PCF11-202ENST00000528336 ICAM2P13598 275 aa4.14□□□□□ -1.75
PCF11-202ENST00000528336 TCP1P17987 556 aaKnown RBP4.14□□□□□ -1.75
PCF11-202ENST00000528336 SERPINB5P36952 375 aa4.14□□□□□ -1.75
PCF11-202ENST00000528336 TTPAP49638 278 aa4.14□□□□□ -1.75
PCF11-202ENST00000528336 RAB7AP51149 207 aa4.14□□□□□ -1.75
PCF11-202ENST00000528336 APOC4P55056 127 aa4.14□□□□□ -1.75
PCF11-202ENST00000528336 TCL1AP56279 114 aa4.14□□□□□ -1.75
PCF11-202ENST00000528336 NUTF2P61970 127 aaKnown RBP4.14□□□□□ -1.75
PCF11-202ENST00000528336 RBX1P62877 108 aa4.14□□□□□ -1.75
PCF11-202ENST00000528336 IL5RAQ01344 420 aa4.14□□□□□ -1.75
PCF11-202ENST00000528336 FLI1Q01543 452 aaPredicted RBP4.14□□□□□ -1.75
PCF11-202ENST00000528336 APOFQ13790 326 aa4.14□□□□□ -1.75
PCF11-202ENST00000528336 EDDM3AQ14507 147 aa4.14□□□□□ -1.75
PCF11-202ENST00000528336 KIAA0040Q15053 153 aa4.14□□□□□ -1.75
PCF11-202ENST00000528336 NDUFA5Q16718 116 aa4.14□□□□□ -1.75
PCF11-202ENST00000528336 TMEM97Q5BJF2 176 aa4.14□□□□□ -1.75
PCF11-202ENST00000528336 TFDP3Q5H9I0 405 aa4.14□□□□□ -1.75
PCF11-202ENST00000528336 HIST2H3PS2Q5TEC6 136 aa4.14□□□□□ -1.75
PCF11-202ENST00000528336 KCTD16Q68DU8 428 aa4.14□□□□□ -1.75
PCF11-202ENST00000528336 OR2T5Q6IEZ7 315 aa4.14□□□□□ -1.75
PCF11-202ENST00000528336 FAM71E1Q6IPT2 247 aa4.14□□□□□ -1.75
PCF11-202ENST00000528336 FAM231DQ6ZW35 169 aa4.14□□□□□ -1.75
PCF11-202ENST00000528336 PEX26Q7Z412 305 aa4.14□□□□□ -1.75
PCF11-202ENST00000528336 C9orf40Q8IXQ3 194 aa4.14□□□□□ -1.75
PCF11-202ENST00000528336 ZNF676Q8N7Q3 588 aa4.14□□□□□ -1.75
PCF11-202ENST00000528336 OR2T29Q8NH02 315 aa4.14□□□□□ -1.75
PCF11-202ENST00000528336 Q8WTZ3 238 aa4.14□□□□□ -1.75
PCF11-202ENST00000528336 C2orf15Q8WU43 125 aaKnown RBP4.14□□□□□ -1.75
PCF11-202ENST00000528336 EEF1AKMT1Q8WVE0 214 aa4.14□□□□□ -1.75
PCF11-202ENST00000528336 RASSF5Q8WWW0 418 aa4.14□□□□□ -1.75
PCF11-202ENST00000528336 CHCHD10Q8WYQ3 142 aaPredicted RBP4.14□□□□□ -1.75
PCF11-202ENST00000528336 PGLYRP4Q96LB8 373 aa4.14□□□□□ -1.75
PCF11-202ENST00000528336 MAGEB18Q96M61 343 aa4.14□□□□□ -1.75
PCF11-202ENST00000528336 P2RX4Q99571 388 aa4.14□□□□□ -1.75
PCF11-202ENST00000528336 RNF126Q9BV68 326 aa4.14□□□□□ -1.75
PCF11-202ENST00000528336 RIOK2Q9BVS4 552 aaKnown RBP4.14□□□□□ -1.75
PCF11-202ENST00000528336 C20orf85Q9H1P6 137 aa4.14□□□□□ -1.75
PCF11-202ENST00000528336 ARV1Q9H2C2 271 aa4.14□□□□□ -1.75
PCF11-202ENST00000528336 VSIRQ9H7M9 311 aa4.14□□□□□ -1.75
PCF11-202ENST00000528336 PARVBQ9HBI1 364 aa4.14□□□□□ -1.75
PCF11-202ENST00000528336 CISHQ9NSE2 258 aa4.14□□□□□ -1.75
PCF11-202ENST00000528336 TREM2Q9NZC2 230 aa4.14□□□□□ -1.75
PCF11-202ENST00000528336 DPM3Q9P2X0 92 aa4.14□□□□□ -1.75
PCF11-202ENST00000528336 ST3GAL6Q9Y274 331 aa4.14□□□□□ -1.75
PCF11-202ENST00000528336 SIGLEC9Q9Y336 463 aa4.14□□□□□ -1.75
PCF11-202ENST00000528336 TRIP11Q15643 1979 aa4.14□□□□□ -1.75
PCF11-202ENST00000528336 SCN1AP35498 2009 aa4.14□□□□□ -1.75
PCF11-202ENST00000528336 PLXNA4Q9HCM2 1894 aa4.13□□□□□ -1.75
PCF11-202ENST00000528336 VWA8A3KMH1 1905 aa4.13□□□□□ -1.75
PCF11-202ENST00000528336 TGIF2-C20orf24A0A0A6YYL0 155 aa4.13□□□□□ -1.75
PCF11-202ENST00000528336 DAPL1A0PJW8 107 aa4.13□□□□□ -1.75
PCF11-202ENST00000528336 MYBPHLA2RUH7 354 aa4.13□□□□□ -1.75
PCF11-202ENST00000528336 HCRTO43612 131 aa4.13□□□□□ -1.75
PCF11-202ENST00000528336 PPBPP02775 128 aa4.13□□□□□ -1.75
PCF11-202ENST00000528336 OR4Q2P0C623 313 aa4.13□□□□□ -1.75
PCF11-202ENST00000528336 CD37P11049 281 aa4.13□□□□□ -1.75
PCF11-202ENST00000528336 SCGB1A1P11684 91 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms