RNA–Protein interactions for RNA: ENST00000526313.5

USH1C-204, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best)

Gene USH1C, Length 2,149 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-204ENST00000526313 PLEKHA2Q9HB19 425 aa13.44□□□□□ -0.26
USH1C-204ENST00000526313 LAMA5O15230 3695 aa13.44□□□□□ -0.26
USH1C-204ENST00000526313 DSPP15924 2871 aaKnown RBP13.43□□□□□ -0.26
USH1C-204ENST00000526313 DUXBA0A1W2PPF3 345 aa13.43□□□□□ -0.26
USH1C-204ENST00000526313 RPL12P30050 165 aaKnown RBP13.43□□□□□ -0.26
USH1C-204ENST00000526313 SMCO1Q147U7 214 aa13.43□□□□□ -0.26
USH1C-204ENST00000526313 HMGN3Q15651 99 aa13.43□□□□□ -0.26
USH1C-204ENST00000526313 MSMPQ1L6U9 139 aa13.43□□□□□ -0.26
USH1C-204ENST00000526313 ACP7Q6ZNF0 438 aa13.43□□□□□ -0.26
USH1C-204ENST00000526313 CCDC28AQ8IWP9 274 aa13.43□□□□□ -0.26
USH1C-204ENST00000526313 OR4D5Q8NGN0 318 aa13.43□□□□□ -0.26
USH1C-204ENST00000526313 TAAR3PQ9P1P4 343 aa13.43□□□□□ -0.26
USH1C-204ENST00000526313 FZR1Q9UM11 496 aa13.43□□□□□ -0.26
USH1C-204ENST00000526313 PTPRZ1P23471 2315 aaPredicted RBP13.43□□□□□ -0.26
USH1C-204ENST00000526313 IGHV3-64DA0A0J9YX35 117 aa13.43□□□□□ -0.26
USH1C-204ENST00000526313 A0A1B0GW55 424 aa13.43□□□□□ -0.26
USH1C-204ENST00000526313 CLEC18AA5D8T8 446 aa13.43□□□□□ -0.26
USH1C-204ENST00000526313 E5RGE8 158 aa13.43□□□□□ -0.26
USH1C-204ENST00000526313 PGLYRP1O75594 196 aaPredicted RBP13.43□□□□□ -0.26
USH1C-204ENST00000526313 HEXAP06865 529 aa13.43□□□□□ -0.26
USH1C-204ENST00000526313 DUX4L2P0CJ85 424 aa13.43□□□□□ -0.26
USH1C-204ENST00000526313 DUX4L3P0CJ86 424 aa13.43□□□□□ -0.26
USH1C-204ENST00000526313 DUX4L4P0CJ87 422 aa13.43□□□□□ -0.26
USH1C-204ENST00000526313 DUX4L5P0CJ88 424 aa13.43□□□□□ -0.26
USH1C-204ENST00000526313 DUX4L6P0CJ89 424 aa13.43□□□□□ -0.26
USH1C-204ENST00000526313 DUX4L7P0CJ90 424 aa13.43□□□□□ -0.26
USH1C-204ENST00000526313 NKX6-1P78426 367 aaPredicted RBP13.43□□□□□ -0.26
USH1C-204ENST00000526313 TMEM268Q5VZI3 342 aa13.43□□□□□ -0.26
USH1C-204ENST00000526313 SPACA3Q8IXA5 215 aa13.43□□□□□ -0.26
USH1C-204ENST00000526313 CMTM1Q8IZ96 169 aa13.43□□□□□ -0.26
USH1C-204ENST00000526313 CLEC18CQ8NCF0 446 aa13.43□□□□□ -0.26
USH1C-204ENST00000526313 OR52M1Q8NGK5 317 aa13.43□□□□□ -0.26
USH1C-204ENST00000526313 LILRB1Q8NHL6 650 aaPredicted RBP13.43□□□□□ -0.26
USH1C-204ENST00000526313 LRRC20Q8TCA0 184 aa13.43□□□□□ -0.26
USH1C-204ENST00000526313 MSL2Q9HCI7 577 aa13.43□□□□□ -0.26
USH1C-204ENST00000526313 DUX4Q9UBX2 424 aa13.43□□□□□ -0.26
USH1C-204ENST00000526313 NSG2Q9Y328 171 aa13.43□□□□□ -0.26
USH1C-204ENST00000526313 UBE2J1Q9Y385 318 aaPredicted RBP13.43□□□□□ -0.26
USH1C-204ENST00000526313 A8MXE2 369 aa13.42□□□□□ -0.26
USH1C-204ENST00000526313 WNT9BO14905 357 aa13.42□□□□□ -0.26
USH1C-204ENST00000526313 PSPNO60542 156 aa13.42□□□□□ -0.26
USH1C-204ENST00000526313 MZT1Q08AG7 82 aa13.42□□□□□ -0.26
USH1C-204ENST00000526313 FOXC1Q12948 553 aa13.42□□□□□ -0.26
USH1C-204ENST00000526313 TESK1Q15569 626 aa13.42□□□□□ -0.26
USH1C-204ENST00000526313 FOXRED2Q8IWF2 684 aa13.42□□□□□ -0.26
USH1C-204ENST00000526313 Q8NA96 180 aa13.42□□□□□ -0.26
USH1C-204ENST00000526313 IL22RA2Q969J5 263 aa13.42□□□□□ -0.26
USH1C-204ENST00000526313 C11orf1Q9H5F2 150 aa13.42□□□□□ -0.26
USH1C-204ENST00000526313 GLS2Q9UI32 602 aa13.42□□□□□ -0.26
USH1C-204ENST00000526313 ERRFI1Q9UJM3 462 aaPredicted RBP13.42□□□□□ -0.26
USH1C-204ENST00000526313 TMA7Q9Y2S6 64 aaKnown RBP13.42□□□□□ -0.26
USH1C-204ENST00000526313 LSM5Q9Y4Y9 91 aaKnown RBP13.42□□□□□ -0.26
USH1C-204ENST00000526313 HEATR1Q9H583 2144 aaKnown RBP13.42□□□□□ -0.26
USH1C-204ENST00000526313 BOD1L1Q8NFC6 3051 aa13.42□□□□□ -0.26
USH1C-204ENST00000526313 H0Y980 276 aa13.42□□□□□ -0.26
USH1C-204ENST00000526313 IFNL4K9M1U5 179 aa13.42□□□□□ -0.26
USH1C-204ENST00000526313 HSD17B6O14756 317 aa13.42□□□□□ -0.26
USH1C-204ENST00000526313 IGHV3-13P01766 116 aa13.42□□□□□ -0.26
USH1C-204ENST00000526313 GLRXP35754 106 aa13.42□□□□□ -0.26
USH1C-204ENST00000526313 CD200P41217 278 aa13.42□□□□□ -0.26
USH1C-204ENST00000526313 ZNF83P51522 516 aa13.42□□□□□ -0.26
USH1C-204ENST00000526313 PRAMEF6Q5VXH4 476 aa13.42□□□□□ -0.26
USH1C-204ENST00000526313 SLC35E4Q6ICL7 350 aa13.42□□□□□ -0.26
USH1C-204ENST00000526313 MEX3BQ6ZN04 569 aaKnown RBP13.42□□□□□ -0.26
USH1C-204ENST00000526313 OR5D13Q8NGL4 314 aa13.42□□□□□ -0.26
USH1C-204ENST00000526313 OR1A1Q9P1Q5 309 aa13.42□□□□□ -0.26
USH1C-204ENST00000526313 TRAPPC2LQ9UL33 140 aa13.42□□□□□ -0.26
USH1C-204ENST00000526313 TP53TG5Q9Y2B4 290 aa13.42□□□□□ -0.26
USH1C-204ENST00000526313 NKX2-6A6NCS4 301 aa13.41□□□□□ -0.26
USH1C-204ENST00000526313 IGLV2-14P01704 120 aa13.41□□□□□ -0.26
USH1C-204ENST00000526313 GAPDHP04406 335 aaKnown RBP13.41□□□□□ -0.26
USH1C-204ENST00000526313 FAM157CP0CG43 387 aa13.41□□□□□ -0.26
USH1C-204ENST00000526313 ZP3P21754 424 aa13.41□□□□□ -0.26
USH1C-204ENST00000526313 NMSQ5H8A3 153 aa13.41□□□□□ -0.26
USH1C-204ENST00000526313 OR10V1Q8NGI7 309 aa13.41□□□□□ -0.26
USH1C-204ENST00000526313 SCNM1Q9BWG6 230 aa13.41□□□□□ -0.26
USH1C-204ENST00000526313 SEBOXQ9HB31 216 aaPredicted RBP13.41□□□□□ -0.26
USH1C-204ENST00000526313 ANKRD11Q6UB99 2663 aaPredicted RBP13.41□□□□□ -0.26
USH1C-204ENST00000526313 TRAV39A0A0B4J263 110 aa13.4□□□□□ -0.26
USH1C-204ENST00000526313 TMEM30CPA0ZSE6 113 aa13.4□□□□□ -0.26
USH1C-204ENST00000526313 ST8SIA3O43173 380 aa13.4□□□□□ -0.26
USH1C-204ENST00000526313 F2RP25116 425 aa13.4□□□□□ -0.26
USH1C-204ENST00000526313 CFHR2P36980 270 aa13.4□□□□□ -0.26
USH1C-204ENST00000526313 EIF5AP63241 154 aaKnown RBP13.4□□□□□ -0.26
USH1C-204ENST00000526313 TBR1Q16650 682 aa13.4□□□□□ -0.26
USH1C-204ENST00000526313 GPR157Q5UAW9 335 aa13.4□□□□□ -0.26
USH1C-204ENST00000526313 DOLPP1Q86YN1 238 aa13.4□□□□□ -0.26
USH1C-204ENST00000526313 ZNF695Q8IW36 515 aa13.4□□□□□ -0.26
USH1C-204ENST00000526313 DMBX1Q8NFW5 382 aa13.4□□□□□ -0.26
USH1C-204ENST00000526313 MUCL1Q96DR8 90 aa13.4□□□□□ -0.26
USH1C-204ENST00000526313 AKR1E2Q96JD6 320 aa13.4□□□□□ -0.26
USH1C-204ENST00000526313 TOLLIPQ9H0E2 274 aa13.4□□□□□ -0.26
USH1C-204ENST00000526313 TAF9BQ9HBM6 251 aa13.4□□□□□ -0.26
USH1C-204ENST00000526313 POMT1Q9Y6A1 747 aa13.4□□□□□ -0.26
USH1C-204ENST00000526313 K7ENP7 123 aa13.4□□□□□ -0.26
USH1C-204ENST00000526313 P2RY1P47900 373 aa13.4□□□□□ -0.26
USH1C-204ENST00000526313 CEBPDP49716 269 aaPredicted RBP13.4□□□□□ -0.26
USH1C-204ENST00000526313 PAX5Q02548 391 aa13.4□□□□□ -0.26
USH1C-204ENST00000526313 LRP11Q86VZ4 500 aa13.4□□□□□ -0.26
USH1C-204ENST00000526313 OR10Z1Q8NGY1 313 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms