RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 JUNBP17275 347 aaPredicted RBP7.54□□□□□ -1.2
HDAC3-215ENST00000519474 IGFBP3P17936 291 aaPredicted RBP7.54□□□□□ -1.2
HDAC3-215ENST00000519474 C21orf33P30042 268 aaPredicted RBP7.54□□□□□ -1.2
HDAC3-215ENST00000519474 PTGFRP43088 359 aa7.54□□□□□ -1.2
HDAC3-215ENST00000519474 MTNR1BP49286 362 aa7.54□□□□□ -1.2
HDAC3-215ENST00000519474 DOC2BQ14184 412 aa7.54□□□□□ -1.2
HDAC3-215ENST00000519474 C17orf58Q2M2W7 97 aa7.54□□□□□ -1.2
HDAC3-215ENST00000519474 UTF1Q5T230 341 aa7.54□□□□□ -1.2
HDAC3-215ENST00000519474 DHRS7BQ6IAN0 325 aaPredicted RBP7.54□□□□□ -1.2
HDAC3-215ENST00000519474 BRICD5Q6PL45 260 aa7.54□□□□□ -1.2
HDAC3-215ENST00000519474 TREML4Q6UXN2 200 aa7.54□□□□□ -1.2
HDAC3-215ENST00000519474 ABHD12Q8N2K0 398 aa7.54□□□□□ -1.2
HDAC3-215ENST00000519474 ZFP41Q8N8Y5 198 aa7.54□□□□□ -1.2
HDAC3-215ENST00000519474 OR5T1Q8NG75 326 aa7.54□□□□□ -1.2
HDAC3-215ENST00000519474 OR13C5Q8NGS8 318 aa7.54□□□□□ -1.2
HDAC3-215ENST00000519474 OR10K1Q8NGX5 313 aa7.54□□□□□ -1.2
HDAC3-215ENST00000519474 TFAP2CQ92754 450 aa7.54□□□□□ -1.2
HDAC3-215ENST00000519474 BORCS5Q969J3 196 aa7.54□□□□□ -1.2
HDAC3-215ENST00000519474 TMEM106AQ96A25 262 aa7.54□□□□□ -1.2
HDAC3-215ENST00000519474 COQ2Q96H96 371 aa7.54□□□□□ -1.2
HDAC3-215ENST00000519474 TMEM133Q9H2Q1 129 aa7.54□□□□□ -1.2
HDAC3-215ENST00000519474 DCLRE1BQ9H816 532 aa7.54□□□□□ -1.2
HDAC3-215ENST00000519474 ING4Q9UNL4 249 aa7.54□□□□□ -1.2
HDAC3-215ENST00000519474 TENM1Q9UKZ4 2725 aa7.53□□□□□ -1.2
HDAC3-215ENST00000519474 IGHV2-26A0A0B4J1V2 119 aa7.53□□□□□ -1.2
HDAC3-215ENST00000519474 TRAV24A0A0B4J272 114 aa7.53□□□□□ -1.2
HDAC3-215ENST00000519474 A6NDX4 124 aa7.53□□□□□ -1.2
HDAC3-215ENST00000519474 CHST1O43916 411 aa7.53□□□□□ -1.2
HDAC3-215ENST00000519474 CDRT1O95170 752 aa7.53□□□□□ -1.2
HDAC3-215ENST00000519474 HTR3BO95264 441 aa7.53□□□□□ -1.2
HDAC3-215ENST00000519474 RAB3DO95716 219 aa7.53□□□□□ -1.2
HDAC3-215ENST00000519474 CSN2P05814 226 aa7.53□□□□□ -1.2
HDAC3-215ENST00000519474 CD2P06729 351 aa7.53□□□□□ -1.2
HDAC3-215ENST00000519474 STAG3L3P0CL85 134 aa7.53□□□□□ -1.2
HDAC3-215ENST00000519474 FAM189A2Q15884 450 aa7.53□□□□□ -1.2
HDAC3-215ENST00000519474 LBHQ53QV2 105 aaPredicted RBP7.53□□□□□ -1.2
HDAC3-215ENST00000519474 MINOS1Q5TGZ0 78 aa7.53□□□□□ -1.2
HDAC3-215ENST00000519474 PYHIN1Q6K0P9 492 aa7.53□□□□□ -1.2
HDAC3-215ENST00000519474 HEPN1Q6WQI6 88 aa7.53□□□□□ -1.2
HDAC3-215ENST00000519474 C8orf59Q8N0T1 100 aaPredicted RBP7.53□□□□□ -1.2
HDAC3-215ENST00000519474 NANOGP1Q8N7R0 232 aa7.53□□□□□ -1.2
HDAC3-215ENST00000519474 DTX3Q8N9I9 347 aa7.53□□□□□ -1.2
HDAC3-215ENST00000519474 CHST4Q8NCG5 386 aa7.53□□□□□ -1.2
HDAC3-215ENST00000519474 BPIFB6Q8NFQ5 453 aa7.53□□□□□ -1.2
HDAC3-215ENST00000519474 TNFAIP8L1Q8WVP5 186 aa7.53□□□□□ -1.2
HDAC3-215ENST00000519474 SMIM19Q96E16 107 aa7.53□□□□□ -1.2
HDAC3-215ENST00000519474 PGLYRP3Q96LB9 341 aa7.53□□□□□ -1.2
HDAC3-215ENST00000519474 GPER1Q99527 375 aa7.53□□□□□ -1.2
HDAC3-215ENST00000519474 TREM1Q9NP99 234 aa7.53□□□□□ -1.2
HDAC3-215ENST00000519474 TMEM138Q9NPI0 162 aa7.53□□□□□ -1.2
HDAC3-215ENST00000519474 ING3Q9NXR8 418 aa7.53□□□□□ -1.2
HDAC3-215ENST00000519474 CNOT2Q9NZN8 540 aaKnown RBP7.53□□□□□ -1.2
HDAC3-215ENST00000519474 ZNF581Q9P0T4 197 aa7.53□□□□□ -1.2
HDAC3-215ENST00000519474 HILPDAQ9Y5L2 63 aa7.53□□□□□ -1.2
HDAC3-215ENST00000519474 MINOS1-NBL1R4GNA1 71 aa7.53□□□□□ -1.2
HDAC3-215ENST00000519474 TRAV8-7A0A075B6U6 113 aa7.52□□□□□ -1.21
HDAC3-215ENST00000519474 TRGV10A0A0A0MS01 117 aa7.52□□□□□ -1.21
HDAC3-215ENST00000519474 TRBV5-7A0A0A0MS05 114 aa7.52□□□□□ -1.21
HDAC3-215ENST00000519474 A0A1W2PPK0 400 aa7.52□□□□□ -1.21
HDAC3-215ENST00000519474 ODAMA1E959 279 aa7.52□□□□□ -1.21
HDAC3-215ENST00000519474 RAB19A4D1S5 217 aa7.52□□□□□ -1.21
HDAC3-215ENST00000519474 FAM90A22PA8MWA6 464 aa7.52□□□□□ -1.21
HDAC3-215ENST00000519474 NUDT19A8MXV4 375 aa7.52□□□□□ -1.21
HDAC3-215ENST00000519474 PIN1P1O15428 100 aa7.52□□□□□ -1.21
HDAC3-215ENST00000519474 CCNKO75909 580 aa7.52□□□□□ -1.21
HDAC3-215ENST00000519474 SCAF4O95104 1147 aaKnown RBP7.52□□□□□ -1.21
HDAC3-215ENST00000519474 IGLV1-47P01700 117 aa7.52□□□□□ -1.21
HDAC3-215ENST00000519474 CD1AP06126 327 aa7.52□□□□□ -1.21
HDAC3-215ENST00000519474 MYL12AP19105 171 aa7.52□□□□□ -1.21
HDAC3-215ENST00000519474 CDK2P24941 298 aa7.52□□□□□ -1.21
HDAC3-215ENST00000519474 CD34P28906 385 aa7.52□□□□□ -1.21
HDAC3-215ENST00000519474 BDKRB2P30411 391 aa7.52□□□□□ -1.21
HDAC3-215ENST00000519474 ZNF93P35789 620 aaPredicted RBP7.52□□□□□ -1.21
HDAC3-215ENST00000519474 OR3A4PP47883 348 aa7.52□□□□□ -1.21
HDAC3-215ENST00000519474 DYNLT3P51808 116 aa7.52□□□□□ -1.21
HDAC3-215ENST00000519474 EFNB2P52799 333 aa7.52□□□□□ -1.21
HDAC3-215ENST00000519474 MED21Q13503 144 aa7.52□□□□□ -1.21
HDAC3-215ENST00000519474 RSU1Q15404 277 aa7.52□□□□□ -1.21
HDAC3-215ENST00000519474 PIGYQ3MUY2 71 aa7.52□□□□□ -1.21
HDAC3-215ENST00000519474 PLA1AQ53H76 456 aa7.52□□□□□ -1.21
HDAC3-215ENST00000519474 C6orf141Q5SZD1 244 aa7.52□□□□□ -1.21
HDAC3-215ENST00000519474 PRAMEF5Q5TYX0 476 aa7.52□□□□□ -1.21
HDAC3-215ENST00000519474 OR52W1Q6IF63 320 aa7.52□□□□□ -1.21
HDAC3-215ENST00000519474 UNQ9370/PRO34162Q6UXP9 181 aa7.52□□□□□ -1.21
HDAC3-215ENST00000519474 Q6ZS46 218 aa7.52□□□□□ -1.21
HDAC3-215ENST00000519474 TRAPPC6BQ86SZ2 158 aa7.52□□□□□ -1.21
HDAC3-215ENST00000519474 LYPD6Q86Y78 171 aa7.52□□□□□ -1.21
HDAC3-215ENST00000519474 OR4P4Q8NGL7 312 aa7.52□□□□□ -1.21
HDAC3-215ENST00000519474 PLPPR1Q8TBJ4 325 aa7.52□□□□□ -1.21
HDAC3-215ENST00000519474 NRG4Q8WWG1 115 aa7.52□□□□□ -1.21
HDAC3-215ENST00000519474 CDCA4Q9BXL8 241 aa7.52□□□□□ -1.21
HDAC3-215ENST00000519474 CLEC7AQ9BXN2 247 aa7.52□□□□□ -1.21
HDAC3-215ENST00000519474 METTL9Q9H1A3 318 aa7.52□□□□□ -1.21
HDAC3-215ENST00000519474 PPIL3Q9H2H8 161 aaKnown RBP7.52□□□□□ -1.21
HDAC3-215ENST00000519474 TCF7L1Q9HCS4 588 aa7.52□□□□□ -1.21
HDAC3-215ENST00000519474 SLC35D1Q9NTN3 355 aa7.52□□□□□ -1.21
HDAC3-215ENST00000519474 DPM3Q9P2X0 92 aa7.52□□□□□ -1.21
HDAC3-215ENST00000519474 TCF19Q9Y242 345 aa7.52□□□□□ -1.21
HDAC3-215ENST00000519474 PRELID3BQ9Y3B1 194 aa7.52□□□□□ -1.21
HDAC3-215ENST00000519474 KBTBD11-OT1A0A1B0GTJ5 212 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms