RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 Q9N2K0 584 aa8.1□□□□□ -1.11
CLN8-202ENST00000517514 DIABLOQ9NR28 239 aa8.1□□□□□ -1.11
CLN8-202ENST00000517514 EXTL2Q9UBQ6 330 aa8.1□□□□□ -1.11
CLN8-202ENST00000517514 ZNF230Q9UIE0 474 aaPredicted RBP8.1□□□□□ -1.11
CLN8-202ENST00000517514 UBE2J1Q9Y385 318 aaPredicted RBP8.1□□□□□ -1.11
CLN8-202ENST00000517514 CUBNO60494 3623 aa8.09□□□□□ -1.11
CLN8-202ENST00000517514 TEP1Q99973 2627 aaKnown RBP8.09□□□□□ -1.11
CLN8-202ENST00000517514 SONP18583 2426 aaKnown RBP8.09□□□□□ -1.11
CLN8-202ENST00000517514 IGKV1-6A0A0C4DH72 117 aa8.09□□□□□ -1.11
CLN8-202ENST00000517514 A0A0G2JMP0 313 aa8.09□□□□□ -1.11
CLN8-202ENST00000517514 A0A0X1KG70 313 aa8.09□□□□□ -1.11
CLN8-202ENST00000517514 KBTBD11-OT1A0A1B0GTJ5 212 aa8.09□□□□□ -1.11
CLN8-202ENST00000517514 A0A1W2PQ09 198 aa8.09□□□□□ -1.11
CLN8-202ENST00000517514 SERPINE3A8MV23 424 aa8.09□□□□□ -1.11
CLN8-202ENST00000517514 FAM25AB3EWG3 89 aa8.09□□□□□ -1.11
CLN8-202ENST00000517514 FAM25CB3EWG5 89 aa8.09□□□□□ -1.11
CLN8-202ENST00000517514 FAM25GB3EWG6 89 aa8.09□□□□□ -1.11
CLN8-202ENST00000517514 H3BUI4 141 aa8.09□□□□□ -1.11
CLN8-202ENST00000517514 M0R1W7 72 aa8.09□□□□□ -1.11
CLN8-202ENST00000517514 CLPXO76031 633 aa8.09□□□□□ -1.11
CLN8-202ENST00000517514 SCGNO76038 276 aa8.09□□□□□ -1.11
CLN8-202ENST00000517514 FCGR3AP08637 254 aa8.09□□□□□ -1.11
CLN8-202ENST00000517514 ZNF728P0DKX0 622 aa8.09□□□□□ -1.11
CLN8-202ENST00000517514 OMGP23515 440 aa8.09□□□□□ -1.11
CLN8-202ENST00000517514 GLP1RP43220 463 aa8.09□□□□□ -1.11
CLN8-202ENST00000517514 HMGN3Q15651 99 aa8.09□□□□□ -1.11
CLN8-202ENST00000517514 PNLIPRP3Q17RR3 467 aa8.09□□□□□ -1.11
CLN8-202ENST00000517514 TMEM69Q5SWH9 247 aa8.09□□□□□ -1.11
CLN8-202ENST00000517514 PRAMEF5Q5TYX0 476 aa8.09□□□□□ -1.11
CLN8-202ENST00000517514 GVQW1Q8N7I0 195 aa8.09□□□□□ -1.11
CLN8-202ENST00000517514 OR4M2Q8NGB6 313 aa8.09□□□□□ -1.11
CLN8-202ENST00000517514 OR1L1Q8NH94 360 aa8.09□□□□□ -1.11
CLN8-202ENST00000517514 MAFIPQ8WZ33 124 aa8.09□□□□□ -1.11
CLN8-202ENST00000517514 ZNF714Q96N38 554 aa8.09□□□□□ -1.11
CLN8-202ENST00000517514 UNKLQ9H9P5 680 aaKnown RBP8.09□□□□□ -1.11
CLN8-202ENST00000517514 TAS2R3Q9NYW6 316 aa8.09□□□□□ -1.11
CLN8-202ENST00000517514 CALYQ9NYX4 217 aa8.09□□□□□ -1.11
CLN8-202ENST00000517514 OR6C3Q9NZP0 311 aa8.09□□□□□ -1.11
CLN8-202ENST00000517514 ONECUT1Q9UBC0 465 aa8.09□□□□□ -1.11
CLN8-202ENST00000517514 LPAR3Q9UBY5 353 aa8.09□□□□□ -1.11
CLN8-202ENST00000517514 ANAPC10Q9UM13 185 aa8.09□□□□□ -1.11
CLN8-202ENST00000517514 KPTNQ9Y664 436 aa8.09□□□□□ -1.11
CLN8-202ENST00000517514 V9GYH0 126 aa8.09□□□□□ -1.11
CLN8-202ENST00000517514 TRGV10A0A0A0MS01 117 aa8.08□□□□□ -1.12
CLN8-202ENST00000517514 FUOMA2VDF0 154 aa8.08□□□□□ -1.12
CLN8-202ENST00000517514 ZNF729A6NN14 1252 aaPredicted RBP8.08□□□□□ -1.12
CLN8-202ENST00000517514 RNASEK-C17orf49H0YIS7 233 aa8.08□□□□□ -1.12
CLN8-202ENST00000517514 F2RL2O00254 374 aa8.08□□□□□ -1.12
CLN8-202ENST00000517514 CD3GP09693 182 aa8.08□□□□□ -1.12
CLN8-202ENST00000517514 HOXB4P17483 251 aaPredicted RBP8.08□□□□□ -1.12
CLN8-202ENST00000517514 PRTN3P24158 256 aa8.08□□□□□ -1.12
CLN8-202ENST00000517514 LOXL3P58215 753 aa8.08□□□□□ -1.12
CLN8-202ENST00000517514 KLRD1Q13241 179 aa8.08□□□□□ -1.12
CLN8-202ENST00000517514 HERPUD1Q15011 391 aa8.08□□□□□ -1.12
CLN8-202ENST00000517514 ZNF79Q15937 498 aa8.08□□□□□ -1.12
CLN8-202ENST00000517514 FAHD2BQ6P2I3 314 aaPredicted RBP8.08□□□□□ -1.12
CLN8-202ENST00000517514 HEPN1Q6WQI6 88 aa8.08□□□□□ -1.12
CLN8-202ENST00000517514 C1orf122Q6ZSJ8 110 aa8.08□□□□□ -1.12
CLN8-202ENST00000517514 Q71RC1 249 aaPredicted RBP8.08□□□□□ -1.12
CLN8-202ENST00000517514 VMO1Q7Z5L0 202 aa8.08□□□□□ -1.12
CLN8-202ENST00000517514 RFESDQ8TAC1 157 aa8.08□□□□□ -1.12
CLN8-202ENST00000517514 GPX8Q8TED1 209 aa8.08□□□□□ -1.12
CLN8-202ENST00000517514 SNAPC3Q92966 411 aa8.08□□□□□ -1.12
CLN8-202ENST00000517514 UPRTQ96BW1 309 aa8.08□□□□□ -1.12
CLN8-202ENST00000517514 FAHD2AQ96GK7 314 aa8.08□□□□□ -1.12
CLN8-202ENST00000517514 KIRREL1Q96J84 757 aa8.08□□□□□ -1.12
CLN8-202ENST00000517514 OCSTAMPQ9BR26 566 aa8.08□□□□□ -1.12
CLN8-202ENST00000517514 C7orf69Q9H7B7 122 aa8.08□□□□□ -1.12
CLN8-202ENST00000517514 TAF9BQ9HBM6 251 aa8.08□□□□□ -1.12
CLN8-202ENST00000517514 C12orf4Q9NQ89 552 aa8.08□□□□□ -1.12
CLN8-202ENST00000517514 SIRT7Q9NRC8 400 aa8.08□□□□□ -1.12
CLN8-202ENST00000517514 PTTG2Q9NZH5 202 aa8.08□□□□□ -1.12
CLN8-202ENST00000517514 ADAM30Q9UKF2 790 aa8.08□□□□□ -1.12
CLN8-202ENST00000517514 SOX21Q9Y651 276 aaPredicted RBP8.08□□□□□ -1.12
CLN8-202ENST00000517514 FN1P02751 2386 aaKnown RBP8.07□□□□□ -1.12
CLN8-202ENST00000517514 MEIS3P1A6NDR6 274 aa8.07□□□□□ -1.12
CLN8-202ENST00000517514 J3QLI3 93 aa8.07□□□□□ -1.12
CLN8-202ENST00000517514 ORC5O43913 435 aa8.07□□□□□ -1.12
CLN8-202ENST00000517514 TPPPO94811 219 aa8.07□□□□□ -1.12
CLN8-202ENST00000517514 TOX4O94842 621 aa8.07□□□□□ -1.12
CLN8-202ENST00000517514 HBZP02008 142 aa8.07□□□□□ -1.12
CLN8-202ENST00000517514 RBP4P02753 201 aa8.07□□□□□ -1.12
CLN8-202ENST00000517514 SCTP09683 121 aa8.07□□□□□ -1.12
CLN8-202ENST00000517514 IGHV1-8P0DP01 117 aa8.07□□□□□ -1.12
CLN8-202ENST00000517514 IGHV4-38-2P0DP08 117 aa8.07□□□□□ -1.12
CLN8-202ENST00000517514 NAT1P18440 290 aa8.07□□□□□ -1.12
CLN8-202ENST00000517514 GZMHP20718 246 aa8.07□□□□□ -1.12
CLN8-202ENST00000517514 GATA3P23771 443 aa8.07□□□□□ -1.12
CLN8-202ENST00000517514 DTYMKP23919 212 aa8.07□□□□□ -1.12
CLN8-202ENST00000517514 ETV6P41212 452 aa8.07□□□□□ -1.12
CLN8-202ENST00000517514 ARFRP1Q13795 201 aa8.07□□□□□ -1.12
CLN8-202ENST00000517514 GNMTQ14749 295 aa8.07□□□□□ -1.12
CLN8-202ENST00000517514 ARL6IP1Q15041 203 aa8.07□□□□□ -1.12
CLN8-202ENST00000517514 SRSF7Q16629 238 aaKnown RBP eCLIP8.07□□□□□ -1.12
CLN8-202ENST00000517514 LDLRAD2Q5SZI1 272 aa8.07□□□□□ -1.12
CLN8-202ENST00000517514 BTNL3Q6UXE8 466 aa8.07□□□□□ -1.12
CLN8-202ENST00000517514 CLEC9AQ6UXN8 241 aa8.07□□□□□ -1.12
CLN8-202ENST00000517514 ZNF782Q6ZMW2 699 aaPredicted RBP8.07□□□□□ -1.12
CLN8-202ENST00000517514 Q6ZS49 121 aa8.07□□□□□ -1.12
CLN8-202ENST00000517514 IL17RELQ6ZVW7 336 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms