RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 WDFY2Q96P53 400 aa6.24□□□□□ -1.41
HMGXB3-204ENST00000513318 SMR3AQ99954 134 aa6.24□□□□□ -1.41
HMGXB3-204ENST00000513318 CMSS1Q9BQ75 279 aaKnown RBP6.24□□□□□ -1.41
HMGXB3-204ENST00000513318 FAAP24Q9BTP7 215 aa6.24□□□□□ -1.41
HMGXB3-204ENST00000513318 TMPRSS13Q9BYE2 586 aa6.24□□□□□ -1.41
HMGXB3-204ENST00000513318 C6orf62Q9GZU0 229 aaPredicted RBP6.24□□□□□ -1.41
HMGXB3-204ENST00000513318 NXF2Q9GZY0 626 aaKnown RBP6.24□□□□□ -1.41
HMGXB3-204ENST00000513318 GAL3ST2Q9H3Q3 398 aa6.24□□□□□ -1.41
HMGXB3-204ENST00000513318 RIMS4Q9H426 269 aaPredicted RBP6.24□□□□□ -1.41
HMGXB3-204ENST00000513318 RAB9BQ9NP90 201 aa6.24□□□□□ -1.41
HMGXB3-204ENST00000513318 C12orf4Q9NQ89 552 aa6.24□□□□□ -1.41
HMGXB3-204ENST00000513318 TMEM160Q9NX00 188 aa6.24□□□□□ -1.41
HMGXB3-204ENST00000513318 ING3Q9NXR8 418 aa6.24□□□□□ -1.41
HMGXB3-204ENST00000513318 TAS2R3Q9NYW6 316 aa6.24□□□□□ -1.41
HMGXB3-204ENST00000513318 ONECUT1Q9UBC0 465 aa6.24□□□□□ -1.41
HMGXB3-204ENST00000513318 AK3Q9UIJ7 227 aa6.24□□□□□ -1.41
HMGXB3-204ENST00000513318 AUP1Q9Y679 476 aa6.24□□□□□ -1.41
HMGXB3-204ENST00000513318 A3GALT2U3KPV4 340 aa6.24□□□□□ -1.41
HMGXB3-204ENST00000513318 TRBV6-6A0A0A6YYG2 114 aa6.23□□□□□ -1.41
HMGXB3-204ENST00000513318 TMEM238LA0A1B0GVL6 79 aa6.23□□□□□ -1.41
HMGXB3-204ENST00000513318 C17orf98A8MV24 154 aa6.23□□□□□ -1.41
HMGXB3-204ENST00000513318 FAM25AB3EWG3 89 aa6.23□□□□□ -1.41
HMGXB3-204ENST00000513318 FAM25CB3EWG5 89 aa6.23□□□□□ -1.41
HMGXB3-204ENST00000513318 FAM25GB3EWG6 89 aa6.23□□□□□ -1.41
HMGXB3-204ENST00000513318 XRCC3O43542 346 aa6.23□□□□□ -1.41
HMGXB3-204ENST00000513318 ORC5O43913 435 aa6.23□□□□□ -1.41
HMGXB3-204ENST00000513318 CLPXO76031 633 aa6.23□□□□□ -1.41
HMGXB3-204ENST00000513318 TOX4O94842 621 aa6.23□□□□□ -1.41
HMGXB3-204ENST00000513318 NAPSAO96009 420 aa6.23□□□□□ -1.41
HMGXB3-204ENST00000513318 MT-ND4P03905 459 aa6.23□□□□□ -1.41
HMGXB3-204ENST00000513318 CD3GP09693 182 aa6.23□□□□□ -1.41
HMGXB3-204ENST00000513318 MMP9P14780 707 aa6.23□□□□□ -1.41
HMGXB3-204ENST00000513318 CCL3L1P16619 93 aa6.23□□□□□ -1.41
HMGXB3-204ENST00000513318 ELK1P19419 428 aa6.23□□□□□ -1.41
HMGXB3-204ENST00000513318 HNF1AP20823 631 aa6.23□□□□□ -1.41
HMGXB3-204ENST00000513318 TALDO1P37837 337 aa6.23□□□□□ -1.41
HMGXB3-204ENST00000513318 MNDAP41218 407 aa6.23□□□□□ -1.41
HMGXB3-204ENST00000513318 DLX6P56179 175 aa6.23□□□□□ -1.41
HMGXB3-204ENST00000513318 GNG2P59768 71 aa6.23□□□□□ -1.41
HMGXB3-204ENST00000513318 ERVFRD-1P60508 538 aa6.23□□□□□ -1.41
HMGXB3-204ENST00000513318 ARF6P62330 175 aa6.23□□□□□ -1.41
HMGXB3-204ENST00000513318 PITPNAQ00169 270 aa6.23□□□□□ -1.41
HMGXB3-204ENST00000513318 ARFRP1Q13795 201 aa6.23□□□□□ -1.41
HMGXB3-204ENST00000513318 ZNF260Q3ZCT1 412 aa6.23□□□□□ -1.41
HMGXB3-204ENST00000513318 TMEM69Q5SWH9 247 aa6.23□□□□□ -1.41
HMGXB3-204ENST00000513318 C6orf183Q5T699 404 aa6.23□□□□□ -1.41
HMGXB3-204ENST00000513318 OLFML2AQ68BL7 652 aa6.23□□□□□ -1.41
HMGXB3-204ENST00000513318 RTN4RL2Q86UN3 420 aa6.23□□□□□ -1.41
HMGXB3-204ENST00000513318 LAX1Q8IWV1 398 aa6.23□□□□□ -1.41
HMGXB3-204ENST00000513318 OR13A1Q8NGR1 328 aa6.23□□□□□ -1.41
HMGXB3-204ENST00000513318 OR4K15Q8NH41 348 aa6.23□□□□□ -1.41
HMGXB3-204ENST00000513318 MRPL30Q8TCC3 161 aaKnown RBP6.23□□□□□ -1.41
HMGXB3-204ENST00000513318 MRGPRDQ8TDS7 321 aa6.23□□□□□ -1.41
HMGXB3-204ENST00000513318 UPRTQ96BW1 309 aa6.23□□□□□ -1.41
HMGXB3-204ENST00000513318 SIRPDQ9H106 197 aa6.23□□□□□ -1.41
HMGXB3-204ENST00000513318 MMP27Q9H306 513 aa6.23□□□□□ -1.41
HMGXB3-204ENST00000513318 C7orf69Q9H7B7 122 aa6.23□□□□□ -1.41
HMGXB3-204ENST00000513318 METTL8Q9H825 291 aaKnown RBP6.23□□□□□ -1.41
HMGXB3-204ENST00000513318 UNKLQ9H9P5 680 aaKnown RBP6.23□□□□□ -1.41
HMGXB3-204ENST00000513318 ZMAT3Q9HA38 289 aaKnown RBP6.23□□□□□ -1.41
HMGXB3-204ENST00000513318 CHMP1AQ9HD42 196 aaPredicted RBP6.23□□□□□ -1.41
HMGXB3-204ENST00000513318 YAE1D1Q9NRH1 226 aa6.23□□□□□ -1.41
HMGXB3-204ENST00000513318 MBNL3Q9NUK0 354 aaKnown RBP6.23□□□□□ -1.41
HMGXB3-204ENST00000513318 CALYQ9NYX4 217 aa6.23□□□□□ -1.41
HMGXB3-204ENST00000513318 OPN4Q9UHM6 478 aa6.23□□□□□ -1.41
HMGXB3-204ENST00000513318 TRAPPC2LQ9UL33 140 aa6.23□□□□□ -1.41
HMGXB3-204ENST00000513318 MGAT4AQ9UM21 535 aa6.23□□□□□ -1.41
HMGXB3-204ENST00000513318 KCNK7Q9Y2U2 307 aa6.23□□□□□ -1.41
HMGXB3-204ENST00000513318 NSD1Q96L73 2696 aaPredicted RBP6.23□□□□□ -1.41
HMGXB3-204ENST00000513318 MTORP42345 2549 aa6.22□□□□□ -1.41
HMGXB3-204ENST00000513318 TRAV18A0A075B6X5 111 aa6.22□□□□□ -1.41
HMGXB3-204ENST00000513318 TRAV40A0A0B4J280 105 aa6.22□□□□□ -1.41
HMGXB3-204ENST00000513318 KBTBD11-OT1A0A1B0GTJ5 212 aa6.22□□□□□ -1.41
HMGXB3-204ENST00000513318 MEX3AA1L020 520 aaKnown RBP6.22□□□□□ -1.41
HMGXB3-204ENST00000513318 TMEM235A6NFC5 223 aa6.22□□□□□ -1.41
HMGXB3-204ENST00000513318 CTDSP2O14595 271 aa6.22□□□□□ -1.41
HMGXB3-204ENST00000513318 TPPPO94811 219 aa6.22□□□□□ -1.41
HMGXB3-204ENST00000513318 MELTFP08582 738 aa6.22□□□□□ -1.41
HMGXB3-204ENST00000513318 CGB3P0DN86 165 aa6.22□□□□□ -1.41
HMGXB3-204ENST00000513318 CGB7P0DN87 165 aa6.22□□□□□ -1.41
HMGXB3-204ENST00000513318 IGHV1-8P0DP01 117 aa6.22□□□□□ -1.41
HMGXB3-204ENST00000513318 GZMHP20718 246 aa6.22□□□□□ -1.41
HMGXB3-204ENST00000513318 DTYMKP23919 212 aa6.22□□□□□ -1.41
HMGXB3-204ENST00000513318 S100A5P33763 92 aa6.22□□□□□ -1.41
HMGXB3-204ENST00000513318 SSTR5P35346 364 aa6.22□□□□□ -1.41
HMGXB3-204ENST00000513318 TAS2R20P59543 309 aa6.22□□□□□ -1.41
HMGXB3-204ENST00000513318 HLA-DRB3P79483 266 aa6.22□□□□□ -1.41
HMGXB3-204ENST00000513318 C17orf58Q2M2W7 97 aa6.22□□□□□ -1.41
HMGXB3-204ENST00000513318 TMEM30BQ3MIR4 351 aa6.22□□□□□ -1.41
HMGXB3-204ENST00000513318 CDNFQ49AH0 187 aa6.22□□□□□ -1.41
HMGXB3-204ENST00000513318 HACD4Q5VWC8 232 aa6.22□□□□□ -1.41
HMGXB3-204ENST00000513318 NCR3LG1Q68D85 454 aa6.22□□□□□ -1.41
HMGXB3-204ENST00000513318 ZNF880Q6PDB4 577 aa6.22□□□□□ -1.41
HMGXB3-204ENST00000513318 BAIAP2L2Q6UXY1 529 aa6.22□□□□□ -1.41
HMGXB3-204ENST00000513318 HEPN1Q6WQI6 88 aa6.22□□□□□ -1.41
HMGXB3-204ENST00000513318 VMO1Q7Z5L0 202 aa6.22□□□□□ -1.41
HMGXB3-204ENST00000513318 Q8N7P7 452 aa6.22□□□□□ -1.41
HMGXB3-204ENST00000513318 OR10A7Q8NGE5 316 aa6.22□□□□□ -1.41
HMGXB3-204ENST00000513318 CCDC107Q8WV48 283 aa6.22□□□□□ -1.41
HMGXB3-204ENST00000513318 CYYR1Q96J86 154 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms