RNA–Protein interactions for RNA: ENST00000515460.5

NUP54-218, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 849 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-218ENST00000515460 TBPL1P62380 186 aa4.67□□□□□ -1.66
NUP54-218ENST00000515460 RBBP4Q09028 425 aa4.67□□□□□ -1.66
NUP54-218ENST00000515460 ZNF763Q0D2J5 394 aa4.67□□□□□ -1.66
NUP54-218ENST00000515460 ST3GAL4Q11206 333 aa4.67□□□□□ -1.66
NUP54-218ENST00000515460 MEF2DQ14814 521 aa4.67□□□□□ -1.66
NUP54-218ENST00000515460 SPHARQ15513 63 aa4.67□□□□□ -1.66
NUP54-218ENST00000515460 ZSWIM7Q19AV6 140 aa4.67□□□□□ -1.66
NUP54-218ENST00000515460 DEFB110Q30KQ9 67 aa4.67□□□□□ -1.66
NUP54-218ENST00000515460 CT45A2Q5DJT8 189 aa4.67□□□□□ -1.66
NUP54-218ENST00000515460 SPANXN3Q5MJ09 141 aa4.67□□□□□ -1.66
NUP54-218ENST00000515460 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.67□□□□□ -1.66
NUP54-218ENST00000515460 FAAP20Q6NZ36 180 aa4.67□□□□□ -1.66
NUP54-218ENST00000515460 IGFL2Q6UWQ7 119 aa4.67□□□□□ -1.66
NUP54-218ENST00000515460 TMEM91Q6ZNR0 172 aa4.67□□□□□ -1.66
NUP54-218ENST00000515460 RTN4RL2Q86UN3 420 aa4.67□□□□□ -1.66
NUP54-218ENST00000515460 NIT1Q86X76 327 aa4.67□□□□□ -1.66
NUP54-218ENST00000515460 C20orf196Q8IYI0 205 aa4.67□□□□□ -1.66
NUP54-218ENST00000515460 ZADH2Q8N4Q0 377 aa4.67□□□□□ -1.66
NUP54-218ENST00000515460 HORMAD2Q8N7B1 307 aa4.67□□□□□ -1.66
NUP54-218ENST00000515460 ST6GALNAC3Q8NDV1 305 aa4.67□□□□□ -1.66
NUP54-218ENST00000515460 OR10G3Q8NGC4 313 aa4.67□□□□□ -1.66
NUP54-218ENST00000515460 OR5A2Q8NGI9 324 aa4.67□□□□□ -1.66
NUP54-218ENST00000515460 OR5D16Q8NGK9 328 aa4.67□□□□□ -1.66
NUP54-218ENST00000515460 OR2Y1Q8NGV0 311 aa4.67□□□□□ -1.66
NUP54-218ENST00000515460 STYXQ8WUJ0 223 aa4.67□□□□□ -1.66
NUP54-218ENST00000515460 SKA2Q8WVK7 121 aaPredicted RBP4.67□□□□□ -1.66
NUP54-218ENST00000515460 RAB40AQ8WXH6 277 aa4.67□□□□□ -1.66
NUP54-218ENST00000515460 NPIPB3Q92617 1050 aa4.67□□□□□ -1.66
NUP54-218ENST00000515460 TMEM106AQ96A25 262 aa4.67□□□□□ -1.66
NUP54-218ENST00000515460 IP6K3Q96PC2 410 aa4.67□□□□□ -1.66
NUP54-218ENST00000515460 ATF6BQ99941 703 aa4.67□□□□□ -1.66
NUP54-218ENST00000515460 CHRDL1Q9BU40 450 aa4.67□□□□□ -1.66
NUP54-218ENST00000515460 ZNF471Q9BX82 626 aaPredicted RBP4.67□□□□□ -1.66
NUP54-218ENST00000515460 RTN4RQ9BZR6 473 aa4.67□□□□□ -1.66
NUP54-218ENST00000515460 TMEM185BQ9H7F4 350 aa4.67□□□□□ -1.66
NUP54-218ENST00000515460 PLEKHA1Q9HB21 404 aa4.67□□□□□ -1.66
NUP54-218ENST00000515460 SDR39U1Q9NRG7 319 aaPredicted RBP4.67□□□□□ -1.66
NUP54-218ENST00000515460 TMEM38BQ9NVV0 291 aa4.67□□□□□ -1.66
NUP54-218ENST00000515460 NAT8Q9UHE5 227 aa4.67□□□□□ -1.66
NUP54-218ENST00000515460 RNF150Q9ULK6 438 aa4.67□□□□□ -1.66
NUP54-218ENST00000515460 C14orf166Q9Y224 244 aaKnown RBP4.67□□□□□ -1.66
NUP54-218ENST00000515460 LSM2Q9Y333 95 aaKnown RBP4.67□□□□□ -1.66
NUP54-218ENST00000515460 PTRH2Q9Y3E5 179 aaKnown RBP4.67□□□□□ -1.66
NUP54-218ENST00000515460 HEBP2Q9Y5Z4 205 aa4.67□□□□□ -1.66
NUP54-218ENST00000515460 PPIAL4EA0A075B759 164 aa4.66□□□□□ -1.66
NUP54-218ENST00000515460 PPIAL4CA0A0B4J2A2 164 aa4.66□□□□□ -1.66
NUP54-218ENST00000515460 TRBV5-4A0A0C4DH59 114 aa4.66□□□□□ -1.66
NUP54-218ENST00000515460 TRDV1A0A1B0GX56 115 aa4.66□□□□□ -1.66
NUP54-218ENST00000515460 TMEM235A6NFC5 223 aa4.66□□□□□ -1.66
NUP54-218ENST00000515460 OR5B21A6NL26 309 aa4.66□□□□□ -1.66
NUP54-218ENST00000515460 PPIAL4DF5H284 164 aa4.66□□□□□ -1.66
NUP54-218ENST00000515460 F8VVB4 439 aa4.66□□□□□ -1.66
NUP54-218ENST00000515460 F8VWA3 439 aa4.66□□□□□ -1.66
NUP54-218ENST00000515460 K7EQM0 130 aa4.66□□□□□ -1.66
NUP54-218ENST00000515460 RHODO00212 210 aa4.66□□□□□ -1.66
NUP54-218ENST00000515460 CCL22O00626 93 aa4.66□□□□□ -1.66
NUP54-218ENST00000515460 DHHO43323 396 aa4.66□□□□□ -1.66
NUP54-218ENST00000515460 ALOX12BO75342 701 aa4.66□□□□□ -1.66
NUP54-218ENST00000515460 SAP30O75446 220 aa4.66□□□□□ -1.66
NUP54-218ENST00000515460 UBL3O95164 117 aa4.66□□□□□ -1.66
NUP54-218ENST00000515460 CD8AP01732 235 aa4.66□□□□□ -1.66
NUP54-218ENST00000515460 CD74P04233 296 aa4.66□□□□□ -1.66
NUP54-218ENST00000515460 SEMG1P04279 462 aa4.66□□□□□ -1.66
NUP54-218ENST00000515460 CSF1P09603 554 aa4.66□□□□□ -1.66
NUP54-218ENST00000515460 RFPL3SP0C7P2 107 aa4.66□□□□□ -1.66
NUP54-218ENST00000515460 SLC35G6P0C7Q6 338 aa4.66□□□□□ -1.66
NUP54-218ENST00000515460 PPIAL4FP0DN26 164 aa4.66□□□□□ -1.66
NUP54-218ENST00000515460 PNMTP11086 282 aa4.66□□□□□ -1.66
NUP54-218ENST00000515460 NCK1P16333 377 aa4.66□□□□□ -1.66
NUP54-218ENST00000515460 AKR1C4P17516 323 aa4.66□□□□□ -1.66
NUP54-218ENST00000515460 PEBP1P30086 187 aaKnown RBP4.66□□□□□ -1.66
NUP54-218ENST00000515460 OR3A2P47893 321 aa4.66□□□□□ -1.66
NUP54-218ENST00000515460 POLR2HP52434 150 aaKnown RBP4.66□□□□□ -1.66
NUP54-218ENST00000515460 PNLIPRP1P54315 467 aa4.66□□□□□ -1.66
NUP54-218ENST00000515460 PIGPP57054 158 aa4.66□□□□□ -1.66
NUP54-218ENST00000515460 RPL23AP62750 156 aaKnown RBP4.66□□□□□ -1.66
NUP54-218ENST00000515460 HIST1H3AP68431 136 aa4.66□□□□□ -1.66
NUP54-218ENST00000515460 Q0VFX4 171 aa4.66□□□□□ -1.66
NUP54-218ENST00000515460 ZNF154Q13106 437 aa4.66□□□□□ -1.66
NUP54-218ENST00000515460 VAMP3Q15836 100 aa4.66□□□□□ -1.66
NUP54-218ENST00000515460 VWA2Q5GFL6 755 aa4.66□□□□□ -1.66
NUP54-218ENST00000515460 PIK3CD-AS1Q5SR53 167 aa4.66□□□□□ -1.66
NUP54-218ENST00000515460 LYPLAL1Q5VWZ2 237 aa4.66□□□□□ -1.66
NUP54-218ENST00000515460 OLFML2AQ68BL7 652 aa4.66□□□□□ -1.66
NUP54-218ENST00000515460 GLT8D1Q68CQ7 371 aa4.66□□□□□ -1.66
NUP54-218ENST00000515460 FAM71F2Q6NXP2 309 aa4.66□□□□□ -1.66
NUP54-218ENST00000515460 RPL22L1Q6P5R6 122 aaKnown RBP4.66□□□□□ -1.66
NUP54-218ENST00000515460 PRSS54Q6PEW0 395 aa4.66□□□□□ -1.66
NUP54-218ENST00000515460 TEX38Q6PEX7 206 aa4.66□□□□□ -1.66
NUP54-218ENST00000515460 LCTLQ6UWM7 567 aa4.66□□□□□ -1.66
NUP54-218ENST00000515460 PIANPQ8IYJ0 282 aa4.66□□□□□ -1.66
NUP54-218ENST00000515460 LGI3Q8N145 548 aa4.66□□□□□ -1.66
NUP54-218ENST00000515460 CLDN19Q8N6F1 224 aa4.66□□□□□ -1.66
NUP54-218ENST00000515460 CLEC1AQ8NC01 280 aa4.66□□□□□ -1.66
NUP54-218ENST00000515460 OR2AK2Q8NG84 335 aa4.66□□□□□ -1.66
NUP54-218ENST00000515460 OR9K2Q8NGE7 335 aa4.66□□□□□ -1.66
NUP54-218ENST00000515460 OR5AR1Q8NGP9 310 aa4.66□□□□□ -1.66
NUP54-218ENST00000515460 OR1P1Q8NH06 330 aa4.66□□□□□ -1.66
NUP54-218ENST00000515460 OR51Q1Q8NH59 317 aa4.66□□□□□ -1.66
NUP54-218ENST00000515460 ISOC2Q96AB3 205 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms