RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 FLYWCH2Q96CP2 140 aaKnown RBP2.76□□□□□ -1.97
PDLIM5-218ENST00000513341 REEP6Q96HR9 211 aa2.76□□□□□ -1.97
PDLIM5-218ENST00000513341 TSSK2Q96PF2 358 aa2.76□□□□□ -1.97
PDLIM5-218ENST00000513341 OR8B4Q96RC9 309 aa2.76□□□□□ -1.97
PDLIM5-218ENST00000513341 PAPOLGQ9BWT3 736 aaKnown RBP2.76□□□□□ -1.97
PDLIM5-218ENST00000513341 TEX12Q9BXU0 123 aa2.76□□□□□ -1.97
PDLIM5-218ENST00000513341 ROPN1BQ9BZX4 212 aaPredicted RBP2.76□□□□□ -1.97
PDLIM5-218ENST00000513341 C20orf27Q9GZN8 174 aa2.76□□□□□ -1.97
PDLIM5-218ENST00000513341 ABCG5Q9H222 651 aa2.76□□□□□ -1.97
PDLIM5-218ENST00000513341 ROPN1Q9HAT0 212 aaPredicted RBP2.76□□□□□ -1.97
PDLIM5-218ENST00000513341 GLS2Q9UI32 602 aa2.76□□□□□ -1.97
PDLIM5-218ENST00000513341 LINC00527Q9UJ94 153 aa2.76□□□□□ -1.97
PDLIM5-218ENST00000513341 STUB1Q9UNE7 303 aa2.76□□□□□ -1.97
PDLIM5-218ENST00000513341 SIGLEC7Q9Y286 467 aa2.76□□□□□ -1.97
PDLIM5-218ENST00000513341 MRPS28Q9Y2Q9 187 aaKnown RBP2.76□□□□□ -1.97
PDLIM5-218ENST00000513341 IER3IP1Q9Y5U9 82 aa2.76□□□□□ -1.97
PDLIM5-218ENST00000513341 WSB1Q9Y6I7 421 aa2.76□□□□□ -1.97
PDLIM5-218ENST00000513341 PKHD1P08F94 4074 aa2.75□□□□□ -1.97
PDLIM5-218ENST00000513341 A0A087WUU8 490 aa2.75□□□□□ -1.97
PDLIM5-218ENST00000513341 FUOMA2VDF0 154 aa2.75□□□□□ -1.97
PDLIM5-218ENST00000513341 C15orf62A8K5M9 175 aa2.75□□□□□ -1.97
PDLIM5-218ENST00000513341 ZNF878C9JN71 531 aa2.75□□□□□ -1.97
PDLIM5-218ENST00000513341 LINC01619G3V211 115 aa2.75□□□□□ -1.97
PDLIM5-218ENST00000513341 CDC42EP2O14613 210 aa2.75□□□□□ -1.97
PDLIM5-218ENST00000513341 ZNF737O75373 536 aa2.75□□□□□ -1.97
PDLIM5-218ENST00000513341 SPAG7O75391 227 aa2.75□□□□□ -1.97
PDLIM5-218ENST00000513341 DEDDO75618 318 aa2.75□□□□□ -1.97
PDLIM5-218ENST00000513341 CDK2AP2O75956 126 aa2.75□□□□□ -1.97
PDLIM5-218ENST00000513341 KDM4BO94953 1096 aa2.75□□□□□ -1.97
PDLIM5-218ENST00000513341 CNIH1O95406 144 aa2.75□□□□□ -1.97
PDLIM5-218ENST00000513341 TFF1P04155 84 aa2.75□□□□□ -1.97
PDLIM5-218ENST00000513341 PIPP12273 146 aaPredicted RBP2.75□□□□□ -1.97
PDLIM5-218ENST00000513341 ATP6V1B1P15313 513 aa2.75□□□□□ -1.97
PDLIM5-218ENST00000513341 ANXA7P20073 488 aaKnown RBP2.75□□□□□ -1.97
PDLIM5-218ENST00000513341 VDAC1P21796 283 aa2.75□□□□□ -1.97
PDLIM5-218ENST00000513341 OR1E2P47887 323 aa2.75□□□□□ -1.97
PDLIM5-218ENST00000513341 RAB7AP51149 207 aa2.75□□□□□ -1.97
PDLIM5-218ENST00000513341 RAB9AP51151 201 aa2.75□□□□□ -1.97
PDLIM5-218ENST00000513341 PRKXP51817 358 aa2.75□□□□□ -1.97
PDLIM5-218ENST00000513341 BLVRAP53004 296 aa2.75□□□□□ -1.97
PDLIM5-218ENST00000513341 EDDM3BP56851 147 aa2.75□□□□□ -1.97
PDLIM5-218ENST00000513341 ERVK11-1P61568 191 aa2.75□□□□□ -1.97
PDLIM5-218ENST00000513341 SELENOWP63302 87 aa2.75□□□□□ -1.97
PDLIM5-218ENST00000513341 PITPNAQ00169 270 aa2.75□□□□□ -1.97
PDLIM5-218ENST00000513341 GABPB1Q06547 395 aaPredicted RBP2.75□□□□□ -1.97
PDLIM5-218ENST00000513341 TNFRSF9Q07011 255 aa2.75□□□□□ -1.97
PDLIM5-218ENST00000513341 EIF2B1Q14232 305 aaKnown RBP2.75□□□□□ -1.97
PDLIM5-218ENST00000513341 HES1Q14469 280 aa2.75□□□□□ -1.97
PDLIM5-218ENST00000513341 CYP51A1Q16850 503 aa2.75□□□□□ -1.97
PDLIM5-218ENST00000513341 WHAMMP3Q1A5X7 153 aa2.75□□□□□ -1.97
PDLIM5-218ENST00000513341 HLA-DRB5Q30154 266 aa2.75□□□□□ -1.97
PDLIM5-218ENST00000513341 PAGE3Q5JUK9 113 aa2.75□□□□□ -1.97
PDLIM5-218ENST00000513341 TPTE2P1Q5T6R2 138 aa2.75□□□□□ -1.97
PDLIM5-218ENST00000513341 DLEU7Q6UYE1 221 aa2.75□□□□□ -1.97
PDLIM5-218ENST00000513341 KCTD8Q6ZWB6 473 aa2.75□□□□□ -1.97
PDLIM5-218ENST00000513341 GTSCR1Q86UQ5 136 aa2.75□□□□□ -1.97
PDLIM5-218ENST00000513341 ZNF573Q86YE8 665 aa2.75□□□□□ -1.97
PDLIM5-218ENST00000513341 FUNDC1Q8IVP5 155 aa2.75□□□□□ -1.97
PDLIM5-218ENST00000513341 LAX1Q8IWV1 398 aa2.75□□□□□ -1.97
PDLIM5-218ENST00000513341 OFCC1Q8IZS5 231 aa2.75□□□□□ -1.97
PDLIM5-218ENST00000513341 OR8H3Q8N146 312 aa2.75□□□□□ -1.97
PDLIM5-218ENST00000513341 FAM86B1Q8N7N1 296 aa2.75□□□□□ -1.97
PDLIM5-218ENST00000513341 POC5Q8NA72 575 aa2.75□□□□□ -1.97
PDLIM5-218ENST00000513341 OR9I1Q8NGQ6 314 aa2.75□□□□□ -1.97
PDLIM5-218ENST00000513341 OR13C2Q8NGS9 318 aa2.75□□□□□ -1.97
PDLIM5-218ENST00000513341 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.75□□□□□ -1.971e-6■■■■■ 56.2
PDLIM5-218ENST00000513341 CORO2AQ92828 525 aa2.75□□□□□ -1.97
PDLIM5-218ENST00000513341 SLAMF6Q96DU3 332 aa2.75□□□□□ -1.97
PDLIM5-218ENST00000513341 SPDL1Q96EA4 605 aa2.75□□□□□ -1.97
PDLIM5-218ENST00000513341 SAT2Q96F10 170 aaPredicted RBP2.75□□□□□ -1.97
PDLIM5-218ENST00000513341 PRRC1Q96M27 445 aa2.75□□□□□ -1.97
PDLIM5-218ENST00000513341 COPS4Q9BT78 406 aa2.75□□□□□ -1.97
PDLIM5-218ENST00000513341 TMED9Q9BVK6 235 aa2.75□□□□□ -1.97
PDLIM5-218ENST00000513341 NSRP1Q9H0G5 558 aaKnown RBP2.75□□□□□ -1.97
PDLIM5-218ENST00000513341 GAL3ST2Q9H3Q3 398 aa2.75□□□□□ -1.97
PDLIM5-218ENST00000513341 ANKRD19PQ9H560 264 aa2.75□□□□□ -1.97
PDLIM5-218ENST00000513341 IKZF5Q9H5V7 419 aa2.75□□□□□ -1.97
PDLIM5-218ENST00000513341 KAT8Q9H7Z6 458 aaKnown RBP2.75□□□□□ -1.97
PDLIM5-218ENST00000513341 NIPAL2Q9H841 368 aa2.75□□□□□ -1.97
PDLIM5-218ENST00000513341 PLEKHA1Q9HB21 404 aa2.75□□□□□ -1.97
PDLIM5-218ENST00000513341 HES4Q9HCC6 221 aa2.75□□□□□ -1.97
PDLIM5-218ENST00000513341 MRGBPQ9NV56 204 aa2.75□□□□□ -1.97
PDLIM5-218ENST00000513341 MRPL22Q9NWU5 206 aaKnown RBP2.75□□□□□ -1.97
PDLIM5-218ENST00000513341 TAS2R3Q9NYW6 316 aa2.75□□□□□ -1.97
PDLIM5-218ENST00000513341 ENPP5Q9UJA9 477 aa2.75□□□□□ -1.97
PDLIM5-218ENST00000513341 SLC22A13Q9Y226 551 aa2.75□□□□□ -1.97
PDLIM5-218ENST00000513341 POLDIP2Q9Y2S7 368 aa2.75□□□□□ -1.97
PDLIM5-218ENST00000513341 DNAH6Q9C0G6 4158 aa2.75□□□□□ -1.97
PDLIM5-218ENST00000513341 IGHV4OR15-8A0A075B7B6 117 aa2.74□□□□□ -1.97
PDLIM5-218ENST00000513341 SAA2-SAA4A0A096LPE2 208 aa2.74□□□□□ -1.97
PDLIM5-218ENST00000513341 A0A1B0GU03 582 aa2.74□□□□□ -1.97
PDLIM5-218ENST00000513341 ACOD1A6NK06 481 aa2.74□□□□□ -1.97
PDLIM5-218ENST00000513341 FAM90A26D6RGX4 464 aa2.74□□□□□ -1.97
PDLIM5-218ENST00000513341 CTDSP2O14595 271 aa2.74□□□□□ -1.97
PDLIM5-218ENST00000513341 MITFO75030 526 aaPredicted RBP2.74□□□□□ -1.97
PDLIM5-218ENST00000513341 TPPPO94811 219 aa2.74□□□□□ -1.97
PDLIM5-218ENST00000513341 BRI3O95415 125 aa2.74□□□□□ -1.97
PDLIM5-218ENST00000513341 SHBGP04278 402 aa2.74□□□□□ -1.97
PDLIM5-218ENST00000513341 HSPB1P04792 205 aaKnown RBP2.74□□□□□ -1.97
PDLIM5-218ENST00000513341 MPZP25189 248 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms