RNA–Protein interactions for RNA: ENST00000525469.1

CD44-218, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 705 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-218ENST00000525469 SH2B3Q9UQQ2 575 aa4.34□□□□□ -1.71
CD44-218ENST00000525469 MRPS33Q9Y291 106 aaKnown RBP4.34□□□□□ -1.71
CD44-218ENST00000525469 MRPS16Q9Y3D3 137 aaKnown RBP4.34□□□□□ -1.71
CD44-218ENST00000525469 ZNF337Q9Y3M9 751 aa4.34□□□□□ -1.71
CD44-218ENST00000525469 USF3Q68DE3 2245 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 TRAV9-1A0A075B6T8 112 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 A0A0A6YYC8 382 aaPredicted RBP4.33□□□□□ -1.72
CD44-218ENST00000525469 A0A1W2PPE2 198 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 MAP1LC3B2A6NCE7 125 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 OR51F1A6NGY5 319 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 E5RGE8 158 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 H3BQ15 152 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 I3L1I5 382 aaPredicted RBP4.33□□□□□ -1.72
CD44-218ENST00000525469 M0R129 80 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 FOXE1O00358 373 aaPredicted RBP4.33□□□□□ -1.72
CD44-218ENST00000525469 XKRYO14609 159 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 RAMP3O60896 148 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 SLC16A8O95907 504 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 MBPP02686 304 aaPredicted RBP4.33□□□□□ -1.72
CD44-218ENST00000525469 AMBPP02760 352 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 PRH1P02810 166 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 TRGC2P03986 189 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 ARG1P05089 322 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 ERCC1P07992 297 aaPredicted RBP4.33□□□□□ -1.72
CD44-218ENST00000525469 ANXA4P09525 319 aaPredicted RBP4.33□□□□□ -1.72
CD44-218ENST00000525469 OR10J4P0C629 311 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 SERPINA2P20848 420 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 ZNF10P21506 573 aaPredicted RBP4.33□□□□□ -1.72
CD44-218ENST00000525469 CTSSP25774 331 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 AQP1P29972 269 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 CMPK1P30085 196 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 TLX1P31314 330 aaPredicted RBP4.33□□□□□ -1.72
CD44-218ENST00000525469 TIA1P31483 386 aaKnown RBP eCLIP4.33□□□□□ -1.72
CD44-218ENST00000525469 DCTDP32321 178 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 PTGER1P34995 402 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 SRP14P37108 136 aaKnown RBP4.33□□□□□ -1.72
CD44-218ENST00000525469 CEACAM3P40198 252 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 AQP2P41181 271 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 FRKP42685 505 aaPredicted RBP4.33□□□□□ -1.72
CD44-218ENST00000525469 LPAR6P43657 344 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 P2RY1P47900 373 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 CRYBA2P53672 197 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 TAS2R50P59544 299 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 LCN6P62502 163 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 RHOGP84095 191 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 PDE7AQ13946 482 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 DAZAP2Q15038 168 aaPredicted RBP4.33□□□□□ -1.72
CD44-218ENST00000525469 ARL6IP1Q15041 203 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 SLC9A3R2Q15599 337 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 OR1C1Q15619 314 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 ZNF791Q3KP31 576 aaPredicted RBP4.33□□□□□ -1.72
CD44-218ENST00000525469 Q499Y3 187 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 COX19Q49B96 90 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 ACSF3Q4G176 576 aaPredicted RBP4.33□□□□□ -1.72
CD44-218ENST00000525469 MIDNQ504T8 468 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 OCIAD2Q56VL3 154 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 RTL6Q6ICC9 239 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 NIPAL3Q6P499 406 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 TEX43Q6ZNM6 134 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 Q6ZSN1 163 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 FCRLAQ7L513 359 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 PRSS45Q7RTY3 260 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 GLT6D1Q7Z4J2 308 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 ZNF429Q86V71 674 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 NR2C2APQ86WQ0 139 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 CATSPERDQ86XM0 798 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 ZNF584Q8IVC4 421 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 ARHGAP12Q8IWW6 846 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 NRMQ8IXM6 262 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 KLHDC8AQ8IYD2 350 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 ZNF101Q8IZC7 436 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 GBGT1Q8N5D6 347 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 C17orf47Q8NEP4 570 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 OR5A2Q8NGI9 324 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 OR52B4Q8NGK2 314 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 OR13C5Q8NGS8 318 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 OR4S2Q8NH73 311 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 GPR119Q8TDV5 335 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 Q8WTZ3 238 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 TMEM170AQ8WVE7 144 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 TMEM234Q8WY98 164 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 SMPDL3BQ92485 455 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 ESAMQ96AP7 390 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 SEH1LQ96EE3 360 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 GNPNAT1Q96EK6 184 aaPredicted RBP4.33□□□□□ -1.72
CD44-218ENST00000525469 PGLYRP3Q96LB9 341 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 C2orf50Q96LR7 162 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 JSRP1Q96MG2 331 aaPredicted RBP4.33□□□□□ -1.72
CD44-218ENST00000525469 SMIM14Q96QK8 99 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 SLC6A7Q99884 636 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 GINS3Q9BRX5 216 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 ZNF649Q9BS31 505 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 FAAP24Q9BTP7 215 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 CABLES2Q9BTV7 478 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 C19orf24Q9BVV8 132 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 PLA2G12AQ9BZM1 189 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 MAP1LC3BQ9GZQ8 125 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 CST11Q9H112 138 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 WDR13Q9H1Z4 485 aa4.33□□□□□ -1.72
CD44-218ENST00000525469 Q9N2K0 584 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms