RNA–Protein interactions for RNA: ENST00000517730.5

PCM1-204, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 2,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-204ENST00000517730 NAT6Q93015 286 aa13.07□□□□□ -0.32
PCM1-204ENST00000517730 RSG1Q9BU20 258 aa13.07□□□□□ -0.32
PCM1-204ENST00000517730 TMEM106CQ9BVX2 250 aa13.07□□□□□ -0.32
PCM1-204ENST00000517730 MTIF3Q9H2K0 278 aaKnown RBP13.07□□□□□ -0.32
PCM1-204ENST00000517730 CFAP54Q96N23 3096 aa13.07□□□□□ -0.32
PCM1-204ENST00000517730 EYSQ5T1H1 3165 aa13.07□□□□□ -0.32
PCM1-204ENST00000517730 SLC22A20A6NK97 555 aa13.07□□□□□ -0.32
PCM1-204ENST00000517730 NPIPA2E9PIF3 369 aa13.07□□□□□ -0.32
PCM1-204ENST00000517730 NPIPA3F8WFD2 350 aa13.07□□□□□ -0.32
PCM1-204ENST00000517730 OR7C1O76099 320 aaPredicted RBP13.07□□□□□ -0.32
PCM1-204ENST00000517730 KBTBD11O94819 623 aa13.07□□□□□ -0.32
PCM1-204ENST00000517730 CNOT4O95628 575 aaKnown RBP13.07□□□□□ -0.32
PCM1-204ENST00000517730 CTXN2P0C2S0 81 aa13.07□□□□□ -0.32
PCM1-204ENST00000517730 S100GP29377 79 aa13.07□□□□□ -0.32
PCM1-204ENST00000517730 NUBP1P53384 320 aa13.07□□□□□ -0.32
PCM1-204ENST00000517730 CASP6P55212 293 aa13.07□□□□□ -0.32
PCM1-204ENST00000517730 PAX5Q02548 391 aa13.07□□□□□ -0.32
PCM1-204ENST00000517730 DEFB133Q30KQ1 61 aa13.07□□□□□ -0.32
PCM1-204ENST00000517730 TMEM41BQ5BJD5 291 aa13.07□□□□□ -0.32
PCM1-204ENST00000517730 FAM69BQ5VUD6 431 aa13.07□□□□□ -0.32
PCM1-204ENST00000517730 C17orf78Q8N4C9 275 aa13.07□□□□□ -0.32
PCM1-204ENST00000517730 TUSC2O75896 110 aa13.06□□□□□ -0.32
PCM1-204ENST00000517730 LCATP04180 440 aa13.06□□□□□ -0.32
PCM1-204ENST00000517730 JMJD7P0C870 316 aa13.06□□□□□ -0.32
PCM1-204ENST00000517730 ERVFC1-1P60608 527 aa13.06□□□□□ -0.32
PCM1-204ENST00000517730 RPS18P62269 152 aaKnown RBP13.06□□□□□ -0.32
PCM1-204ENST00000517730 DLX2Q07687 328 aaPredicted RBP13.06□□□□□ -0.32
PCM1-204ENST00000517730 P2RY6Q15077 328 aa13.06□□□□□ -0.32
PCM1-204ENST00000517730 NKAIN1Q4KMZ8 207 aa13.06□□□□□ -0.32
PCM1-204ENST00000517730 FADS6Q8N9I5 356 aa13.06□□□□□ -0.32
PCM1-204ENST00000517730 EXTL1Q92935 676 aa13.06□□□□□ -0.32
PCM1-204ENST00000517730 ULBP2Q9BZM5 246 aa13.06□□□□□ -0.32
PCM1-204ENST00000517730 PCDH15Q96QU1 1955 aa13.06□□□□□ -0.32
PCM1-204ENST00000517730 RTTNQ86VV8 2226 aa13.06□□□□□ -0.32
PCM1-204ENST00000517730 LAMA1P25391 3075 aa13.06□□□□□ -0.32
PCM1-204ENST00000517730 SHANK1Q9Y566 2161 aa13.06□□□□□ -0.32
PCM1-204ENST00000517730 IGLV3-12A0A075B6K2 115 aa13.06□□□□□ -0.32
PCM1-204ENST00000517730 MAP1LC3B2A6NCE7 125 aa13.06□□□□□ -0.32
PCM1-204ENST00000517730 SLC33A1O00400 549 aaPredicted RBP13.06□□□□□ -0.32
PCM1-204ENST00000517730 LINC01565O15544 149 aa13.06□□□□□ -0.32
PCM1-204ENST00000517730 SYNGR3O43761 229 aa13.06□□□□□ -0.32
PCM1-204ENST00000517730 NXPH3O95157 252 aa13.06□□□□□ -0.32
PCM1-204ENST00000517730 HRASP01112 189 aa13.06□□□□□ -0.32
PCM1-204ENST00000517730 CD55P08174 381 aa13.06□□□□□ -0.32
PCM1-204ENST00000517730 COX5BP10606 129 aa13.06□□□□□ -0.32
PCM1-204ENST00000517730 TUBG1P23258 451 aa13.06□□□□□ -0.32
PCM1-204ENST00000517730 IDH3GP51553 393 aaPredicted RBP13.06□□□□□ -0.32
PCM1-204ENST00000517730 FGF8P55075 233 aaPredicted RBP13.06□□□□□ -0.32
PCM1-204ENST00000517730 FOXL2P58012 376 aa13.06□□□□□ -0.32
PCM1-204ENST00000517730 OR1D5P58170 312 aa13.06□□□□□ -0.32
PCM1-204ENST00000517730 TMEM267Q0VDI3 215 aaPredicted RBP13.06□□□□□ -0.32
PCM1-204ENST00000517730 ACTL10Q5JWF8 245 aa13.06□□□□□ -0.32
PCM1-204ENST00000517730 OR1F12Q8NHA8 337 aa13.06□□□□□ -0.32
PCM1-204ENST00000517730 ZNF501Q96CX3 271 aaPredicted RBP13.06□□□□□ -0.32
PCM1-204ENST00000517730 R3HDM4Q96D70 268 aa13.06□□□□□ -0.32
PCM1-204ENST00000517730 ANAPC16Q96DE5 110 aa13.06□□□□□ -0.32
PCM1-204ENST00000517730 ZNF385AQ96PM9 386 aaKnown RBP13.06□□□□□ -0.32
PCM1-204ENST00000517730 SNHG12Q9BXW3 62 aa13.06□□□□□ -0.32
PCM1-204ENST00000517730 PARD6GQ9BYG4 376 aaPredicted RBP13.06□□□□□ -0.32
PCM1-204ENST00000517730 MAP1LC3BQ9GZQ8 125 aa13.06□□□□□ -0.32
PCM1-204ENST00000517730 RBKSQ9H477 322 aa13.06□□□□□ -0.32
PCM1-204ENST00000517730 SEMA5BQ9P283 1151 aa13.06□□□□□ -0.32
PCM1-204ENST00000517730 MYOTQ9UBF9 498 aa13.06□□□□□ -0.32
PCM1-204ENST00000517730 IGHV1OR21-1A0A087WYE8 117 aa13.05□□□□□ -0.32
PCM1-204ENST00000517730 KIR2DS1A0A191URI9 304 aa13.05□□□□□ -0.32
PCM1-204ENST00000517730 ZNF737O75373 536 aa13.05□□□□□ -0.32
PCM1-204ENST00000517730 ZFAND5O76080 213 aa13.05□□□□□ -0.32
PCM1-204ENST00000517730 SFTPCP11686 197 aa13.05□□□□□ -0.32
PCM1-204ENST00000517730 KIR2DS4P43632 304 aa13.05□□□□□ -0.32
PCM1-204ENST00000517730 KIR2DS1Q14954 304 aa13.05□□□□□ -0.32
PCM1-204ENST00000517730 SHHQ15465 462 aa13.05□□□□□ -0.32
PCM1-204ENST00000517730 MRPL41Q8IXM3 137 aaKnown RBP13.05□□□□□ -0.32
PCM1-204ENST00000517730 VSIRQ9H7M9 311 aa13.05□□□□□ -0.32
PCM1-204ENST00000517730 FGF21Q9NSA1 209 aa13.05□□□□□ -0.32
PCM1-204ENST00000517730 RALGAPA1Q6GYQ0 2036 aa13.05□□□□□ -0.32
PCM1-204ENST00000517730 B4E171 279 aa13.05□□□□□ -0.32
PCM1-204ENST00000517730 LMO7DNF2Z398 122 aa13.05□□□□□ -0.32
PCM1-204ENST00000517730 TMEM250H0YL14 139 aa13.05□□□□□ -0.32
PCM1-204ENST00000517730 FGF5P12034 268 aa13.05□□□□□ -0.32
PCM1-204ENST00000517730 TSPAN7P41732 249 aa13.05□□□□□ -0.32
PCM1-204ENST00000517730 ERVS71-1P61550 626 aa13.05□□□□□ -0.32
PCM1-204ENST00000517730 HBG1P69891 147 aa13.05□□□□□ -0.32
PCM1-204ENST00000517730 HBG2P69892 147 aa13.05□□□□□ -0.32
PCM1-204ENST00000517730 MEF2BQ02080 365 aaPredicted RBP13.05□□□□□ -0.32
PCM1-204ENST00000517730 PDCD1Q15116 288 aa13.05□□□□□ -0.32
PCM1-204ENST00000517730 LRRC75BQ2VPJ9 315 aa13.05□□□□□ -0.32
PCM1-204ENST00000517730 RHBDD2Q6NTF9 364 aa13.05□□□□□ -0.32
PCM1-204ENST00000517730 KMT5CQ86Y97 462 aa13.05□□□□□ -0.32
PCM1-204ENST00000517730 ZNF525Q8N782 197 aa13.05□□□□□ -0.32
PCM1-204ENST00000517730 CCL28Q9NRJ3 127 aa13.05□□□□□ -0.32
PCM1-204ENST00000517730 H3BP45 60 aa13.04□□□□□ -0.32
PCM1-204ENST00000517730 DUX1O43812 170 aa13.04□□□□□ -0.32
PCM1-204ENST00000517730 TYMSP04818 313 aa13.04□□□□□ -0.32
PCM1-204ENST00000517730 GZMHP20718 246 aa13.04□□□□□ -0.32
PCM1-204ENST00000517730 CLDN15P56746 228 aa13.04□□□□□ -0.32
PCM1-204ENST00000517730 RPL23P62829 140 aaKnown RBP13.04□□□□□ -0.32
PCM1-204ENST00000517730 PLCXD3Q63HM9 321 aa13.04□□□□□ -0.32
PCM1-204ENST00000517730 SSX7Q7RTT5 188 aa13.04□□□□□ -0.32
PCM1-204ENST00000517730 MRPL52Q86TS9 123 aaKnown RBP13.04□□□□□ -0.32
PCM1-204ENST00000517730 ZNF295-AS1Q8N0V1 137 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms