RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 LTC4SQ16873 150 aa8.33□□□□□ -1.08
HMGXB3-205ENST00000514469 SLC22A6Q4U2R8 563 aa8.33□□□□□ -1.08
HMGXB3-205ENST00000514469 ABCA11PQ4W5N1 156 aa8.33□□□□□ -1.08
HMGXB3-205ENST00000514469 ZNF497Q6ZNH5 498 aa8.33□□□□□ -1.08
HMGXB3-205ENST00000514469 AHSA2Q719I0 299 aa8.33□□□□□ -1.08
HMGXB3-205ENST00000514469 LYPD6Q86Y78 171 aa8.33□□□□□ -1.08
HMGXB3-205ENST00000514469 THNSL2Q86YJ6 484 aa8.33□□□□□ -1.08
HMGXB3-205ENST00000514469 CDH26Q8IXH8 852 aa8.33□□□□□ -1.08
HMGXB3-205ENST00000514469 OR4F17Q8NGA8 305 aa8.33□□□□□ -1.08
HMGXB3-205ENST00000514469 OR5AU1Q8NGC0 362 aa8.33□□□□□ -1.08
HMGXB3-205ENST00000514469 RFESDQ8TAC1 157 aa8.33□□□□□ -1.08
HMGXB3-205ENST00000514469 MUL1Q969V5 352 aa8.33□□□□□ -1.08
HMGXB3-205ENST00000514469 OR4F4Q96R69 305 aa8.33□□□□□ -1.08
HMGXB3-205ENST00000514469 MRPS28Q9Y2Q9 187 aaKnown RBP8.33□□□□□ -1.08
HMGXB3-205ENST00000514469 MOB4Q9Y3A3 225 aa8.33□□□□□ -1.08
HMGXB3-205ENST00000514469 WNK1Q9H4A3 2382 aa8.32□□□□□ -1.08
HMGXB3-205ENST00000514469 SH2D7A6NKC9 451 aaPredicted RBP8.32□□□□□ -1.08
HMGXB3-205ENST00000514469 ORC5O43913 435 aa8.32□□□□□ -1.08
HMGXB3-205ENST00000514469 LPLP06858 475 aa8.32□□□□□ -1.08
HMGXB3-205ENST00000514469 SNRNP70P08621 437 aaKnown RBP8.32□□□□□ -1.08
HMGXB3-205ENST00000514469 FAM106CPP0CH98 169 aa8.32□□□□□ -1.08
HMGXB3-205ENST00000514469 CELP19835 753 aa8.32□□□□□ -1.08
HMGXB3-205ENST00000514469 GZMHP20718 246 aa8.32□□□□□ -1.08
HMGXB3-205ENST00000514469 DIAPH2-AS1Q14236 149 aa8.32□□□□□ -1.08
HMGXB3-205ENST00000514469 TCTEX1D4Q5JR98 221 aa8.32□□□□□ -1.08
HMGXB3-205ENST00000514469 ATAD3CQ5T2N8 411 aa8.32□□□□□ -1.08
HMGXB3-205ENST00000514469 AWAT2Q6E213 333 aa8.32□□□□□ -1.08
HMGXB3-205ENST00000514469 GLIPR1L1Q6UWM5 242 aa8.32□□□□□ -1.08
HMGXB3-205ENST00000514469 OR8H3Q8N146 312 aa8.32□□□□□ -1.08
HMGXB3-205ENST00000514469 GAPTQ8N292 157 aa8.32□□□□□ -1.08
HMGXB3-205ENST00000514469 STX19Q8N4C7 294 aa8.32□□□□□ -1.08
HMGXB3-205ENST00000514469 JAGN1Q8N5M9 183 aa8.32□□□□□ -1.08
HMGXB3-205ENST00000514469 DRAM1Q8N682 238 aa8.32□□□□□ -1.08
HMGXB3-205ENST00000514469 NANOGP1Q8N7R0 232 aa8.32□□□□□ -1.08
HMGXB3-205ENST00000514469 NKAIN3Q8N8D7 197 aa8.32□□□□□ -1.08
HMGXB3-205ENST00000514469 C8orf31Q8N9H6 132 aa8.32□□□□□ -1.08
HMGXB3-205ENST00000514469 BPIFB6Q8NFQ5 453 aa8.32□□□□□ -1.08
HMGXB3-205ENST00000514469 OR52M1Q8NGK5 317 aa8.32□□□□□ -1.08
HMGXB3-205ENST00000514469 OR56B4Q8NH76 319 aa8.32□□□□□ -1.08
HMGXB3-205ENST00000514469 THRSPQ92748 146 aa8.32□□□□□ -1.08
HMGXB3-205ENST00000514469 TFAP2CQ92754 450 aa8.32□□□□□ -1.08
HMGXB3-205ENST00000514469 R3HDM4Q96D70 268 aa8.32□□□□□ -1.08
HMGXB3-205ENST00000514469 MRPS24Q96EL2 167 aaKnown RBP8.32□□□□□ -1.08
HMGXB3-205ENST00000514469 SPACA1Q9HBV2 294 aa8.32□□□□□ -1.08
HMGXB3-205ENST00000514469 A0A1W2PPK0 400 aa8.31□□□□□ -1.08
HMGXB3-205ENST00000514469 FAM90A10PA6NDY2 464 aa8.31□□□□□ -1.08
HMGXB3-205ENST00000514469 FAM90A7PA6NKC0 464 aa8.31□□□□□ -1.08
HMGXB3-205ENST00000514469 FAM90A23PA8MXZ1 464 aa8.31□□□□□ -1.08
HMGXB3-205ENST00000514469 AIPO00170 330 aa8.31□□□□□ -1.08
HMGXB3-205ENST00000514469 HSD17B6O14756 317 aa8.31□□□□□ -1.08
HMGXB3-205ENST00000514469 PIN1P1O15428 100 aa8.31□□□□□ -1.08
HMGXB3-205ENST00000514469 FGF16O43320 207 aa8.31□□□□□ -1.08
HMGXB3-205ENST00000514469 MT-ND4P03905 459 aa8.31□□□□□ -1.08
HMGXB3-205ENST00000514469 MAS1P04201 325 aa8.31□□□□□ -1.08
HMGXB3-205ENST00000514469 MAPK3P27361 379 aaPredicted RBP8.31□□□□□ -1.08
HMGXB3-205ENST00000514469 LOXL3P58215 753 aa8.31□□□□□ -1.08
HMGXB3-205ENST00000514469 ZNF816Q0VGE8 651 aaPredicted RBP8.31□□□□□ -1.08
HMGXB3-205ENST00000514469 Q3ZCU0 254 aa8.31□□□□□ -1.08
HMGXB3-205ENST00000514469 RNLSQ5VYX0 342 aa8.31□□□□□ -1.08
HMGXB3-205ENST00000514469 LINC00311Q8N616 119 aa8.31□□□□□ -1.08
HMGXB3-205ENST00000514469 C5orf56Q8N8D9 126 aa8.31□□□□□ -1.08
HMGXB3-205ENST00000514469 OR10X1Q8NGY0 326 aa8.31□□□□□ -1.08
HMGXB3-205ENST00000514469 NEK7Q8TDX7 302 aa8.31□□□□□ -1.08
HMGXB3-205ENST00000514469 ARL11Q969Q4 196 aa8.31□□□□□ -1.08
HMGXB3-205ENST00000514469 Q96M66 194 aa8.31□□□□□ -1.08
HMGXB3-205ENST00000514469 VCXQ9H320 206 aa8.31□□□□□ -1.08
HMGXB3-205ENST00000514469 GFOD1Q9NXC2 390 aa8.31□□□□□ -1.08
HMGXB3-205ENST00000514469 A0A1W2PPE3 182 aa8.3□□□□□ -1.08
HMGXB3-205ENST00000514469 C12orf77C9JDV5 145 aa8.3□□□□□ -1.08
HMGXB3-205ENST00000514469 MCRIP1C9JLW8 97 aa8.3□□□□□ -1.08
HMGXB3-205ENST00000514469 SDCBPO00560 298 aaPredicted RBP8.3□□□□□ -1.08
HMGXB3-205ENST00000514469 SC5DO75845 299 aa8.3□□□□□ -1.08
HMGXB3-205ENST00000514469 CDK1P06493 297 aa8.3□□□□□ -1.08
HMGXB3-205ENST00000514469 MGMTP16455 207 aa8.3□□□□□ -1.08
HMGXB3-205ENST00000514469 TMEM11P17152 192 aa8.3□□□□□ -1.08
HMGXB3-205ENST00000514469 EBI3Q14213 229 aa8.3□□□□□ -1.08
HMGXB3-205ENST00000514469 TMEM30BQ3MIR4 351 aa8.3□□□□□ -1.08
HMGXB3-205ENST00000514469 RAB12Q6IQ22 244 aa8.3□□□□□ -1.08
HMGXB3-205ENST00000514469 C10orf99Q6UWK7 81 aa8.3□□□□□ -1.08
HMGXB3-205ENST00000514469 CENPVQ7Z7K6 275 aaPredicted RBP8.3□□□□□ -1.08
HMGXB3-205ENST00000514469 IZUMO1Q8IYV9 350 aa8.3□□□□□ -1.08
HMGXB3-205ENST00000514469 ZNF439Q8NDP4 499 aa8.3□□□□□ -1.08
HMGXB3-205ENST00000514469 TMEM104Q8NE00 496 aa8.3□□□□□ -1.08
HMGXB3-205ENST00000514469 OR4X2Q8NGF9 303 aa8.3□□□□□ -1.08
HMGXB3-205ENST00000514469 UBALD1Q8TB05 177 aa8.3□□□□□ -1.08
HMGXB3-205ENST00000514469 CCDC107Q8WV48 283 aa8.3□□□□□ -1.08
HMGXB3-205ENST00000514469 MYDGFQ969H8 173 aa8.3□□□□□ -1.08
HMGXB3-205ENST00000514469 UQCC2Q9BRT2 126 aa8.3□□□□□ -1.08
HMGXB3-205ENST00000514469 MND1Q9BWT6 205 aa8.3□□□□□ -1.08
HMGXB3-205ENST00000514469 DCLRE1BQ9H816 532 aa8.3□□□□□ -1.08
HMGXB3-205ENST00000514469 ETAA1Q9NY74 926 aa8.3□□□□□ -1.08
HMGXB3-205ENST00000514469 ERGIC3Q9Y282 383 aa8.3□□□□□ -1.08
HMGXB3-205ENST00000514469 LSM2Q9Y333 95 aaKnown RBP8.3□□□□□ -1.08
HMGXB3-205ENST00000514469 TSSC4Q9Y5U2 329 aaPredicted RBP8.3□□□□□ -1.08
HMGXB3-205ENST00000514469 IGHV3-43A0A0B4J1X8 118 aa8.29□□□□□ -1.08
HMGXB3-205ENST00000514469 IGHV1-3A0A0C4DH29 117 aa8.29□□□□□ -1.08
HMGXB3-205ENST00000514469 A0A1W2PRX2 142 aa8.29□□□□□ -1.08
HMGXB3-205ENST00000514469 TCRBV4S1A1TA0A5B7 111 aa8.29□□□□□ -1.08
HMGXB3-205ENST00000514469 ANKRD65E5RJM6 399 aa8.29□□□□□ -1.08
HMGXB3-205ENST00000514469 CCRL2O00421 344 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms