RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 SIRT7Q9NRC8 400 aa8.79□□□□□ -1
NEDD8-205ENST00000527046 CCDC59Q9P031 241 aaKnown RBP8.79□□□□□ -1
NEDD8-205ENST00000527046 ONECUT1Q9UBC0 465 aa8.79□□□□□ -1
NEDD8-205ENST00000527046 HIVEP2P31629 2446 aa8.79□□□□□ -1
NEDD8-205ENST00000527046 TRAV18A0A075B6X5 111 aa8.78□□□□□ -1
NEDD8-205ENST00000527046 IGHV3OR16-10A0A075B7F0 116 aa8.78□□□□□ -1
NEDD8-205ENST00000527046 A0A087X0M5 115 aa8.78□□□□□ -1
NEDD8-205ENST00000527046 A0A1B0GX30 115 aa8.78□□□□□ -1
NEDD8-205ENST00000527046 A0A1W2PQ09 198 aa8.78□□□□□ -1
NEDD8-205ENST00000527046 METTL21EPA6NDL7 271 aa8.78□□□□□ -1
NEDD8-205ENST00000527046 ZNF729A6NN14 1252 aaPredicted RBP8.78□□□□□ -1
NEDD8-205ENST00000527046 H3BUI4 141 aa8.78□□□□□ -1
NEDD8-205ENST00000527046 XRCC3O43542 346 aa8.78□□□□□ -1
NEDD8-205ENST00000527046 ORC5O43913 435 aa8.78□□□□□ -1
NEDD8-205ENST00000527046 CA11O75493 328 aa8.78□□□□□ -1
NEDD8-205ENST00000527046 RBP4P02753 201 aa8.78□□□□□ -1
NEDD8-205ENST00000527046 HOXB4P17483 251 aaPredicted RBP8.78□□□□□ -1
NEDD8-205ENST00000527046 SSTR5P35346 364 aa8.78□□□□□ -1
NEDD8-205ENST00000527046 UBE2NLQ5JXB2 153 aa8.78□□□□□ -1
NEDD8-205ENST00000527046 PRAMEF5Q5TYX0 476 aa8.78□□□□□ -1
NEDD8-205ENST00000527046 ZNF565Q8N9K5 539 aa8.78□□□□□ -1
NEDD8-205ENST00000527046 OR1L1Q8NH94 360 aa8.78□□□□□ -1
NEDD8-205ENST00000527046 RFESDQ8TAC1 157 aa8.78□□□□□ -1
NEDD8-205ENST00000527046 UBALD1Q8TB05 177 aa8.78□□□□□ -1
NEDD8-205ENST00000527046 C17orf50Q8WW18 174 aa8.78□□□□□ -1
NEDD8-205ENST00000527046 KIRREL1Q96J84 757 aa8.78□□□□□ -1
NEDD8-205ENST00000527046 ZNF714Q96N38 554 aa8.78□□□□□ -1
NEDD8-205ENST00000527046 SOSTQ9BQB4 213 aa8.78□□□□□ -1
NEDD8-205ENST00000527046 AUNIPQ9H7T9 357 aa8.78□□□□□ -1
NEDD8-205ENST00000527046 METTL8Q9H825 291 aaKnown RBP8.78□□□□□ -1
NEDD8-205ENST00000527046 Q9N2K0 584 aa8.78□□□□□ -1
NEDD8-205ENST00000527046 CALYQ9NYX4 217 aa8.78□□□□□ -1
NEDD8-205ENST00000527046 OR6C3Q9NZP0 311 aa8.78□□□□□ -1
NEDD8-205ENST00000527046 LPAR3Q9UBY5 353 aa8.78□□□□□ -1
NEDD8-205ENST00000527046 ZNF69Q9UC07 566 aa8.78□□□□□ -1
NEDD8-205ENST00000527046 NSD1Q96L73 2696 aaPredicted RBP8.77□□□□□ -1.01
NEDD8-205ENST00000527046 TRGV10A0A0A0MS01 117 aa8.77□□□□□ -1.01
NEDD8-205ENST00000527046 IGKV1-6A0A0C4DH72 117 aa8.77□□□□□ -1.01
NEDD8-205ENST00000527046 MEIOCA2RUB1 952 aa8.77□□□□□ -1.01
NEDD8-205ENST00000527046 FUOMA2VDF0 154 aa8.77□□□□□ -1.01
NEDD8-205ENST00000527046 TMEM235A6NFC5 223 aa8.77□□□□□ -1.01
NEDD8-205ENST00000527046 F2RL2O00254 374 aa8.77□□□□□ -1.01
NEDD8-205ENST00000527046 APOA1P02647 267 aa8.77□□□□□ -1.01
NEDD8-205ENST00000527046 GZMHP20718 246 aa8.77□□□□□ -1.01
NEDD8-205ENST00000527046 CD34P28906 385 aa8.77□□□□□ -1.01
NEDD8-205ENST00000527046 HMGN3Q15651 99 aa8.77□□□□□ -1.01
NEDD8-205ENST00000527046 METTL11BQ5VVY1 283 aa8.77□□□□□ -1.01
NEDD8-205ENST00000527046 HACD4Q5VWC8 232 aa8.77□□□□□ -1.01
NEDD8-205ENST00000527046 RUSC1-AS1Q66K80 236 aa8.77□□□□□ -1.01
NEDD8-205ENST00000527046 ZNF782Q6ZMW2 699 aaPredicted RBP8.77□□□□□ -1.01
NEDD8-205ENST00000527046 PDZD9Q8IXQ8 264 aa8.77□□□□□ -1.01
NEDD8-205ENST00000527046 OR11H6Q8NGC7 330 aa8.77□□□□□ -1.01
NEDD8-205ENST00000527046 LHX4Q969G2 390 aa8.77□□□□□ -1.01
NEDD8-205ENST00000527046 ZNF48Q96MX3 618 aaPredicted RBP8.77□□□□□ -1.01
NEDD8-205ENST00000527046 OCEL1Q9H607 264 aa8.77□□□□□ -1.01
NEDD8-205ENST00000527046 TAF9BQ9HBM6 251 aa8.77□□□□□ -1.01
NEDD8-205ENST00000527046 NDUFA13Q9P0J0 144 aa8.77□□□□□ -1.01
NEDD8-205ENST00000527046 ZNF230Q9UIE0 474 aaPredicted RBP8.77□□□□□ -1.01
NEDD8-205ENST00000527046 SVEP1Q4LDE5 3571 aa8.77□□□□□ -1.01
NEDD8-205ENST00000527046 MTORP42345 2549 aa8.77□□□□□ -1.01
NEDD8-205ENST00000527046 A0A0A6YYH2 397 aa8.76□□□□□ -1.01
NEDD8-205ENST00000527046 TRAV40A0A0B4J280 105 aa8.76□□□□□ -1.01
NEDD8-205ENST00000527046 IGHV1-69DA0A0B4J2H0 117 aa8.76□□□□□ -1.01
NEDD8-205ENST00000527046 A6NJ64 397 aa8.76□□□□□ -1.01
NEDD8-205ENST00000527046 POM121CA8CG34 1229 aa8.76□□□□□ -1.01
NEDD8-205ENST00000527046 SERPINE3A8MV23 424 aa8.76□□□□□ -1.01
NEDD8-205ENST00000527046 ODF3BA8MYP8 253 aa8.76□□□□□ -1.01
NEDD8-205ENST00000527046 IGLV1-47P01700 117 aa8.76□□□□□ -1.01
NEDD8-205ENST00000527046 IGHV1-69P01742 117 aa8.76□□□□□ -1.01
NEDD8-205ENST00000527046 HBZP02008 142 aa8.76□□□□□ -1.01
NEDD8-205ENST00000527046 FCGR3AP08637 254 aa8.76□□□□□ -1.01
NEDD8-205ENST00000527046 GSTP1P09211 210 aaKnown RBP8.76□□□□□ -1.01
NEDD8-205ENST00000527046 SCTP09683 121 aa8.76□□□□□ -1.01
NEDD8-205ENST00000527046 GLP1RP43220 463 aa8.76□□□□□ -1.01
NEDD8-205ENST00000527046 ZNF134P52741 427 aa8.76□□□□□ -1.01
NEDD8-205ENST00000527046 TAS2R20P59543 309 aa8.76□□□□□ -1.01
NEDD8-205ENST00000527046 GUCA2AQ02747 115 aa8.76□□□□□ -1.01
NEDD8-205ENST00000527046 HERPUD1Q15011 391 aa8.76□□□□□ -1.01
NEDD8-205ENST00000527046 FAM189A2Q15884 450 aa8.76□□□□□ -1.01
NEDD8-205ENST00000527046 PNLIPRP3Q17RR3 467 aa8.76□□□□□ -1.01
NEDD8-205ENST00000527046 BRD3OSQ6XYD6 125 aa8.76□□□□□ -1.01
NEDD8-205ENST00000527046 Q6ZS49 121 aa8.76□□□□□ -1.01
NEDD8-205ENST00000527046 C9orf139Q6ZV77 190 aa8.76□□□□□ -1.01
NEDD8-205ENST00000527046 LAX1Q8IWV1 398 aa8.76□□□□□ -1.01
NEDD8-205ENST00000527046 DYNAPQ8N1N2 210 aa8.76□□□□□ -1.01
NEDD8-205ENST00000527046 ZNF439Q8NDP4 499 aa8.76□□□□□ -1.01
NEDD8-205ENST00000527046 NANPQ8TBE9 248 aa8.76□□□□□ -1.01
NEDD8-205ENST00000527046 NEK7Q8TDX7 302 aa8.76□□□□□ -1.01
NEDD8-205ENST00000527046 NUDCD2Q8WVJ2 157 aa8.76□□□□□ -1.01
NEDD8-205ENST00000527046 GCDHQ92947 438 aaPredicted RBP8.76□□□□□ -1.01
NEDD8-205ENST00000527046 ARL11Q969Q4 196 aa8.76□□□□□ -1.01
NEDD8-205ENST00000527046 S100A16Q96FQ6 103 aaKnown RBP8.76□□□□□ -1.01
NEDD8-205ENST00000527046 ABHD1Q96SE0 405 aa8.76□□□□□ -1.01
NEDD8-205ENST00000527046 CMSS1Q9BQ75 279 aaKnown RBP8.76□□□□□ -1.01
NEDD8-205ENST00000527046 DCUN1D5Q9BTE7 237 aa8.76□□□□□ -1.01
NEDD8-205ENST00000527046 PRDM13Q9H4Q3 707 aa8.76□□□□□ -1.01
NEDD8-205ENST00000527046 ZNF286AQ9HBT8 521 aa8.76□□□□□ -1.01
NEDD8-205ENST00000527046 IDI2-AS1Q9NZ38 188 aa8.76□□□□□ -1.01
NEDD8-205ENST00000527046 ZNRD1Q9P1U0 126 aa8.76□□□□□ -1.01
NEDD8-205ENST00000527046 NUP50Q9UKX7 468 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms