RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 LINC00574Q9H8X3 128 aa17.28■□□□□ 0.36
LSM6-207ENST00000515311 SCPEP1Q9HB40 452 aa17.28■□□□□ 0.36
LSM6-207ENST00000515311 HIF1ANQ9NWT6 349 aa17.28■□□□□ 0.36
LSM6-207ENST00000515311 MGAT4AQ9UM21 535 aa17.28■□□□□ 0.36
LSM6-207ENST00000515311 MAST4O15021 2626 aa17.27■□□□□ 0.36
LSM6-207ENST00000515311 ZNF729A6NN14 1252 aaPredicted RBP17.27■□□□□ 0.36
LSM6-207ENST00000515311 M0R1W7 72 aa17.27■□□□□ 0.36
LSM6-207ENST00000515311 ORC5O43913 435 aa17.27■□□□□ 0.36
LSM6-207ENST00000515311 TGFAP01135 160 aa17.27■□□□□ 0.36
LSM6-207ENST00000515311 INHBBP09529 407 aa17.27■□□□□ 0.36
LSM6-207ENST00000515311 CGB3P0DN86 165 aa17.27■□□□□ 0.36
LSM6-207ENST00000515311 CGB7P0DN87 165 aa17.27■□□□□ 0.36
LSM6-207ENST00000515311 DLX6P56179 175 aa17.27■□□□□ 0.36
LSM6-207ENST00000515311 MRPS10P82664 201 aaKnown RBP17.27■□□□□ 0.36
LSM6-207ENST00000515311 IL18Q14116 193 aa17.27■□□□□ 0.36
LSM6-207ENST00000515311 DCAF12L2Q5VW00 463 aa17.27■□□□□ 0.36
LSM6-207ENST00000515311 C1orf122Q6ZSJ8 110 aa17.27■□□□□ 0.36
LSM6-207ENST00000515311 MRGPRDQ8TDS7 321 aa17.27■□□□□ 0.36
LSM6-207ENST00000515311 OCSTAMPQ9BR26 566 aa17.27■□□□□ 0.36
LSM6-207ENST00000515311 Q9N2K0 584 aa17.27■□□□□ 0.36
LSM6-207ENST00000515311 KPTNQ9Y664 436 aa17.27■□□□□ 0.36
LSM6-207ENST00000515311 V9GYH0 126 aa17.27■□□□□ 0.36
LSM6-207ENST00000515311 ABCA1O95477 2261 aa17.27■□□□□ 0.35
LSM6-207ENST00000515311 ACANP16112 2415 aa17.27■□□□□ 0.35
LSM6-207ENST00000515311 WNK2Q9Y3S1 2297 aa17.26■□□□□ 0.35
LSM6-207ENST00000515311 KBTBD11-OT1A0A1B0GTJ5 212 aa17.26■□□□□ 0.35
LSM6-207ENST00000515311 SULT1C2O00338 296 aa17.26■□□□□ 0.35
LSM6-207ENST00000515311 CTDSPLO15194 276 aa17.26■□□□□ 0.35
LSM6-207ENST00000515311 LPLP06858 475 aa17.26■□□□□ 0.35
LSM6-207ENST00000515311 PTHLHP12272 177 aa17.26■□□□□ 0.35
LSM6-207ENST00000515311 ZNF16P17020 682 aaPredicted RBP17.26■□□□□ 0.35
LSM6-207ENST00000515311 RCC1P18754 421 aaPredicted RBP17.26■□□□□ 0.35
LSM6-207ENST00000515311 CBX5P45973 191 aa17.26■□□□□ 0.35
LSM6-207ENST00000515311 MADCAM1Q13477 382 aa17.26■□□□□ 0.35
LSM6-207ENST00000515311 FAM131AQ6UXB0 335 aa17.26■□□□□ 0.35
LSM6-207ENST00000515311 Q6ZS49 121 aa17.26■□□□□ 0.35
LSM6-207ENST00000515311 RAB9BQ9NP90 201 aa17.26■□□□□ 0.35
LSM6-207ENST00000515311 KCNIP1Q9NZI2 227 aa17.26■□□□□ 0.35
LSM6-207ENST00000515311 ONECUT1Q9UBC0 465 aa17.26■□□□□ 0.35
LSM6-207ENST00000515311 ZNF469Q96JG9 3925 aaPredicted RBP17.26■□□□□ 0.35
LSM6-207ENST00000515311 TRAV39A0A0B4J263 110 aa17.25■□□□□ 0.35
LSM6-207ENST00000515311 hCG_1809904A0A1W2PP81 198 aa17.25■□□□□ 0.35
LSM6-207ENST00000515311 A0A1W2PPE2 198 aa17.25■□□□□ 0.35
LSM6-207ENST00000515311 A0A1W2PR64 198 aa17.25■□□□□ 0.35
LSM6-207ENST00000515311 A0A1W2PRV1 198 aa17.25■□□□□ 0.35
LSM6-207ENST00000515311 MEX3AA1L020 520 aaKnown RBP17.25■□□□□ 0.35
LSM6-207ENST00000515311 C17orf98A8MV24 154 aa17.25■□□□□ 0.35
LSM6-207ENST00000515311 J3QLI3 93 aa17.25■□□□□ 0.35
LSM6-207ENST00000515311 CD99P14209 185 aa17.25■□□□□ 0.35
LSM6-207ENST00000515311 CCL3L1P16619 93 aa17.25■□□□□ 0.35
LSM6-207ENST00000515311 GUCA2AQ02747 115 aa17.25■□□□□ 0.35
LSM6-207ENST00000515311 PAX8Q06710 450 aa17.25■□□□□ 0.35
LSM6-207ENST00000515311 KRTAP1-1Q07627 177 aa17.25■□□□□ 0.35
LSM6-207ENST00000515311 SETD6Q8TBK2 473 aa17.25■□□□□ 0.35
LSM6-207ENST00000515311 GPX8Q8TED1 209 aa17.25■□□□□ 0.35
LSM6-207ENST00000515311 GCDHQ92947 438 aaPredicted RBP17.25■□□□□ 0.35
LSM6-207ENST00000515311 CALYQ9NYX4 217 aa17.25■□□□□ 0.35
LSM6-207ENST00000515311 HIVEP1P15822 2718 aa17.24■□□□□ 0.35
LSM6-207ENST00000515311 MEIOCA2RUB1 952 aa17.24■□□□□ 0.35
LSM6-207ENST00000515311 C12orf77C9JDV5 145 aa17.24■□□□□ 0.35
LSM6-207ENST00000515311 NPIPB11E5RHQ5 1161 aa17.24■□□□□ 0.35
LSM6-207ENST00000515311 C15orf65H3BRN8 121 aa17.24■□□□□ 0.35
LSM6-207ENST00000515311 CD5LO43866 347 aa17.24■□□□□ 0.35
LSM6-207ENST00000515311 SSTR5P35346 364 aa17.24■□□□□ 0.35
LSM6-207ENST00000515311 HMGN3Q15651 99 aa17.24■□□□□ 0.35
LSM6-207ENST00000515311 C17orf58Q2M2W7 97 aa17.24■□□□□ 0.35
LSM6-207ENST00000515311 METTL11BQ5VVY1 283 aa17.24■□□□□ 0.35
LSM6-207ENST00000515311 HEPN1Q6WQI6 88 aa17.24■□□□□ 0.35
LSM6-207ENST00000515311 TAF9BQ9HBM6 251 aa17.24■□□□□ 0.35
LSM6-207ENST00000515311 ANAPC10Q9UM13 185 aa17.24■□□□□ 0.35
LSM6-207ENST00000515311 GABARAPH6UMI1 98 aa17.23■□□□□ 0.35
LSM6-207ENST00000515311 SPINT2O43291 252 aa17.23■□□□□ 0.35
LSM6-207ENST00000515311 KIR2DS4P43632 304 aa17.23■□□□□ 0.35
LSM6-207ENST00000515311 ARF6P62330 175 aa17.23■□□□□ 0.35
LSM6-207ENST00000515311 HLA-DRB3P79483 266 aa17.23■□□□□ 0.35
LSM6-207ENST00000515311 ZNF45Q02386 682 aa17.23■□□□□ 0.35
LSM6-207ENST00000515311 KIR2DS1Q14954 304 aa17.23■□□□□ 0.35
LSM6-207ENST00000515311 TMEM30BQ3MIR4 351 aa17.23■□□□□ 0.35
LSM6-207ENST00000515311 C11orf42Q8N5U0 333 aa17.23■□□□□ 0.35
LSM6-207ENST00000515311 Q8N7P7 452 aa17.23■□□□□ 0.35
LSM6-207ENST00000515311 OR10A7Q8NGE5 316 aa17.23■□□□□ 0.35
LSM6-207ENST00000515311 SMIM4Q8WVI0 70 aa17.23■□□□□ 0.35
LSM6-207ENST00000515311 FCAMRQ8WWV6 532 aa17.23■□□□□ 0.35
LSM6-207ENST00000515311 ARL11Q969Q4 196 aa17.23■□□□□ 0.35
LSM6-207ENST00000515311 SIRPDQ9H106 197 aa17.23■□□□□ 0.35
LSM6-207ENST00000515311 METTL8Q9H825 291 aaKnown RBP17.23■□□□□ 0.35
LSM6-207ENST00000515311 UNKLQ9H9P5 680 aaKnown RBP17.23■□□□□ 0.35
LSM6-207ENST00000515311 AKIP1Q9NQ31 210 aa17.23■□□□□ 0.35
LSM6-207ENST00000515311 ZNF230Q9UIE0 474 aaPredicted RBP17.23■□□□□ 0.35
LSM6-207ENST00000515311 TRDCB7Z8K6 153 aa17.22■□□□□ 0.35
LSM6-207ENST00000515311 GSTZ1O43708 216 aaPredicted RBP17.22■□□□□ 0.35
LSM6-207ENST00000515311 MMP9P14780 707 aa17.22■□□□□ 0.35
LSM6-207ENST00000515311 ZNF79Q15937 498 aa17.22■□□□□ 0.35
LSM6-207ENST00000515311 HOGA1Q86XE5 327 aa17.22■□□□□ 0.35
LSM6-207ENST00000515311 S100ZQ8WXG8 99 aa17.22■□□□□ 0.35
LSM6-207ENST00000515311 ST6GALNAC5Q9BVH7 336 aa17.22■□□□□ 0.35
LSM6-207ENST00000515311 ZNF286AQ9HBT8 521 aa17.22■□□□□ 0.35
LSM6-207ENST00000515311 IFT46Q9NQC8 304 aa17.22■□□□□ 0.35
LSM6-207ENST00000515311 F2RL2O00254 374 aa17.21■□□□□ 0.35
LSM6-207ENST00000515311 HBZP02008 142 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms