RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 KIRREL1Q96J84 757 aa12.58□□□□□ -0.4
VCAN-211ENST00000513984 MEGF10Q96KG7 1140 aa12.58□□□□□ -0.4
VCAN-211ENST00000513984 OR2V2Q96R30 315 aa12.58□□□□□ -0.4
VCAN-211ENST00000513984 RNF126Q9BV68 326 aa12.58□□□□□ -0.4
VCAN-211ENST00000513984 SLC5A7Q9GZV3 580 aa12.58□□□□□ -0.4
VCAN-211ENST00000513984 SEBOXQ9HB31 216 aaPredicted RBP12.58□□□□□ -0.4
VCAN-211ENST00000513984 OR2W1Q9Y3N9 320 aa12.58□□□□□ -0.4
VCAN-211ENST00000513984 TMEM30CPA0ZSE6 113 aa12.57□□□□□ -0.4
VCAN-211ENST00000513984 ERVH48-1M5A8F1 160 aa12.57□□□□□ -0.4
VCAN-211ENST00000513984 IFNA21P01568 189 aa12.57□□□□□ -0.4
VCAN-211ENST00000513984 GATA4P43694 442 aa12.57□□□□□ -0.4
VCAN-211ENST00000513984 GGNBP1Q5YKI7 109 aa12.57□□□□□ -0.4
VCAN-211ENST00000513984 SLC51BQ86UW2 128 aa12.57□□□□□ -0.4
VCAN-211ENST00000513984 C18orf12Q96KH6 178 aa12.57□□□□□ -0.4
VCAN-211ENST00000513984 DSCAMO60469 2012 aa12.56□□□□□ -0.4
VCAN-211ENST00000513984 TRAV39A0A0B4J263 110 aa12.56□□□□□ -0.4
VCAN-211ENST00000513984 C3orf85A0A1B0GTC6 90 aa12.56□□□□□ -0.4
VCAN-211ENST00000513984 H0YIZ8 118 aa12.56□□□□□ -0.4
VCAN-211ENST00000513984 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.56□□□□□ -0.4
VCAN-211ENST00000513984 EGR1P18146 543 aa12.56□□□□□ -0.4
VCAN-211ENST00000513984 AP2S1P53680 142 aaPredicted RBP12.56□□□□□ -0.4
VCAN-211ENST00000513984 PAX5Q02548 391 aa12.56□□□□□ -0.4
VCAN-211ENST00000513984 IAH1Q2TAA2 248 aaPredicted RBP12.56□□□□□ -0.4
VCAN-211ENST00000513984 PRSS54Q6PEW0 395 aa12.56□□□□□ -0.4
VCAN-211ENST00000513984 WFDC8Q8IUA0 241 aa12.56□□□□□ -0.4
VCAN-211ENST00000513984 LGI3Q8N145 548 aa12.56□□□□□ -0.4
VCAN-211ENST00000513984 OR8H3Q8N146 312 aa12.56□□□□□ -0.4
VCAN-211ENST00000513984 TP53RKQ96S44 253 aa12.56□□□□□ -0.4
VCAN-211ENST00000513984 CACNA1DQ01668 2161 aa12.56□□□□□ -0.4
VCAN-211ENST00000513984 DSCAML1Q8TD84 2053 aa12.56□□□□□ -0.4
VCAN-211ENST00000513984 RPS10-NUDT3A0A1W2PQS6 291 aa12.55□□□□□ -0.4
VCAN-211ENST00000513984 DPRXA6NFQ7 191 aa12.55□□□□□ -0.4
VCAN-211ENST00000513984 PHF1O43189 567 aaPredicted RBP12.55□□□□□ -0.4
VCAN-211ENST00000513984 B3GALNT1O75752 331 aa12.55□□□□□ -0.4
VCAN-211ENST00000513984 PET100P0DJ07 73 aa12.55□□□□□ -0.4
VCAN-211ENST00000513984 CA7P43166 264 aa12.55□□□□□ -0.4
VCAN-211ENST00000513984 OR3A1P47881 315 aa12.55□□□□□ -0.4
VCAN-211ENST00000513984 CASP6P55212 293 aa12.55□□□□□ -0.4
VCAN-211ENST00000513984 SRPXP78539 464 aa12.55□□□□□ -0.4
VCAN-211ENST00000513984 COL10A1Q03692 680 aa12.55□□□□□ -0.4
VCAN-211ENST00000513984 RAB32Q13637 225 aa12.55□□□□□ -0.4
VCAN-211ENST00000513984 SPRNQ5BIV9 151 aa12.55□□□□□ -0.4
VCAN-211ENST00000513984 TBC1D26Q86UD7 250 aa12.55□□□□□ -0.4
VCAN-211ENST00000513984 GCSAMQ8N6F7 178 aa12.55□□□□□ -0.4
VCAN-211ENST00000513984 INO80EQ8NBZ0 244 aaPredicted RBP12.55□□□□□ -0.4
VCAN-211ENST00000513984 ST6GALNAC3Q8NDV1 305 aa12.55□□□□□ -0.4
VCAN-211ENST00000513984 ITLN1Q8WWA0 313 aa12.55□□□□□ -0.4
VCAN-211ENST00000513984 COQ2Q96H96 371 aa12.55□□□□□ -0.4
VCAN-211ENST00000513984 TMEM222Q9H0R3 208 aa12.55□□□□□ -0.4
VCAN-211ENST00000513984 CCL28Q9NRJ3 127 aa12.55□□□□□ -0.4
VCAN-211ENST00000513984 OR1A1Q9P1Q5 309 aa12.55□□□□□ -0.4
VCAN-211ENST00000513984 FBXO9Q9UK97 447 aaPredicted RBP12.55□□□□□ -0.4
VCAN-211ENST00000513984 DYSFO75923 2080 aa12.55□□□□□ -0.4
VCAN-211ENST00000513984 TRGV8A0A0C4DH27 118 aa12.55□□□□□ -0.4
VCAN-211ENST00000513984 ABCD4O14678 606 aa12.55□□□□□ -0.4
VCAN-211ENST00000513984 BCL2L11O43521 198 aa12.55□□□□□ -0.4
VCAN-211ENST00000513984 SPRY3O43610 288 aa12.55□□□□□ -0.4
VCAN-211ENST00000513984 C1QTNF9P0C862 333 aa12.55□□□□□ -0.4
VCAN-211ENST00000513984 CLLU1Q5K131 121 aa12.55□□□□□ -0.4
VCAN-211ENST00000513984 LILRB1Q8NHL6 650 aaPredicted RBP12.55□□□□□ -0.4
VCAN-211ENST00000513984 LHFPL5Q8TAF8 219 aa12.55□□□□□ -0.4
VCAN-211ENST00000513984 IL1F10Q8WWZ1 152 aa12.55□□□□□ -0.4
VCAN-211ENST00000513984 DCUN1D4Q92564 292 aa12.55□□□□□ -0.4
VCAN-211ENST00000513984 TAF9BQ9HBM6 251 aa12.55□□□□□ -0.4
VCAN-211ENST00000513984 METRNQ9UJH8 293 aa12.55□□□□□ -0.4
VCAN-211ENST00000513984 TANC2Q9HCD6 1990 aa12.55□□□□□ -0.4
VCAN-211ENST00000513984 ARID1AO14497 2285 aa12.54□□□□□ -0.4
VCAN-211ENST00000513984 KANTRA0A1W2PQU2 76 aa12.54□□□□□ -0.4
VCAN-211ENST00000513984 TUBAL3A6NHL2 446 aa12.54□□□□□ -0.4
VCAN-211ENST00000513984 LHBP01229 141 aa12.54□□□□□ -0.4
VCAN-211ENST00000513984 PSG2P11465 335 aa12.54□□□□□ -0.4
VCAN-211ENST00000513984 BSPH1Q075Z2 132 aa12.54□□□□□ -0.4
VCAN-211ENST00000513984 LYZL2Q7Z4W2 148 aa12.54□□□□□ -0.4
VCAN-211ENST00000513984 MOGAT3Q86VF5 341 aa12.54□□□□□ -0.4
VCAN-211ENST00000513984 CMTM1Q8IZ96 169 aa12.54□□□□□ -0.4
VCAN-211ENST00000513984 CD177Q8N6Q3 437 aa12.54□□□□□ -0.4
VCAN-211ENST00000513984 BVESQ8NE79 360 aa12.54□□□□□ -0.4
VCAN-211ENST00000513984 OR10V1Q8NGI7 309 aa12.54□□□□□ -0.4
VCAN-211ENST00000513984 TMEM56Q96MV1 263 aa12.54□□□□□ -0.4
VCAN-211ENST00000513984 OR5AC2Q9NZP5 309 aa12.54□□□□□ -0.4
VCAN-211ENST00000513984 GSKIPQ9P0R6 139 aa12.54□□□□□ -0.4
VCAN-211ENST00000513984 IL19Q9UHD0 177 aa12.54□□□□□ -0.4
VCAN-211ENST00000513984 KIF25Q9UIL4 384 aa12.54□□□□□ -0.4
VCAN-211ENST00000513984 ERRFI1Q9UJM3 462 aaPredicted RBP12.54□□□□□ -0.4
VCAN-211ENST00000513984 ZDHHC8Q9ULC8 765 aa12.54□□□□□ -0.4
VCAN-211ENST00000513984 TMEM56-RWDD3S4R434 201 aa12.54□□□□□ -0.4
VCAN-211ENST00000513984 SPTA1P02549 2419 aa12.54□□□□□ -0.4
VCAN-211ENST00000513984 RAI1Q7Z5J4 1906 aaPredicted RBP12.54□□□□□ -0.4
VCAN-211ENST00000513984 OOEPA6NGQ2 149 aa12.53□□□□□ -0.4
VCAN-211ENST00000513984 HSD17B6O14756 317 aa12.53□□□□□ -0.4
VCAN-211ENST00000513984 ZNF737O75373 536 aa12.53□□□□□ -0.4
VCAN-211ENST00000513984 IGHV1-46P01743 117 aa12.53□□□□□ -0.4
VCAN-211ENST00000513984 TFF1P04155 84 aa12.53□□□□□ -0.4
VCAN-211ENST00000513984 HEXAP06865 529 aa12.53□□□□□ -0.4
VCAN-211ENST00000513984 WNT2P09544 360 aa12.53□□□□□ -0.4
VCAN-211ENST00000513984 PRDX2P32119 198 aa12.53□□□□□ -0.4
VCAN-211ENST00000513984 ASCL1P50553 236 aa12.53□□□□□ -0.4
VCAN-211ENST00000513984 UBA52P62987 128 aaKnown RBP12.53□□□□□ -0.4
VCAN-211ENST00000513984 AESQ08117 197 aa12.53□□□□□ -0.4
VCAN-211ENST00000513984 TESK1Q15569 626 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms