RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 OPA3Q9H6K4 179 aa9.46□□□□□ -0.9
HDAC9-228ENST00000524023 TRBV6-6A0A0A6YYG2 114 aa9.45□□□□□ -0.9
HDAC9-228ENST00000524023 RBFOX3A6NFN3 312 aa9.45□□□□□ -0.9
HDAC9-228ENST00000524023 C5orf52A6NGY3 159 aa9.45□□□□□ -0.9
HDAC9-228ENST00000524023 EIF3GO75821 320 aaKnown RBP eCLIP9.45□□□□□ -0.9
HDAC9-228ENST00000524023 OR1C1Q15619 314 aa9.45□□□□□ -0.9
HDAC9-228ENST00000524023 LPAL2Q16609 132 aa9.45□□□□□ -0.9
HDAC9-228ENST00000524023 EIF2S3LQ2VIR3 472 aaKnown RBP9.45□□□□□ -0.9
HDAC9-228ENST00000524023 C1orf210Q8IVY1 113 aa9.45□□□□□ -0.9
HDAC9-228ENST00000524023 DDA1Q9BW61 102 aa9.45□□□□□ -0.9
HDAC9-228ENST00000524023 TAAR3PQ9P1P4 343 aa9.45□□□□□ -0.9
HDAC9-228ENST00000524023 RNF115Q9Y4L5 304 aa9.45□□□□□ -0.9
HDAC9-228ENST00000524023 FAM186AA6NE01 2351 aa9.44□□□□□ -0.9
HDAC9-228ENST00000524023 TRAV24A0A0B4J272 114 aa9.44□□□□□ -0.9
HDAC9-228ENST00000524023 BTBD17A6NE02 478 aa9.44□□□□□ -0.9
HDAC9-228ENST00000524023 ANKRD30BLA7E2S9 258 aa9.44□□□□□ -0.9
HDAC9-228ENST00000524023 HS3ST1O14792 307 aa9.44□□□□□ -0.9
HDAC9-228ENST00000524023 LILRA1O75019 489 aa9.44□□□□□ -0.9
HDAC9-228ENST00000524023 NXPH3O95157 252 aa9.44□□□□□ -0.9
HDAC9-228ENST00000524023 ARG1P05089 322 aa9.44□□□□□ -0.9
HDAC9-228ENST00000524023 JMJD7P0C870 316 aa9.44□□□□□ -0.9
HDAC9-228ENST00000524023 SPINK2P20155 84 aa9.44□□□□□ -0.9
HDAC9-228ENST00000524023 RAB5AP20339 215 aa9.44□□□□□ -0.9
HDAC9-228ENST00000524023 EPHA1P21709 976 aa9.44□□□□□ -0.9
HDAC9-228ENST00000524023 F2RP25116 425 aa9.44□□□□□ -0.9
HDAC9-228ENST00000524023 PAX9P55771 341 aa9.44□□□□□ -0.9
HDAC9-228ENST00000524023 PLP2Q04941 152 aa9.44□□□□□ -0.9
HDAC9-228ENST00000524023 SOHLH1Q5JUK2 328 aa9.44□□□□□ -0.9
HDAC9-228ENST00000524023 ZNF324BQ6AW86 544 aaPredicted RBP9.44□□□□□ -0.9
HDAC9-228ENST00000524023 SP5Q6BEB4 398 aaPredicted RBP9.44□□□□□ -0.9
HDAC9-228ENST00000524023 TCEAL6Q6IPX3 200 aa9.44□□□□□ -0.9
HDAC9-228ENST00000524023 ZNF880Q6PDB4 577 aa9.44□□□□□ -0.9
HDAC9-228ENST00000524023 TMEM251Q8N6I4 163 aa9.44□□□□□ -0.9
HDAC9-228ENST00000524023 TMEM217Q8N7C4 229 aa9.44□□□□□ -0.9
HDAC9-228ENST00000524023 RDH5Q92781 318 aa9.44□□□□□ -0.9
HDAC9-228ENST00000524023 TCEAL3Q969E4 200 aa9.44□□□□□ -0.9
HDAC9-228ENST00000524023 GNPNAT1Q96EK6 184 aaPredicted RBP9.44□□□□□ -0.9
HDAC9-228ENST00000524023 PLA2G3Q9NZ20 509 aa9.44□□□□□ -0.9
HDAC9-228ENST00000524023 OR2W1Q9Y3N9 320 aa9.44□□□□□ -0.9
HDAC9-228ENST00000524023 hCG_1809904A0A1W2PP81 198 aa9.44□□□□□ -0.9
HDAC9-228ENST00000524023 A0A1W2PPE2 198 aa9.44□□□□□ -0.9
HDAC9-228ENST00000524023 A0A1W2PR64 198 aa9.44□□□□□ -0.9
HDAC9-228ENST00000524023 A0A1W2PRV1 198 aa9.44□□□□□ -0.9
HDAC9-228ENST00000524023 WRBO00258 174 aa9.44□□□□□ -0.9
HDAC9-228ENST00000524023 SLC33A1O00400 549 aaPredicted RBP9.44□□□□□ -0.9
HDAC9-228ENST00000524023 UBE2CO00762 179 aa9.44□□□□□ -0.9
HDAC9-228ENST00000524023 S100A6P06703 90 aa9.44□□□□□ -0.9
HDAC9-228ENST00000524023 ACAA1P09110 424 aaPredicted RBP9.44□□□□□ -0.9
HDAC9-228ENST00000524023 WNT5AP41221 380 aa9.44□□□□□ -0.9
HDAC9-228ENST00000524023 GNG3P63215 75 aa9.44□□□□□ -0.9
HDAC9-228ENST00000524023 HLA-DRB3P79483 266 aa9.44□□□□□ -0.9
HDAC9-228ENST00000524023 ZNF154Q13106 437 aa9.44□□□□□ -0.9
HDAC9-228ENST00000524023 DBX2Q6ZNG2 339 aa9.44□□□□□ -0.9
HDAC9-228ENST00000524023 NUFIP2Q7Z417 695 aaKnown RBP9.44□□□□□ -0.9
HDAC9-228ENST00000524023 ZNF573Q86YE8 665 aa9.44□□□□□ -0.9
HDAC9-228ENST00000524023 FAM58AQ8N1B3 248 aa9.44□□□□□ -0.9
HDAC9-228ENST00000524023 FAM24BQ8N5W8 94 aa9.44□□□□□ -0.9
HDAC9-228ENST00000524023 OR10J5Q8NHC4 309 aa9.44□□□□□ -0.9
HDAC9-228ENST00000524023 FOXJ2Q9P0K8 574 aa9.44□□□□□ -0.9
HDAC9-228ENST00000524023 KIAA1456Q9P272 454 aa9.44□□□□□ -0.9
HDAC9-228ENST00000524023 MPC1Q9Y5U8 109 aa9.44□□□□□ -0.9
HDAC9-228ENST00000524023 MED13Q9UHV7 2174 aa9.43□□□□□ -0.9
HDAC9-228ENST00000524023 A0A0G2JRQ6 117 aa9.43□□□□□ -0.9
HDAC9-228ENST00000524023 A0A1W2PPE3 182 aa9.43□□□□□ -0.9
HDAC9-228ENST00000524023 OR5B21A6NL26 309 aa9.43□□□□□ -0.9
HDAC9-228ENST00000524023 C3orf80F5H4A9 247 aa9.43□□□□□ -0.9
HDAC9-228ENST00000524023 CEACAM1P13688 526 aa9.43□□□□□ -0.9
HDAC9-228ENST00000524023 ITGA3P26006 1051 aa9.43□□□□□ -0.9
HDAC9-228ENST00000524023 CTAG1AP78358 180 aa9.43□□□□□ -0.9
HDAC9-228ENST00000524023 RUNX1Q01196 453 aa9.43□□□□□ -0.9
HDAC9-228ENST00000524023 IL24Q13007 206 aa9.43□□□□□ -0.9
HDAC9-228ENST00000524023 RNPS1Q15287 305 aaKnown RBP9.43□□□□□ -0.9
HDAC9-228ENST00000524023 HIKESHIQ53FT3 197 aa9.43□□□□□ -0.9
HDAC9-228ENST00000524023 LINC00696Q6ZRV3 163 aa9.43□□□□□ -0.9
HDAC9-228ENST00000524023 H1FOOQ8IZA3 346 aaPredicted RBP9.43□□□□□ -0.9
HDAC9-228ENST00000524023 C17orf78Q8N4C9 275 aa9.43□□□□□ -0.9
HDAC9-228ENST00000524023 GPR146Q96CH1 333 aa9.43□□□□□ -0.9
HDAC9-228ENST00000524023 DLL3Q9NYJ7 618 aa9.43□□□□□ -0.9
HDAC9-228ENST00000524023 ABI3Q9P2A4 366 aa9.43□□□□□ -0.9
HDAC9-228ENST00000524023 ERRFI1Q9UJM3 462 aaPredicted RBP9.43□□□□□ -0.9
HDAC9-228ENST00000524023 PUS1Q9Y606 427 aaKnown RBP eCLIP9.43□□□□□ -0.9
HDAC9-228ENST00000524023 ZNF14P17017 642 aaPredicted RBP9.43□□□□□ -0.9
HDAC9-228ENST00000524023 S100GP29377 79 aa9.43□□□□□ -0.9
HDAC9-228ENST00000524023 APLNRP35414 380 aa9.43□□□□□ -0.9
HDAC9-228ENST00000524023 PLGLB1Q02325 96 aa9.43□□□□□ -0.9
HDAC9-228ENST00000524023 OR8G1Q15617 311 aa9.43□□□□□ -0.9
HDAC9-228ENST00000524023 C3AR1Q16581 482 aa9.43□□□□□ -0.9
HDAC9-228ENST00000524023 OR51H1Q8NH63 302 aa9.43□□□□□ -0.9
HDAC9-228ENST00000524023 MALSU1Q96EH3 234 aa9.43□□□□□ -0.9
HDAC9-228ENST00000524023 ATP5SQ99766 215 aa9.43□□□□□ -0.9
HDAC9-228ENST00000524023 CABLES2Q9BTV7 478 aa9.43□□□□□ -0.9
HDAC9-228ENST00000524023 PKIBQ9C010 78 aa9.43□□□□□ -0.9
HDAC9-228ENST00000524023 OR51B6Q9H340 312 aa9.43□□□□□ -0.9
HDAC9-228ENST00000524023 IFT22Q9H7X7 185 aa9.43□□□□□ -0.9
HDAC9-228ENST00000524023 MED12LQ86YW9 2145 aa9.42□□□□□ -0.9
HDAC9-228ENST00000524023 A0A1B0GU03 582 aa9.42□□□□□ -0.9
HDAC9-228ENST00000524023 A0A1W2PNU3 283 aaPredicted RBP9.42□□□□□ -0.9
HDAC9-228ENST00000524023 KIAA1324LA8MWY0 1029 aaPredicted RBP9.42□□□□□ -0.9
HDAC9-228ENST00000524023 SRP19P09132 144 aaKnown RBP9.42□□□□□ -0.9
HDAC9-228ENST00000524023 PSG2P11465 335 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms