RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 TMEM251Q8N6I4 163 aa3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 PTGR2Q8N8N7 351 aaPredicted RBP3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 ZNF709Q8N972 641 aa3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 FADS6Q8N9I5 356 aa3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 OR5A1Q8NGJ0 315 aa3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 OR4C16Q8NGL9 310 aa3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 OR2AE1Q8NHA4 323 aa3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 SLC25A40Q8TBP6 338 aa3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 MRAPQ8TCY5 172 aa3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 BLNKQ8WV28 456 aa3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 DDIT4LQ96D03 193 aa3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 GRAMD2BQ96HH9 432 aa3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 RCHY1Q96PM5 261 aa3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 GPA33Q99795 319 aa3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 NIPSNAP3BQ9BS92 247 aa3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 CABLES2Q9BTV7 478 aa3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 DOHHQ9BU89 302 aa3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 DERL1Q9BUN8 251 aa3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 EFCAB11Q9BUY7 163 aa3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 ABHD6Q9BV23 337 aa3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 RNF126Q9BV68 326 aa3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 SNRNP25Q9BV90 132 aaKnown RBP3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 MAP1LC3BQ9GZQ8 125 aa3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 LPAR5Q9H1C0 372 aa3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 RERGLQ9H628 205 aa3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 RDH14Q9HBH5 336 aa3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 Q9N2K0 584 aa3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 HINT3Q9NQE9 182 aaKnown RBP3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 NECAP2Q9NVZ3 263 aa3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 MED29Q9NX70 200 aa3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 ZNF581Q9P0T4 197 aa3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 MTFP1Q9UDX5 166 aa3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 PLAGL1Q9UM63 463 aa3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 CSAG2Q9Y5P2 127 aa3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 NOTCH3Q9UM47 2321 aa3.15□□□□□ -1.9
CLNS1A-209ENST00000527299 COL11A1P12107 1806 aaPredicted RBP3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 A0A087WX48 190 aa3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 SPAARA0A1B0GVQ0 90 aa3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 C17orf102A2RUQ5 167 aa3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 PSMB11A5LHX3 300 aa3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 GAGE10A6NGK3 116 aa3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 SMIM9A6NGZ8 99 aa3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 OR4C45A6NMZ5 311 aa3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 ANKRD30BLA7E2S9 258 aa3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 C15orf65H3BRN8 121 aa3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 SIRPB1O00241 398 aa3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 FOXH1O75593 365 aa3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 TRAPPC6AO75865 159 aa3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 CEACAM4O75871 244 aa3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 VENTXO95231 258 aa3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 MT-CO3P00414 261 aa3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 IFNA1P01562 189 aa3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 REG1AP05451 166 aa3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 ZNF286BP0CG31 522 aa3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 MMP9P14780 707 aa3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 SAT1P21673 171 aa3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 PPIBP23284 216 aaKnown RBP3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 PSMB4P28070 264 aa3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 HOXC9P31274 260 aa3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 SOAT1P35610 550 aa3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 FRKP42685 505 aaPredicted RBP3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 GUCA1AP43080 201 aaPredicted RBP3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 XCR1P46094 333 aa3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 UCNP55089 124 aa3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 PAX9P55771 341 aa3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 UBE2MP61081 183 aaKnown RBP3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 YPEL3P61236 119 aaPredicted RBP3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 MEF2BQ02080 365 aaPredicted RBP3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 FUT7Q11130 342 aa3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 NFATC4Q14934 902 aa3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 ATXN7L3Q14CW9 347 aaPredicted RBP3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 EXOSC7Q15024 291 aaKnown RBP3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 PRICKLE4Q2TBC4 344 aa3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 SLC25A35Q3KQZ1 300 aa3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 ZNF506Q5JVG8 444 aa3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 CPTPQ5TA50 214 aa3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 ZNF322Q6U7Q0 402 aaPredicted RBP3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 Q6ZSR6 202 aa3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 Q6ZSR9 355 aa3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 Q8N976 141 aa3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 ZIC4Q8N9L1 334 aa3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 LRRC75AQ8NAA5 344 aa3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 POC1AQ8NBT0 407 aa3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 OR4F17Q8NGA8 305 aa3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 OR10S1Q8NGN2 331 aa3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 OR10Q1Q8NGQ4 319 aa3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 JOSD2Q8TAC2 188 aa3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 MARCH1Q8TCQ1 289 aa3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 PTPMT1Q8WUK0 201 aaPredicted RBP3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 AQP3Q92482 292 aa3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 APOBEC3DQ96AK3 386 aaPredicted RBP3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 RNF183Q96D59 192 aa3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 UHRF2Q96PU4 802 aa3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 OR4F4Q96R69 305 aa3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 TNFRSF13CQ96RJ3 184 aa3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 PRR25Q96S07 402 aa3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 P2RX4Q99571 388 aa3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 ASCL2Q99929 193 aa3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 NDFIP1Q9BT67 221 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms