RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 RAP2AP10114 183 aa8.39□□□□□ -1.07
DDX41-216ENST00000513562 IL3RAP26951 378 aa8.39□□□□□ -1.07
DDX41-216ENST00000513562 KCNJ3P48549 501 aa8.39□□□□□ -1.07
DDX41-216ENST00000513562 AADACL4Q5VUY2 407 aa8.39□□□□□ -1.07
DDX41-216ENST00000513562 SATL1Q86VE3 508 aa8.39□□□□□ -1.07
DDX41-216ENST00000513562 HS3ST5Q8IZT8 346 aa8.39□□□□□ -1.07
DDX41-216ENST00000513562 OR52M1Q8NGK5 317 aa8.39□□□□□ -1.07
DDX41-216ENST00000513562 PLPPR1Q8TBJ4 325 aa8.39□□□□□ -1.07
DDX41-216ENST00000513562 RNF166Q96A37 237 aaPredicted RBP8.39□□□□□ -1.07
DDX41-216ENST00000513562 FGGYQ96C11 551 aa8.39□□□□□ -1.07
DDX41-216ENST00000513562 NEK6Q9HC98 313 aa8.39□□□□□ -1.07
DDX41-216ENST00000513562 PARP11Q9NR21 331 aa8.39□□□□□ -1.07
DDX41-216ENST00000513562 IGHV7-81A0A0B4J1V7 117 aa8.38□□□□□ -1.07
DDX41-216ENST00000513562 TRAV39A0A0B4J263 110 aa8.38□□□□□ -1.07
DDX41-216ENST00000513562 A0A1W2PQL4 384 aaPredicted RBP8.38□□□□□ -1.07
DDX41-216ENST00000513562 C12orf77C9JDV5 145 aa8.38□□□□□ -1.07
DDX41-216ENST00000513562 SOX15O60248 233 aa8.38□□□□□ -1.07
DDX41-216ENST00000513562 SULT1C4O75897 302 aa8.38□□□□□ -1.07
DDX41-216ENST00000513562 ZNF20P17024 532 aa8.38□□□□□ -1.07
DDX41-216ENST00000513562 VHLP40337 213 aa8.38□□□□□ -1.07
DDX41-216ENST00000513562 ZNF137PP52743 207 aa8.38□□□□□ -1.07
DDX41-216ENST00000513562 MMDQ15546 238 aa8.38□□□□□ -1.07
DDX41-216ENST00000513562 C19orf54Q5BKX5 351 aa8.38□□□□□ -1.07
DDX41-216ENST00000513562 NXNL2Q5VZ03 156 aa8.38□□□□□ -1.07
DDX41-216ENST00000513562 DHFR2Q86XF0 187 aa8.38□□□□□ -1.07
DDX41-216ENST00000513562 ANKRD13BQ86YJ7 626 aa8.38□□□□□ -1.07
DDX41-216ENST00000513562 CNIH3Q8TBE1 160 aa8.38□□□□□ -1.07
DDX41-216ENST00000513562 TBX5Q99593 518 aa8.38□□□□□ -1.07
DDX41-216ENST00000513562 ELAC2Q9BQ52 826 aaKnown RBP8.38□□□□□ -1.07
DDX41-216ENST00000513562 FAM110AQ9BQ89 295 aa8.38□□□□□ -1.07
DDX41-216ENST00000513562 THAP7Q9BT49 309 aaPredicted RBP8.38□□□□□ -1.07
DDX41-216ENST00000513562 ELOVL1Q9BW60 279 aa8.38□□□□□ -1.07
DDX41-216ENST00000513562 HIPK2Q9H2X6 1198 aa8.38□□□□□ -1.07
DDX41-216ENST00000513562 NDE1Q9NXR1 346 aa8.38□□□□□ -1.07
DDX41-216ENST00000513562 KMT2AQ03164 3969 aa8.37□□□□□ -1.07
DDX41-216ENST00000513562 C15orf65H3BRN8 121 aa8.37□□□□□ -1.07
DDX41-216ENST00000513562 M0R129 80 aa8.37□□□□□ -1.07
DDX41-216ENST00000513562 SDCBPO00560 298 aaPredicted RBP8.37□□□□□ -1.07
DDX41-216ENST00000513562 ARPC1BO15143 372 aaKnown RBP8.37□□□□□ -1.07
DDX41-216ENST00000513562 LY6G6CO95867 125 aa8.37□□□□□ -1.07
DDX41-216ENST00000513562 HSPB1P04792 205 aaKnown RBP8.37□□□□□ -1.07
DDX41-216ENST00000513562 ISG15P05161 165 aa8.37□□□□□ -1.07
DDX41-216ENST00000513562 OCM2P0CE71 109 aa8.37□□□□□ -1.07
DDX41-216ENST00000513562 OCMP0CE72 109 aaPredicted RBP8.37□□□□□ -1.07
DDX41-216ENST00000513562 DBTP11182 482 aaKnown RBP8.37□□□□□ -1.07
DDX41-216ENST00000513562 ANXA8P13928 327 aa8.37□□□□□ -1.07
DDX41-216ENST00000513562 PRKACGP22612 351 aa8.37□□□□□ -1.07
DDX41-216ENST00000513562 BLVRBP30043 206 aaPredicted RBP8.37□□□□□ -1.07
DDX41-216ENST00000513562 MNAT1P51948 309 aa8.37□□□□□ -1.07
DDX41-216ENST00000513562 CRISP1P54107 249 aa8.37□□□□□ -1.07
DDX41-216ENST00000513562 IL13RA2Q14627 380 aa8.37□□□□□ -1.07
DDX41-216ENST00000513562 Q3ZCU0 254 aa8.37□□□□□ -1.07
DDX41-216ENST00000513562 TMEM244Q5VVB8 128 aa8.37□□□□□ -1.07
DDX41-216ENST00000513562 RNLSQ5VYX0 342 aa8.37□□□□□ -1.07
DDX41-216ENST00000513562 ELP2Q6IA86 826 aa8.37□□□□□ -1.07
DDX41-216ENST00000513562 OR13C9Q8NGT0 318 aa8.37□□□□□ -1.07
DDX41-216ENST00000513562 FLYWCH2Q96CP2 140 aaKnown RBP8.37□□□□□ -1.07
DDX41-216ENST00000513562 RSRP1Q9BUV0 290 aa8.37□□□□□ -1.07
DDX41-216ENST00000513562 TUBA4BQ9H853 241 aa8.37□□□□□ -1.07
DDX41-216ENST00000513562 FAM118AQ9NWS6 357 aa8.37□□□□□ -1.07
DDX41-216ENST00000513562 GFOD1Q9NXC2 390 aa8.37□□□□□ -1.07
DDX41-216ENST00000513562 TAGLN3Q9UI15 199 aa8.37□□□□□ -1.07
DDX41-216ENST00000513562 MYRFQ9Y2G1 1151 aa8.37□□□□□ -1.07
DDX41-216ENST00000513562 SLC31A2O15432 143 aa8.36□□□□□ -1.07
DDX41-216ENST00000513562 OR2T7P0C7T2 308 aa8.36□□□□□ -1.07
DDX41-216ENST00000513562 TMEM225BP0DP42 221 aa8.36□□□□□ -1.07
DDX41-216ENST00000513562 GZMHP20718 246 aa8.36□□□□□ -1.07
DDX41-216ENST00000513562 CRIP2P52943 208 aaPredicted RBP8.36□□□□□ -1.07
DDX41-216ENST00000513562 EFNB1P98172 346 aa8.36□□□□□ -1.07
DDX41-216ENST00000513562 NDPQ00604 133 aa8.36□□□□□ -1.07
DDX41-216ENST00000513562 MS4A2Q01362 244 aa8.36□□□□□ -1.07
DDX41-216ENST00000513562 LSAMPQ13449 338 aa8.36□□□□□ -1.07
DDX41-216ENST00000513562 PTGES3Q15185 160 aaKnown RBP8.36□□□□□ -1.07
DDX41-216ENST00000513562 LINC00322Q6ZN03 302 aaPredicted RBP8.36□□□□□ -1.07
DDX41-216ENST00000513562 SLC25A48Q6ZT89 311 aaKnown RBP8.36□□□□□ -1.07
DDX41-216ENST00000513562 GID4Q8IVV7 300 aa8.36□□□□□ -1.07
DDX41-216ENST00000513562 ZNF439Q8NDP4 499 aa8.36□□□□□ -1.07
DDX41-216ENST00000513562 TMEM163Q8TC26 289 aa8.36□□□□□ -1.07
DDX41-216ENST00000513562 CASTOR1Q8WTX7 329 aa8.36□□□□□ -1.07
DDX41-216ENST00000513562 UTP4Q969X6 686 aaKnown RBP8.36□□□□□ -1.07
DDX41-216ENST00000513562 LRGUKQ96M69 825 aa8.36□□□□□ -1.07
DDX41-216ENST00000513562 NR1H4Q96RI1 486 aaPredicted RBP8.36□□□□□ -1.07
DDX41-216ENST00000513562 TMED9Q9BVK6 235 aa8.36□□□□□ -1.07
DDX41-216ENST00000513562 PRRG3Q9BZD7 231 aa8.36□□□□□ -1.07
DDX41-216ENST00000513562 H2AFY2Q9P0M6 372 aaPredicted RBP8.36□□□□□ -1.07
DDX41-216ENST00000513562 FOXA2Q9Y261 457 aaPredicted RBP8.36□□□□□ -1.07
DDX41-216ENST00000513562 IGHV3-43A0A0B4J1X8 118 aa8.35□□□□□ -1.07
DDX41-216ENST00000513562 A0A1W2PN81 502 aa8.35□□□□□ -1.07
DDX41-216ENST00000513562 GNGT2O14610 69 aa8.35□□□□□ -1.07
DDX41-216ENST00000513562 IGHV3-43DP0DP04 118 aa8.35□□□□□ -1.07
DDX41-216ENST00000513562 CHRNA7P36544 502 aa8.35□□□□□ -1.07
DDX41-216ENST00000513562 ACTBP60709 375 aa8.35□□□□□ -1.07
DDX41-216ENST00000513562 RAB40BQ12829 278 aa8.35□□□□□ -1.07
DDX41-216ENST00000513562 TRIM25Q14258 630 aaKnown RBP8.35□□□□□ -1.07
DDX41-216ENST00000513562 KISS1Q15726 138 aa8.35□□□□□ -1.07
DDX41-216ENST00000513562 ECSCRQ19T08 205 aa8.35□□□□□ -1.07
DDX41-216ENST00000513562 GTSCR1Q86UQ5 136 aa8.35□□□□□ -1.07
DDX41-216ENST00000513562 ADGRG5Q8IZF4 528 aa8.35□□□□□ -1.07
DDX41-216ENST00000513562 TCTEX1D1Q8N7M0 179 aa8.35□□□□□ -1.07
DDX41-216ENST00000513562 TCEANCQ8N8B7 351 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms