RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 PHF1O43189 567 aaPredicted RBP15.56■□□□□ 0.08
TRAPPC9-210ENST00000521667 B3GALNT1O75752 331 aa15.56■□□□□ 0.08
TRAPPC9-210ENST00000521667 LYL1P12980 280 aa15.56■□□□□ 0.08
TRAPPC9-210ENST00000521667 HOXA4Q00056 320 aaPredicted RBP15.56■□□□□ 0.08
TRAPPC9-210ENST00000521667 RAB32Q13637 225 aa15.56■□□□□ 0.08
TRAPPC9-210ENST00000521667 ZNF818PQ6ZRF7 136 aa15.56■□□□□ 0.08
TRAPPC9-210ENST00000521667 H1FOOQ8IZA3 346 aaPredicted RBP15.56■□□□□ 0.08
TRAPPC9-210ENST00000521667 LGI3Q8N145 548 aa15.56■□□□□ 0.08
TRAPPC9-210ENST00000521667 LRRC29Q8WV35 223 aa15.56■□□□□ 0.08
TRAPPC9-210ENST00000521667 GSX2Q9BZM3 304 aa15.56■□□□□ 0.08
TRAPPC9-210ENST00000521667 ITPR1Q14643 2758 aa15.56■□□□□ 0.08
TRAPPC9-210ENST00000521667 BCL2L11O43521 198 aa15.56■□□□□ 0.08
TRAPPC9-210ENST00000521667 PET100P0DJ07 73 aa15.56■□□□□ 0.08
TRAPPC9-210ENST00000521667 RAB14P61106 215 aa15.56■□□□□ 0.08
TRAPPC9-210ENST00000521667 IL1F10Q8WWZ1 152 aa15.56■□□□□ 0.08
TRAPPC9-210ENST00000521667 C18orf12Q96KH6 178 aa15.56■□□□□ 0.08
TRAPPC9-210ENST00000521667 TP53RKQ96S44 253 aa15.56■□□□□ 0.08
TRAPPC9-210ENST00000521667 OR2W1Q9Y3N9 320 aa15.56■□□□□ 0.08
TRAPPC9-210ENST00000521667 TMEM30CPA0ZSE6 113 aa15.55■□□□□ 0.08
TRAPPC9-210ENST00000521667 BEX5Q5H9J7 111 aa15.55■□□□□ 0.08
TRAPPC9-210ENST00000521667 TMEM108Q6UXF1 575 aa15.55■□□□□ 0.08
TRAPPC9-210ENST00000521667 TBC1D26Q86UD7 250 aa15.55■□□□□ 0.08
TRAPPC9-210ENST00000521667 CCL28Q9NRJ3 127 aa15.55■□□□□ 0.08
TRAPPC9-210ENST00000521667 FBXO9Q9UK97 447 aaPredicted RBP15.55■□□□□ 0.08
TRAPPC9-210ENST00000521667 LINC00862A6NCI5 91 aa15.55■□□□□ 0.08
TRAPPC9-210ENST00000521667 TUBAL3A6NHL2 446 aa15.55■□□□□ 0.08
TRAPPC9-210ENST00000521667 IFNL4K9M1U5 179 aa15.55■□□□□ 0.08
TRAPPC9-210ENST00000521667 SELENOVP59797 346 aa15.55■□□□□ 0.08
TRAPPC9-210ENST00000521667 UBA52P62987 128 aaKnown RBP15.55■□□□□ 0.08
TRAPPC9-210ENST00000521667 HMGN3Q15651 99 aa15.55■□□□□ 0.08
TRAPPC9-210ENST00000521667 LYZL2Q7Z4W2 148 aa15.55■□□□□ 0.08
TRAPPC9-210ENST00000521667 OR10Z1Q8NGY1 313 aa15.55■□□□□ 0.08
TRAPPC9-210ENST00000521667 SCARB1Q8WTV0 552 aa15.55■□□□□ 0.08
TRAPPC9-210ENST00000521667 MRPL37Q9BZE1 423 aaKnown RBP15.55■□□□□ 0.08
TRAPPC9-210ENST00000521667 OR5AC2Q9NZP5 309 aa15.55■□□□□ 0.08
TRAPPC9-210ENST00000521667 OR1A1Q9P1Q5 309 aa15.55■□□□□ 0.08
TRAPPC9-210ENST00000521667 HSD17B6O14756 317 aa15.54■□□□□ 0.08
TRAPPC9-210ENST00000521667 KCNAB3O43448 404 aa15.54■□□□□ 0.08
TRAPPC9-210ENST00000521667 SPDEFO95238 335 aa15.54■□□□□ 0.08
TRAPPC9-210ENST00000521667 S100A10P60903 97 aa15.54■□□□□ 0.08
TRAPPC9-210ENST00000521667 SRPXP78539 464 aa15.54■□□□□ 0.08
TRAPPC9-210ENST00000521667 SLC35E4Q6ICL7 350 aa15.54■□□□□ 0.08
TRAPPC9-210ENST00000521667 ALKAL2Q6UX46 152 aa15.54■□□□□ 0.08
TRAPPC9-210ENST00000521667 CMTM1Q8IZ96 169 aa15.54■□□□□ 0.08
TRAPPC9-210ENST00000521667 PRR18Q8N4B5 295 aa15.54■□□□□ 0.08
TRAPPC9-210ENST00000521667 NUP37Q8NFH4 326 aa15.54■□□□□ 0.08
TRAPPC9-210ENST00000521667 RND1Q92730 232 aa15.54■□□□□ 0.08
TRAPPC9-210ENST00000521667 MEGF10Q96KG7 1140 aa15.54■□□□□ 0.08
TRAPPC9-210ENST00000521667 OR2V2Q96R30 315 aa15.54■□□□□ 0.08
TRAPPC9-210ENST00000521667 TMEM222Q9H0R3 208 aa15.54■□□□□ 0.08
TRAPPC9-210ENST00000521667 SPRY3O43610 288 aa15.53■□□□□ 0.08
TRAPPC9-210ENST00000521667 PTAFRP25105 342 aa15.53■□□□□ 0.08
TRAPPC9-210ENST00000521667 CFHR2P36980 270 aa15.53■□□□□ 0.08
TRAPPC9-210ENST00000521667 SSX8Q7RTT4 187 aa15.53■□□□□ 0.08
TRAPPC9-210ENST00000521667 WFDC8Q8IUA0 241 aa15.53■□□□□ 0.08
TRAPPC9-210ENST00000521667 LHFPL5Q8TAF8 219 aa15.53■□□□□ 0.08
TRAPPC9-210ENST00000521667 PCNPQ8WW12 178 aaKnown RBP15.53■□□□□ 0.08
TRAPPC9-210ENST00000521667 VKORC1Q9BQB6 163 aa15.53■□□□□ 0.08
TRAPPC9-210ENST00000521667 TAF9BQ9HBM6 251 aa15.53■□□□□ 0.08
TRAPPC9-210ENST00000521667 ERRFI1Q9UJM3 462 aaPredicted RBP15.53■□□□□ 0.08
TRAPPC9-210ENST00000521667 SHANK1Q9Y566 2161 aa15.53■□□□□ 0.08
TRAPPC9-210ENST00000521667 ANKRD34BA5PLL1 514 aa15.53■□□□□ 0.08
TRAPPC9-210ENST00000521667 SRRM5B3KS81 715 aa15.53■□□□□ 0.08
TRAPPC9-210ENST00000521667 COL10A1Q03692 680 aa15.53■□□□□ 0.08
TRAPPC9-210ENST00000521667 MEX3BQ6ZN04 569 aaKnown RBP15.53■□□□□ 0.08
TRAPPC9-210ENST00000521667 FAM219AQ8IW50 185 aa15.53■□□□□ 0.08
TRAPPC9-210ENST00000521667 ST8SIA2Q92186 375 aa15.53■□□□□ 0.08
TRAPPC9-210ENST00000521667 RRNAD1Q96FB5 475 aaKnown RBP15.53■□□□□ 0.08
TRAPPC9-210ENST00000521667 CNTNAP3BQ96NU0 1288 aa15.53■□□□□ 0.08
TRAPPC9-210ENST00000521667 DMRTA2Q96SC8 542 aa15.53■□□□□ 0.08
TRAPPC9-210ENST00000521667 CNTNAP3Q9BZ76 1288 aa15.53■□□□□ 0.08
TRAPPC9-210ENST00000521667 KCNIP1Q9NZI2 227 aa15.53■□□□□ 0.08
TRAPPC9-210ENST00000521667 UBE2J1Q9Y385 318 aaPredicted RBP15.53■□□□□ 0.08
TRAPPC9-210ENST00000521667 TFF1P04155 84 aa15.52■□□□□ 0.08
TRAPPC9-210ENST00000521667 EGR1P18146 543 aa15.52■□□□□ 0.08
TRAPPC9-210ENST00000521667 NUP62P37198 522 aaPredicted RBP15.52■□□□□ 0.08
TRAPPC9-210ENST00000521667 OR3A1P47881 315 aa15.52■□□□□ 0.08
TRAPPC9-210ENST00000521667 C6orf183Q5T699 404 aa15.52■□□□□ 0.08
TRAPPC9-210ENST00000521667 OR1S1Q8NH92 325 aa15.52■□□□□ 0.08
TRAPPC9-210ENST00000521667 ARPC5LQ9BPX5 153 aa15.52■□□□□ 0.08
TRAPPC9-210ENST00000521667 TMED3Q9Y3Q3 217 aa15.52■□□□□ 0.08
TRAPPC9-210ENST00000521667 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.51■□□□□ 0.07
TRAPPC9-210ENST00000521667 HSPA12AO43301 675 aa15.51■□□□□ 0.07
TRAPPC9-210ENST00000521667 THBDP07204 575 aa15.51■□□□□ 0.07
TRAPPC9-210ENST00000521667 S100GP29377 79 aa15.51■□□□□ 0.07
TRAPPC9-210ENST00000521667 AESQ08117 197 aa15.51■□□□□ 0.07
TRAPPC9-210ENST00000521667 KLRB1Q12918 225 aa15.51■□□□□ 0.07
TRAPPC9-210ENST00000521667 SPRNQ5BIV9 151 aa15.51■□□□□ 0.07
TRAPPC9-210ENST00000521667 TMEM268Q5VZI3 342 aa15.51■□□□□ 0.07
TRAPPC9-210ENST00000521667 MOGAT3Q86VF5 341 aa15.51■□□□□ 0.07
TRAPPC9-210ENST00000521667 FAM90A1Q86YD7 464 aa15.51■□□□□ 0.07
TRAPPC9-210ENST00000521667 SLC35G3Q8N808 338 aa15.51■□□□□ 0.07
TRAPPC9-210ENST00000521667 BVESQ8NE79 360 aa15.51■□□□□ 0.07
TRAPPC9-210ENST00000521667 OR10V1Q8NGI7 309 aa15.51■□□□□ 0.07
TRAPPC9-210ENST00000521667 COQ2Q96H96 371 aa15.51■□□□□ 0.07
TRAPPC9-210ENST00000521667 TMEM56Q96MV1 263 aa15.51■□□□□ 0.07
TRAPPC9-210ENST00000521667 CITED4Q96RK1 184 aa15.51■□□□□ 0.07
TRAPPC9-210ENST00000521667 ZNF471Q9BX82 626 aaPredicted RBP15.51■□□□□ 0.07
TRAPPC9-210ENST00000521667 DNAJB11Q9UBS4 358 aa15.51■□□□□ 0.07
TRAPPC9-210ENST00000521667 KIF25Q9UIL4 384 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms