RNA–Protein interactions for RNA: ENST00000516428.1

RNU4-54P-201, Transcript of RNA, U4 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU4-54P, Length 129 nt, Biotype snRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-54P-201ENST00000516428 hADV38S2A0JD32 116 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 IGSF23A1L1A6 192 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 TRAPPC13A5PLN9 417 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 RBFOX3A6NFN3 312 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 ARL5CA6NH57 179 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR4C46A6NHA9 309 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 RFPL4AA6NLU0 287 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR4C45A6NMZ5 311 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 BTNL10A8MVZ5 291 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 EVPLLA8MZ36 301 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 SHISA9B4DS77 424 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 EEF1E1-BLOC1S5C9J1V9 151 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 C9JQL5 133 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 C8orf87E5RJ46 101 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 RFPL4AL1F8VTS6 287 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 G3V2T6 193 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 KRTAP4-16G5E9R7 235 aaPredicted RBP0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 TMEM250H0YL14 139 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 H3BP45 60 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 J3QRK9 145 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 K7EQS6 105 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 DNASE2O00115 360 aaPredicted RBP0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 AIPO00170 330 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 UPK1AO00322 258 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 SOCS3O14543 225 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 FFAR1O14842 300 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 BET1O15155 118 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 HMGB3O15347 200 aaKnown RBP0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 GYG2O15488 501 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 ARPC5O15511 151 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 EEF1E1O43324 174 aaKnown RBP0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 TCF21O43680 179 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 PI15O43692 258 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 ANGPTL7O43827 346 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 ORC5O43913 435 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 PDE6DO43924 150 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 CST8O60676 142 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 EIF1BO60739 113 aaKnown RBP0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 CCDC22O60826 627 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 SPAG7O75391 227 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 CA11O75493 328 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 MED6O75586 246 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 GCM2O75603 506 aaPredicted RBP0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 SCO1O75880 301 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 SULT1C4O75897 302 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 ARL6IP5O75915 188 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 PIAS1O75925 651 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR2A4O95047 310 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 YIF1AO95070 293 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 CDRT1O95170 752 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 VENTXO95231 258 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 GADD45GO95257 159 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 SLC25A14O95258 325 aaPredicted RBP0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 NDUFC2O95298 119 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 GPR75O95800 540 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 EPPINO95925 133 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 FAM107AO95990 144 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 CCNE2O96020 404 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 CYB5R3P00387 301 aaPredicted RBP0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 MT-CO2P00403 227 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 CA2P00918 260 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 IGKV1D-16P01601 117 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 IGHMP01871 453 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 HBZP02008 142 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 APOA2P02652 100 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 APOC1P02654 83 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 C1QBP02746 253 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 AMBPP02760 352 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 IGKV3-11P04433 115 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 HLA-DPB1P04440 258 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 SERPINE1P05121 402 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 FABP3P05413 133 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 ATP5G1P05496 136 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 SERPINA7P05543 415 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 IGKV5-2P06315 115 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 DBIP07108 87 aaKnown RBP0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 PFN1P07737 140 aaKnown RBP0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 CECR9P0C854 216 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 FAM228BP0C875 321 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 PATE4P0C8F1 98 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 ZSCAN5DPP0CG00 497 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 DNAH10OSP0CZ25 163 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 ADRB3P13945 408 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 PLA2G2AP14555 144 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 GABRA1P14867 456 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 CRISP2P16562 243 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 ZNF708P17019 499 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 SPI1P17947 270 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 GPX2P18283 190 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 CXCL2P19875 107 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 CXCL3P19876 107 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 OGNP20774 298 aaKnown RBP0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 GABRR1P24046 479 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 ZBTB25P24278 435 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 IL3RAP26951 378 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 IMPA1P29218 277 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR10J1P30954 320 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 IL2RGP31785 369 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 PRSS3P35030 304 aa0.43□□□□□ -2.34
RNU4-54P-201ENST00000516428 PHBP35232 272 aa0.43□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms